RNA–Protein interactions for RNA: ENST00000558924.1

SEC11A-206, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 1 (best)

Gene SEC11A, Length 3,626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-206ENST00000558924 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.74□□□□□ -0.69
SEC11A-206ENST00000558924 GDF2Q9UK05 429 aaPredicted RBP10.74□□□□□ -0.69
SEC11A-206ENST00000558924 CARHSP1Q9Y2V2 147 aaKnown RBP10.74□□□□□ -0.69
SEC11A-206ENST00000558924 DOCK10Q96BY6 2186 aa10.74□□□□□ -0.69
SEC11A-206ENST00000558924 SHANK1Q9Y566 2161 aa10.74□□□□□ -0.69
SEC11A-206ENST00000558924 A0A1B0GTQ1 180 aa10.73□□□□□ -0.69
SEC11A-206ENST00000558924 FAM230AA0A1W2PPH8 454 aa10.73□□□□□ -0.69
SEC11A-206ENST00000558924 PPIHO43447 177 aaKnown RBP10.73□□□□□ -0.69
SEC11A-206ENST00000558924 NDUFA6P56556 154 aa10.73□□□□□ -0.69
SEC11A-206ENST00000558924 DCAF7P61962 342 aa10.73□□□□□ -0.69
SEC11A-206ENST00000558924 C4orf17Q53FE4 359 aa10.73□□□□□ -0.69
SEC11A-206ENST00000558924 TMEM217Q8N7C4 229 aa10.73□□□□□ -0.69
SEC11A-206ENST00000558924 PNLDC1Q8NA58 520 aaKnown RBP10.73□□□□□ -0.69
SEC11A-206ENST00000558924 APCDD1LQ8NCL9 501 aa10.73□□□□□ -0.69
SEC11A-206ENST00000558924 MAFAQ8NHW3 353 aaPredicted RBP10.73□□□□□ -0.69
SEC11A-206ENST00000558924 MUC22E2RYF6 1773 aaPredicted RBP10.73□□□□□ -0.69
SEC11A-206ENST00000558924 QDPRP09417 244 aa10.73□□□□□ -0.69
SEC11A-206ENST00000558924 SLC25A1P53007 311 aa10.73□□□□□ -0.69
SEC11A-206ENST00000558924 DRAM2Q6UX65 266 aa10.73□□□□□ -0.69
SEC11A-206ENST00000558924 YRDCQ86U90 279 aaKnown RBP10.73□□□□□ -0.69
SEC11A-206ENST00000558924 OR5D14Q8NGL3 314 aa10.73□□□□□ -0.69
SEC11A-206ENST00000558924 OR10D4PQ8NGN7 298 aa10.73□□□□□ -0.69
SEC11A-206ENST00000558924 HDHD3Q9BSH5 251 aaPredicted RBP10.73□□□□□ -0.69
SEC11A-206ENST00000558924 MRI1Q9BV20 369 aa10.73□□□□□ -0.69
SEC11A-206ENST00000558924 OR51B6Q9H340 312 aa10.73□□□□□ -0.69
SEC11A-206ENST00000558924 SMCO4Q9NRQ5 59 aa10.73□□□□□ -0.69
SEC11A-206ENST00000558924 NXT1Q9UKK6 140 aaKnown RBP10.73□□□□□ -0.69
SEC11A-206ENST00000558924 C14orf166Q9Y224 244 aaKnown RBP10.73□□□□□ -0.69
SEC11A-206ENST00000558924 DMRT1Q9Y5R6 373 aa10.73□□□□□ -0.69
SEC11A-206ENST00000558924 NCOA6Q14686 2063 aaPredicted RBP10.73□□□□□ -0.69
SEC11A-206ENST00000558924 ZFHX2Q9C0A1 2572 aaPredicted RBP10.73□□□□□ -0.69
SEC11A-206ENST00000558924 FREM1Q5H8C1 2179 aa10.73□□□□□ -0.69
SEC11A-206ENST00000558924 K7EPK0 472 aa10.73□□□□□ -0.69
SEC11A-206ENST00000558924 TSPAN2O60636 221 aa10.73□□□□□ -0.69
SEC11A-206ENST00000558924 ZFAND5O76080 213 aa10.73□□□□□ -0.69
SEC11A-206ENST00000558924 FOSL2P15408 326 aa10.73□□□□□ -0.69
SEC11A-206ENST00000558924 GABRA4P48169 554 aa10.73□□□□□ -0.69
SEC11A-206ENST00000558924 RRADP55042 308 aa10.73□□□□□ -0.69
SEC11A-206ENST00000558924 MST1LQ2TV78 715 aa10.73□□□□□ -0.69
SEC11A-206ENST00000558924 UQCC3Q6UW78 93 aa10.73□□□□□ -0.69
SEC11A-206ENST00000558924 FAM71E2Q8N5Q1 922 aa10.73□□□□□ -0.69
SEC11A-206ENST00000558924 ALKBH4Q9NXW9 302 aa10.73□□□□□ -0.69
SEC11A-206ENST00000558924 TREM2Q9NZC2 230 aa10.73□□□□□ -0.69
SEC11A-206ENST00000558924 WASF3Q9UPY6 502 aa10.73□□□□□ -0.69
SEC11A-206ENST00000558924 OR8U9P0C7N5 309 aa10.72□□□□□ -0.69
SEC11A-206ENST00000558924 IGLV3-21P80748 117 aaPredicted RBP10.72□□□□□ -0.69
SEC11A-206ENST00000558924 SMAD4Q13485 552 aaKnown RBP10.72□□□□□ -0.69
SEC11A-206ENST00000558924 HLA-BQ31612 363 aa10.72□□□□□ -0.69
SEC11A-206ENST00000558924 ZNF529Q6P280 563 aa10.72□□□□□ -0.69
SEC11A-206ENST00000558924 ZNF574Q6ZN55 896 aaPredicted RBP10.72□□□□□ -0.69
SEC11A-206ENST00000558924 ANKRD37Q7Z713 158 aa10.72□□□□□ -0.69
SEC11A-206ENST00000558924 WDFY1Q8IWB7 410 aa10.72□□□□□ -0.69
SEC11A-206ENST00000558924 ZSCAN4Q8NAM6 433 aaPredicted RBP10.72□□□□□ -0.69
SEC11A-206ENST00000558924 RNASE11Q8TAA1 199 aaKnown RBP10.72□□□□□ -0.69
SEC11A-206ENST00000558924 FAM213BQ8TBF2 198 aa10.72□□□□□ -0.69
SEC11A-206ENST00000558924 MITD1Q8WV92 249 aa10.72□□□□□ -0.69
SEC11A-206ENST00000558924 DYRK2Q92630 601 aa10.72□□□□□ -0.69
SEC11A-206ENST00000558924 SEC11CQ9BY50 192 aa10.72□□□□□ -0.69
SEC11A-206ENST00000558924 GPR84Q9NQS5 396 aa10.72□□□□□ -0.69
SEC11A-206ENST00000558924 PLEK2Q9NYT0 353 aa10.72□□□□□ -0.69
SEC11A-206ENST00000558924 DKKL1Q9UK85 242 aa10.72□□□□□ -0.69
SEC11A-206ENST00000558924 EML5Q05BV3 1969 aa10.72□□□□□ -0.69
SEC11A-206ENST00000558924 RNASEK-C17orf49H0YIS7 233 aa10.72□□□□□ -0.69
SEC11A-206ENST00000558924 HTR5AP47898 357 aa10.72□□□□□ -0.69
SEC11A-206ENST00000558924 GGTLC2Q14390 218 aa10.72□□□□□ -0.69
SEC11A-206ENST00000558924 MEF2DQ14814 521 aa10.72□□□□□ -0.69
SEC11A-206ENST00000558924 KIAA2026Q5HYC2 2103 aa10.72□□□□□ -0.69
SEC11A-206ENST00000558924 LURAP1Q96LR2 239 aa10.72□□□□□ -0.69
SEC11A-206ENST00000558924 ADAM19Q9H013 955 aa10.72□□□□□ -0.69
SEC11A-206ENST00000558924 CHST11Q9NPF2 352 aa10.72□□□□□ -0.69
SEC11A-206ENST00000558924 PLEKHJ1Q9NW61 149 aa10.72□□□□□ -0.69
SEC11A-206ENST00000558924 METTL1Q9UBP6 276 aaKnown RBP10.72□□□□□ -0.69
SEC11A-206ENST00000558924 A0A1W2PQM1 296 aa10.72□□□□□ -0.69
SEC11A-206ENST00000558924 NPIPA2E9PIF3 369 aa10.72□□□□□ -0.69
SEC11A-206ENST00000558924 NPIPA3F8WFD2 350 aa10.72□□□□□ -0.69
SEC11A-206ENST00000558924 ATXN7O15265 892 aaPredicted RBP10.72□□□□□ -0.69
SEC11A-206ENST00000558924 SLC34A2O95436 690 aa10.72□□□□□ -0.69
SEC11A-206ENST00000558924 ITGB2P05107 769 aa10.72□□□□□ -0.69
SEC11A-206ENST00000558924 CRHP06850 196 aa10.72□□□□□ -0.69
SEC11A-206ENST00000558924 DAP3P51398 398 aaKnown RBP10.72□□□□□ -0.69
SEC11A-206ENST00000558924 ACTBL2Q562R1 376 aa10.72□□□□□ -0.69
SEC11A-206ENST00000558924 AWAT1Q58HT5 328 aa10.72□□□□□ -0.69
SEC11A-206ENST00000558924 ZNF813Q6ZN06 617 aa10.72□□□□□ -0.69
SEC11A-206ENST00000558924 BEND4Q6ZU67 534 aa10.72□□□□□ -0.69
SEC11A-206ENST00000558924 DPPA2Q7Z7J5 298 aa10.72□□□□□ -0.69
SEC11A-206ENST00000558924 D2HGDHQ8N465 521 aa10.72□□□□□ -0.69
SEC11A-206ENST00000558924 ZNF561Q8N587 486 aa10.72□□□□□ -0.69
SEC11A-206ENST00000558924 LRRC75AQ8NAA5 344 aa10.72□□□□□ -0.69
SEC11A-206ENST00000558924 TMEM229BQ8NBD8 167 aa10.72□□□□□ -0.69
SEC11A-206ENST00000558924 OR5L1Q8NGL2 311 aa10.72□□□□□ -0.69
SEC11A-206ENST00000558924 OR10C1Q96KK4 312 aa10.72□□□□□ -0.69
SEC11A-206ENST00000558924 RAB33BQ9H082 229 aa10.72□□□□□ -0.69
SEC11A-206ENST00000558924 C1orf198Q9H425 327 aa10.72□□□□□ -0.69
SEC11A-206ENST00000558924 SRPK3Q9UPE1 567 aa10.72□□□□□ -0.69
SEC11A-206ENST00000558924 H3BMH7 237 aa10.71□□□□□ -0.69
SEC11A-206ENST00000558924 IGHV2-5P01817 119 aa10.71□□□□□ -0.69
SEC11A-206ENST00000558924 CSTBP04080 98 aaKnown RBP10.71□□□□□ -0.69
SEC11A-206ENST00000558924 VSIG8P0DPA2 414 aa10.71□□□□□ -0.69
SEC11A-206ENST00000558924 LPAR6P43657 344 aa10.71□□□□□ -0.69
SEC11A-206ENST00000558924 EGR3Q06889 387 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms