RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 ZNF85Q03923 595 aa9.97□□□□□ -0.81
TPM1-216ENST00000558910 SCGB2A2Q13296 93 aa9.97□□□□□ -0.81
TPM1-216ENST00000558910 SNCBQ16143 134 aa9.97□□□□□ -0.81
TPM1-216ENST00000558910 ZNF684Q5T5D7 378 aa9.97□□□□□ -0.81
TPM1-216ENST00000558910 DEGS2Q6QHC5 323 aa9.97□□□□□ -0.81
TPM1-216ENST00000558910 RBMS3Q6XE24 437 aaKnown RBP9.97□□□□□ -0.81
TPM1-216ENST00000558910 FAM220AQ7Z4H9 259 aa9.97□□□□□ -0.81
TPM1-216ENST00000558910 PQLC1Q8N2U9 271 aa9.97□□□□□ -0.81
TPM1-216ENST00000558910 TAF15Q92804 592 aaKnown RBP eCLIP9.97□□□□□ -0.81
TPM1-216ENST00000558910 RFKQ969G6 155 aa9.97□□□□□ -0.81
TPM1-216ENST00000558910 C9orf16Q9BUW7 83 aa9.97□□□□□ -0.81
TPM1-216ENST00000558910 ADI1Q9BV57 179 aa9.97□□□□□ -0.81
TPM1-216ENST00000558910 SUCNR1Q9BXA5 334 aa9.97□□□□□ -0.81
TPM1-216ENST00000558910 PLEKHA1Q9HB21 404 aa9.97□□□□□ -0.81
TPM1-216ENST00000558910 ACOXLQ9NUZ1 547 aa9.97□□□□□ -0.81
TPM1-216ENST00000558910 USE1Q9NZ43 259 aa9.97□□□□□ -0.81
TPM1-216ENST00000558910 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.97□□□□□ -0.81
TPM1-216ENST00000558910 ONECUT1Q9UBC0 465 aa9.97□□□□□ -0.81
TPM1-216ENST00000558910 NUFIP1Q9UHK0 495 aaKnown RBP9.97□□□□□ -0.81
TPM1-216ENST00000558910 NUP50Q9UKX7 468 aa9.97□□□□□ -0.81
TPM1-216ENST00000558910 SNX5Q9Y5X3 404 aa9.97□□□□□ -0.81
TPM1-216ENST00000558910 A0A1B0GVI7 797 aa9.96□□□□□ -0.82
TPM1-216ENST00000558910 J3QLW9 94 aa9.96□□□□□ -0.82
TPM1-216ENST00000558910 SYT7O43581 403 aa9.96□□□□□ -0.82
TPM1-216ENST00000558910 SRSF10O75494 262 aaKnown RBP9.96□□□□□ -0.82
TPM1-216ENST00000558910 MTRF1O75570 445 aaKnown RBP9.96□□□□□ -0.82
TPM1-216ENST00000558910 FCN3O75636 299 aa9.96□□□□□ -0.82
TPM1-216ENST00000558910 DHRS3O75911 302 aa9.96□□□□□ -0.82
TPM1-216ENST00000558910 PTBP3O95758 552 aaKnown RBP9.96□□□□□ -0.82
TPM1-216ENST00000558910 LHBP01229 141 aa9.96□□□□□ -0.82
TPM1-216ENST00000558910 OR2T7P0C7T2 308 aa9.96□□□□□ -0.82
TPM1-216ENST00000558910 ZNF19P17023 458 aa9.96□□□□□ -0.82
TPM1-216ENST00000558910 NDUFB7P17568 137 aa9.96□□□□□ -0.82
TPM1-216ENST00000558910 MTNR1AP48039 350 aa9.96□□□□□ -0.82
TPM1-216ENST00000558910 CEBPDP49716 269 aaPredicted RBP9.96□□□□□ -0.82
TPM1-216ENST00000558910 CAPZA1P52907 286 aa9.96□□□□□ -0.82
TPM1-216ENST00000558910 DLX1P56177 255 aa9.96□□□□□ -0.82
TPM1-216ENST00000558910 GNG3P63215 75 aa9.96□□□□□ -0.82
TPM1-216ENST00000558910 PAX8Q06710 450 aa9.96□□□□□ -0.82
TPM1-216ENST00000558910 EGR3Q06889 387 aa9.96□□□□□ -0.82
TPM1-216ENST00000558910 C10orf67Q8IYJ2 551 aa9.96□□□□□ -0.82
TPM1-216ENST00000558910 ELMOD2Q8IZ81 293 aa9.96□□□□□ -0.82
TPM1-216ENST00000558910 TEX29Q8N6K0 151 aa9.96□□□□□ -0.82
TPM1-216ENST00000558910 OR2T27Q8NH04 317 aa9.96□□□□□ -0.82
TPM1-216ENST00000558910 SPATA3Q8NHX4 192 aa9.96□□□□□ -0.82
TPM1-216ENST00000558910 MNTQ99583 582 aa9.96□□□□□ -0.82
TPM1-216ENST00000558910 RNPEPL1Q9HAU8 725 aa9.96□□□□□ -0.82
TPM1-216ENST00000558910 ELL3Q9HB65 397 aaPredicted RBP9.96□□□□□ -0.82
TPM1-216ENST00000558910 ESM1Q9NQ30 184 aa9.96□□□□□ -0.82
TPM1-216ENST00000558910 HAO2Q9NYQ3 351 aa9.96□□□□□ -0.82
TPM1-216ENST00000558910 KIR2DS1A0A191URI9 304 aa9.95□□□□□ -0.82
TPM1-216ENST00000558910 A0A1B0GTI1 187 aa9.95□□□□□ -0.82
TPM1-216ENST00000558910 ACOD1A6NK06 481 aa9.95□□□□□ -0.82
TPM1-216ENST00000558910 TMEM210A6NLX4 147 aa9.95□□□□□ -0.82
TPM1-216ENST00000558910 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.95□□□□□ -0.82
TPM1-216ENST00000558910 NDUFB3O43676 98 aa9.95□□□□□ -0.82
TPM1-216ENST00000558910 SYNGR1O43759 233 aa9.95□□□□□ -0.82
TPM1-216ENST00000558910 ENSAO43768 121 aaKnown RBP9.95□□□□□ -0.82
TPM1-216ENST00000558910 CLIC3O95833 236 aa9.95□□□□□ -0.82
TPM1-216ENST00000558910 HAAOP46952 286 aa9.95□□□□□ -0.82
TPM1-216ENST00000558910 OR12D2P58182 307 aa9.95□□□□□ -0.82
TPM1-216ENST00000558910 PAX2Q02962 417 aa9.95□□□□□ -0.82
TPM1-216ENST00000558910 BAMBIQ13145 260 aa9.95□□□□□ -0.82
TPM1-216ENST00000558910 CEACAM21Q3KPI0 293 aa9.95□□□□□ -0.82
TPM1-216ENST00000558910 CLVS2Q5SYC1 327 aa9.95□□□□□ -0.82
TPM1-216ENST00000558910 TEX36Q5VZQ5 186 aa9.95□□□□□ -0.82
TPM1-216ENST00000558910 LPCAT4Q643R3 524 aa9.95□□□□□ -0.82
TPM1-216ENST00000558910 LHFPL3Q86UP9 236 aa9.95□□□□□ -0.82
TPM1-216ENST00000558910 CATSPERDQ86XM0 798 aa9.95□□□□□ -0.82
TPM1-216ENST00000558910 ANGPTL5Q86XS5 388 aa9.95□□□□□ -0.82
TPM1-216ENST00000558910 ENTHD1Q8IYW4 607 aa9.95□□□□□ -0.82
TPM1-216ENST00000558910 PRSS35Q8N3Z0 413 aa9.95□□□□□ -0.82
TPM1-216ENST00000558910 TMEM185AQ8NFB2 350 aa9.95□□□□□ -0.82
TPM1-216ENST00000558910 OR14K1Q8NGZ2 314 aa9.95□□□□□ -0.82
TPM1-216ENST00000558910 CYGBQ8WWM9 190 aa9.95□□□□□ -0.82
TPM1-216ENST00000558910 RORBQ92753 470 aa9.95□□□□□ -0.82
TPM1-216ENST00000558910 LHX4Q969G2 390 aa9.95□□□□□ -0.82
TPM1-216ENST00000558910 HRASLS5Q96KN8 279 aa9.95□□□□□ -0.82
TPM1-216ENST00000558910 ZNF48Q96MX3 618 aaPredicted RBP9.95□□□□□ -0.82
TPM1-216ENST00000558910 TRIM36Q9NQ86 728 aa9.95□□□□□ -0.82
TPM1-216ENST00000558910 OR14J1Q9UGF5 321 aa9.95□□□□□ -0.82
TPM1-216ENST00000558910 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.95□□□□□ -0.82
TPM1-216ENST00000558910 PPIAL4CA0A0B4J2A2 164 aa9.94□□□□□ -0.82
TPM1-216ENST00000558910 LOC100130705A0A1B0GUX0 176 aa9.94□□□□□ -0.82
TPM1-216ENST00000558910 LOC107986453A0A1B0GWG9 222 aa9.94□□□□□ -0.82
TPM1-216ENST00000558910 MEX3AA1L020 520 aaKnown RBP9.94□□□□□ -0.82
TPM1-216ENST00000558910 NKX6-3A6NJ46 265 aa9.94□□□□□ -0.82
TPM1-216ENST00000558910 SRRM5B3KS81 715 aa9.94□□□□□ -0.82
TPM1-216ENST00000558910 TOX4O94842 621 aa9.94□□□□□ -0.82
TPM1-216ENST00000558910 FSHBP01225 129 aa9.94□□□□□ -0.82
TPM1-216ENST00000558910 CALCBP10092 127 aa9.94□□□□□ -0.82
TPM1-216ENST00000558910 AMY2BP19961 511 aa9.94□□□□□ -0.82
TPM1-216ENST00000558910 DCTDP32321 178 aa9.94□□□□□ -0.82
TPM1-216ENST00000558910 KIR3DL2P43630 455 aa9.94□□□□□ -0.82
TPM1-216ENST00000558910 SNU13P55769 128 aaKnown RBP9.94□□□□□ -0.82
TPM1-216ENST00000558910 ZNF91Q05481 1191 aa9.94□□□□□ -0.82
TPM1-216ENST00000558910 METTL11BQ5VVY1 283 aa9.94□□□□□ -0.82
TPM1-216ENST00000558910 CD276Q5ZPR3 534 aa9.94□□□□□ -0.82
TPM1-216ENST00000558910 DOK3Q7L591 496 aa9.94□□□□□ -0.82
TPM1-216ENST00000558910 SLC36A1Q7Z2H8 476 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms