RNA–Protein interactions for RNA: ENST00000559119.1

VPS13C-208, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 738 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-208ENST00000559119 ANGPTL5Q86XS5 388 aa2.18□□□□□ -2.06
VPS13C-208ENST00000559119 CBWD2Q8IUF1 395 aa2.18□□□□□ -2.06
VPS13C-208ENST00000559119 MISPQ8IVT2 679 aa2.18□□□□□ -2.06
VPS13C-208ENST00000559119 DAW1Q8N136 415 aa2.18□□□□□ -2.06
VPS13C-208ENST00000559119 SVBPQ8N300 66 aa2.18□□□□□ -2.06
VPS13C-208ENST00000559119 Q8N402 240 aa2.18□□□□□ -2.06
VPS13C-208ENST00000559119 SPICQ8N5J4 248 aa2.18□□□□□ -2.06
VPS13C-208ENST00000559119 PQLC3Q8N755 202 aa2.18□□□□□ -2.06
VPS13C-208ENST00000559119 C15orf54Q8N8G6 183 aa2.18□□□□□ -2.06
VPS13C-208ENST00000559119 TMEM161BQ8NDZ6 487 aa2.18□□□□□ -2.06
VPS13C-208ENST00000559119 OR11H7Q8NGC8 314 aa2.18□□□□□ -2.06
VPS13C-208ENST00000559119 OR51G1Q8NGK1 321 aa2.18□□□□□ -2.06
VPS13C-208ENST00000559119 OR1S1Q8NH92 325 aa2.18□□□□□ -2.06
VPS13C-208ENST00000559119 TCTEX1D2Q8WW35 142 aa2.18□□□□□ -2.06
VPS13C-208ENST00000559119 APH1BQ8WW43 257 aa2.18□□□□□ -2.06
VPS13C-208ENST00000559119 SLC5A11Q8WWX8 675 aa2.18□□□□□ -2.06
VPS13C-208ENST00000559119 ACOT12Q8WYK0 555 aa2.18□□□□□ -2.06
VPS13C-208ENST00000559119 THRSPQ92748 146 aa2.18□□□□□ -2.06
VPS13C-208ENST00000559119 EXOSC8Q96B26 276 aaKnown RBP2.18□□□□□ -2.06
VPS13C-208ENST00000559119 TCEAL4Q96EI5 215 aa2.18□□□□□ -2.06
VPS13C-208ENST00000559119 DIRAS2Q96HU8 199 aa2.18□□□□□ -2.06
VPS13C-208ENST00000559119 PYURFQ96I23 114 aa2.18□□□□□ -2.06
VPS13C-208ENST00000559119 C14orf144Q96I85 54 aa2.18□□□□□ -2.06
VPS13C-208ENST00000559119 ZBED3Q96IU2 234 aaPredicted RBP2.18□□□□□ -2.06
VPS13C-208ENST00000559119 FCRL1Q96LA6 429 aa2.18□□□□□ -2.06
VPS13C-208ENST00000559119 OR2A7Q96R45 310 aa2.18□□□□□ -2.06
VPS13C-208ENST00000559119 MGLLQ99685 303 aa2.18□□□□□ -2.06
VPS13C-208ENST00000559119 CBWD1Q9BRT8 395 aa2.18□□□□□ -2.06
VPS13C-208ENST00000559119 EDEM2Q9BV94 578 aa2.18□□□□□ -2.06
VPS13C-208ENST00000559119 FICDQ9BVA6 458 aa2.18□□□□□ -2.06
VPS13C-208ENST00000559119 TPPP3Q9BW30 176 aa2.18□□□□□ -2.06
VPS13C-208ENST00000559119 PRRG3Q9BZD7 231 aa2.18□□□□□ -2.06
VPS13C-208ENST00000559119 METTL9Q9H1A3 318 aa2.18□□□□□ -2.06
VPS13C-208ENST00000559119 POMKQ9H5K3 350 aa2.18□□□□□ -2.06
VPS13C-208ENST00000559119 DHX35Q9H5Z1 703 aaKnown RBP2.18□□□□□ -2.06
VPS13C-208ENST00000559119 FAM124BQ9H5Z6 455 aaPredicted RBP2.18□□□□□ -2.06
VPS13C-208ENST00000559119 TUBA4BQ9H853 241 aa2.18□□□□□ -2.06
VPS13C-208ENST00000559119 ACTR8Q9H981 624 aa2.18□□□□□ -2.06
VPS13C-208ENST00000559119 ANKRA2Q9H9E1 313 aa2.18□□□□□ -2.06
VPS13C-208ENST00000559119 WFDC1Q9HC57 220 aa2.18□□□□□ -2.06
VPS13C-208ENST00000559119 ABCB9Q9NP78 766 aa2.18□□□□□ -2.06
VPS13C-208ENST00000559119 SLC35D1Q9NTN3 355 aa2.18□□□□□ -2.06
VPS13C-208ENST00000559119 NDUFB11Q9NX14 153 aa2.18□□□□□ -2.06
VPS13C-208ENST00000559119 SOHLH2Q9NX45 425 aa2.18□□□□□ -2.06
VPS13C-208ENST00000559119 FBXL3Q9UKT7 428 aa2.18□□□□□ -2.06
VPS13C-208ENST00000559119 NDRG2Q9UN36 371 aaKnown RBP2.18□□□□□ -2.06
VPS13C-208ENST00000559119 TP53TG5Q9Y2B4 290 aa2.18□□□□□ -2.06
VPS13C-208ENST00000559119 CARHSP1Q9Y2V2 147 aaKnown RBP2.18□□□□□ -2.06
VPS13C-208ENST00000559119 LSM2Q9Y333 95 aaKnown RBP2.18□□□□□ -2.06
VPS13C-208ENST00000559119 LTN1O94822 1766 aa2.18□□□□□ -2.06
VPS13C-208ENST00000559119 UBR2Q8IWV8 1755 aa2.18□□□□□ -2.06
VPS13C-208ENST00000559119 NRAPQ86VF7 1730 aa2.17□□□□□ -2.06
VPS13C-208ENST00000559119 SLX4Q8IY92 1834 aa2.17□□□□□ -2.06
VPS13C-208ENST00000559119 IGLV3-22A0A075B6J6 115 aa2.17□□□□□ -2.06
VPS13C-208ENST00000559119 A0A087WZY1 265 aa2.17□□□□□ -2.06
VPS13C-208ENST00000559119 A0A096LPI6 279 aa2.17□□□□□ -2.06
VPS13C-208ENST00000559119 LOC285095A0A1B0GVY8 99 aa2.17□□□□□ -2.06
VPS13C-208ENST00000559119 FAM230AA0A1W2PPH8 454 aa2.17□□□□□ -2.06
VPS13C-208ENST00000559119 A0A1W2PQL4 384 aaPredicted RBP2.17□□□□□ -2.06
VPS13C-208ENST00000559119 OR6C74A6NCV1 312 aa2.17□□□□□ -2.06
VPS13C-208ENST00000559119 RFPL4AA6NLU0 287 aa2.17□□□□□ -2.06
VPS13C-208ENST00000559119 TMEM210A6NLX4 147 aa2.17□□□□□ -2.06
VPS13C-208ENST00000559119 GJE1A6NN92 205 aa2.17□□□□□ -2.06
VPS13C-208ENST00000559119 A8MT66 165 aa2.17□□□□□ -2.06
VPS13C-208ENST00000559119 C1orf196B1AJZ1 125 aa2.17□□□□□ -2.06
VPS13C-208ENST00000559119 MCRIP1C9JLW8 97 aa2.17□□□□□ -2.06
VPS13C-208ENST00000559119 RFPL4AL1F8VTS6 287 aa2.17□□□□□ -2.06
VPS13C-208ENST00000559119 MKRN2OSH3BPM6 223 aa2.17□□□□□ -2.06
VPS13C-208ENST00000559119 SMLR1H3BR10 107 aa2.17□□□□□ -2.06
VPS13C-208ENST00000559119 L7N2F9 121 aa2.17□□□□□ -2.06
VPS13C-208ENST00000559119 LGALS8O00214 317 aa2.17□□□□□ -2.06
VPS13C-208ENST00000559119 CXCR6O00574 342 aa2.17□□□□□ -2.06
VPS13C-208ENST00000559119 AZIN1O14977 448 aa2.17□□□□□ -2.06
VPS13C-208ENST00000559119 PRKYO43930 277 aa2.17□□□□□ -2.06
VPS13C-208ENST00000559119 RDH16O75452 317 aa2.17□□□□□ -2.06
VPS13C-208ENST00000559119 RP2O75695 350 aa2.17□□□□□ -2.06
VPS13C-208ENST00000559119 GADD45GO95257 159 aa2.17□□□□□ -2.06
VPS13C-208ENST00000559119 AP2A1O95782 977 aa2.17□□□□□ -2.06
VPS13C-208ENST00000559119 PTHP01270 115 aa2.17□□□□□ -2.06
VPS13C-208ENST00000559119 IGHV2-5P01817 119 aa2.17□□□□□ -2.06
VPS13C-208ENST00000559119 CRYBA1P05813 215 aa2.17□□□□□ -2.06
VPS13C-208ENST00000559119 CRHP06850 196 aa2.17□□□□□ -2.06
VPS13C-208ENST00000559119 KLK3P07288 261 aaPredicted RBP2.17□□□□□ -2.06
VPS13C-208ENST00000559119 GIPP09681 153 aaPredicted RBP2.17□□□□□ -2.06
VPS13C-208ENST00000559119 LINC00614P0C842 121 aa2.17□□□□□ -2.06
VPS13C-208ENST00000559119 UBBP0CG47 229 aa2.17□□□□□ -2.06
VPS13C-208ENST00000559119 UBCP0CG48 685 aaKnown RBP2.17□□□□□ -2.06
VPS13C-208ENST00000559119 CALCBP10092 127 aa2.17□□□□□ -2.06
VPS13C-208ENST00000559119 COX5BP10606 129 aa2.17□□□□□ -2.06
VPS13C-208ENST00000559119 ANXA8P13928 327 aa2.17□□□□□ -2.06
VPS13C-208ENST00000559119 GABRA1P14867 456 aa2.17□□□□□ -2.06
VPS13C-208ENST00000559119 IGFBP3P17936 291 aaPredicted RBP2.17□□□□□ -2.06
VPS13C-208ENST00000559119 NPR2P20594 1047 aa2.17□□□□□ -2.06
VPS13C-208ENST00000559119 OGNP20774 298 aaKnown RBP2.17□□□□□ -2.06
VPS13C-208ENST00000559119 S100A11P31949 105 aa2.17□□□□□ -2.06
VPS13C-208ENST00000559119 CCR7P32248 378 aa2.17□□□□□ -2.06
VPS13C-208ENST00000559119 MAS1LP35410 378 aa2.17□□□□□ -2.06
VPS13C-208ENST00000559119 RPL4P36578 427 aaKnown RBP2.17□□□□□ -2.06
VPS13C-208ENST00000559119 PTGFRP43088 359 aa2.17□□□□□ -2.06
VPS13C-208ENST00000559119 RFX3P48380 749 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms