RNA–Protein interactions for RNA: ENST00000558469.5

CUX1-216, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-216ENST00000558469 RAB1BQ9H0U4 201 aa8.15□□□□□ -1.1
CUX1-216ENST00000558469 SAP30LQ9HAJ7 183 aa8.15□□□□□ -1.1
CUX1-216ENST00000558469 AK6Q9Y3D8 172 aaKnown RBP8.15□□□□□ -1.1
CUX1-216ENST00000558469 ANKRD17O75179 2603 aaKnown RBP8.15□□□□□ -1.11
CUX1-216ENST00000558469 HECTD1Q9ULT8 2610 aa8.14□□□□□ -1.11
CUX1-216ENST00000558469 SMIM30A4D0T7 59 aa8.14□□□□□ -1.11
CUX1-216ENST00000558469 MEGF11A6BM72 1044 aa8.14□□□□□ -1.11
CUX1-216ENST00000558469 OR5B21A6NL26 309 aa8.14□□□□□ -1.11
CUX1-216ENST00000558469 TMEM210A6NLX4 147 aa8.14□□□□□ -1.11
CUX1-216ENST00000558469 H7C417 338 aa8.14□□□□□ -1.11
CUX1-216ENST00000558469 OVOL3O00110 214 aa8.14□□□□□ -1.11
CUX1-216ENST00000558469 PDCD5O14737 125 aa8.14□□□□□ -1.11
CUX1-216ENST00000558469 ST8SIA5O15466 376 aa8.14□□□□□ -1.11
CUX1-216ENST00000558469 NCR1O76036 304 aa8.14□□□□□ -1.11
CUX1-216ENST00000558469 PLATP00750 562 aa8.14□□□□□ -1.11
CUX1-216ENST00000558469 ALDOBP05062 364 aa8.14□□□□□ -1.11
CUX1-216ENST00000558469 CD55P08174 381 aa8.14□□□□□ -1.11
CUX1-216ENST00000558469 CLEC2LP0C7M8 214 aa8.14□□□□□ -1.11
CUX1-216ENST00000558469 TNFRSF1AP19438 455 aa8.14□□□□□ -1.11
CUX1-216ENST00000558469 RAB3BP20337 219 aa8.14□□□□□ -1.11
CUX1-216ENST00000558469 ZNF93P35789 620 aaPredicted RBP8.14□□□□□ -1.11
CUX1-216ENST00000558469 HAAOP46952 286 aa8.14□□□□□ -1.11
CUX1-216ENST00000558469 SERPINB10P48595 397 aa8.14□□□□□ -1.11
CUX1-216ENST00000558469 KISS1Q15726 138 aa8.14□□□□□ -1.11
CUX1-216ENST00000558469 MPPED2Q15777 294 aa8.14□□□□□ -1.11
CUX1-216ENST00000558469 FAM209AQ5JX71 171 aa8.14□□□□□ -1.11
CUX1-216ENST00000558469 ANGPTL5Q86XS5 388 aa8.14□□□□□ -1.11
CUX1-216ENST00000558469 JAGN1Q8N5M9 183 aa8.14□□□□□ -1.11
CUX1-216ENST00000558469 CELF2-AS1Q8N7Q2 184 aa8.14□□□□□ -1.11
CUX1-216ENST00000558469 ZNF420Q8TAQ5 688 aaPredicted RBP8.14□□□□□ -1.11
CUX1-216ENST00000558469 NDNFQ8TB73 568 aa8.14□□□□□ -1.11
CUX1-216ENST00000558469 IGFBPL1Q8WX77 278 aa8.14□□□□□ -1.11
CUX1-216ENST00000558469 SORCS2Q96PQ0 1159 aa8.14□□□□□ -1.11
CUX1-216ENST00000558469 GFI1Q99684 422 aa8.14□□□□□ -1.11
CUX1-216ENST00000558469 RBM38Q9H0Z9 239 aaKnown RBP8.14□□□□□ -1.11
CUX1-216ENST00000558469 OR51I2Q9H344 312 aa8.14□□□□□ -1.11
CUX1-216ENST00000558469 CXorf56Q9H5V9 222 aa8.14□□□□□ -1.11
CUX1-216ENST00000558469 UFSP2Q9NUQ7 469 aa8.14□□□□□ -1.11
CUX1-216ENST00000558469 TREM2Q9NZC2 230 aa8.14□□□□□ -1.11
CUX1-216ENST00000558469 NDUFA13Q9P0J0 144 aa8.14□□□□□ -1.11
CUX1-216ENST00000558469 USF3Q68DE3 2245 aa8.13□□□□□ -1.11
CUX1-216ENST00000558469 SMIM31A0A1B0GVY4 71 aa8.13□□□□□ -1.11
CUX1-216ENST00000558469 LRP5LA4QPB2 252 aa8.13□□□□□ -1.11
CUX1-216ENST00000558469 A6NLC8 198 aa8.13□□□□□ -1.11
CUX1-216ENST00000558469 H3BMQ9 156 aa8.13□□□□□ -1.11
CUX1-216ENST00000558469 CDIPTO14735 213 aa8.13□□□□□ -1.11
CUX1-216ENST00000558469 SLC22A1O15245 554 aa8.13□□□□□ -1.11
CUX1-216ENST00000558469 SPRY1O43609 319 aaPredicted RBP8.13□□□□□ -1.11
CUX1-216ENST00000558469 HPXP02790 462 aa8.13□□□□□ -1.11
CUX1-216ENST00000558469 RBMXP38159 391 aaKnown RBP8.13□□□□□ -1.11
CUX1-216ENST00000558469 RPS19P39019 145 aaKnown RBP8.13□□□□□ -1.11
CUX1-216ENST00000558469 CAV3P56539 151 aa8.13□□□□□ -1.11
CUX1-216ENST00000558469 OR10A3P58181 314 aa8.13□□□□□ -1.11
CUX1-216ENST00000558469 ZNF154Q13106 437 aa8.13□□□□□ -1.11
CUX1-216ENST00000558469 SPCS2Q15005 226 aa8.13□□□□□ -1.11
CUX1-216ENST00000558469 TESK1Q15569 626 aa8.13□□□□□ -1.11
CUX1-216ENST00000558469 FAM76BQ5HYJ3 339 aa8.13□□□□□ -1.11
CUX1-216ENST00000558469 GLT8D1Q68CQ7 371 aa8.13□□□□□ -1.11
CUX1-216ENST00000558469 HAGHLQ6PII5 290 aaPredicted RBP8.13□□□□□ -1.11
CUX1-216ENST00000558469 CRIP3Q6Q6R5 217 aa8.13□□□□□ -1.11
CUX1-216ENST00000558469 USP43Q70EL4 1123 aa8.13□□□□□ -1.11
CUX1-216ENST00000558469 MOGAT3Q86VF5 341 aa8.13□□□□□ -1.11
CUX1-216ENST00000558469 NR2C2APQ86WQ0 139 aa8.13□□□□□ -1.11
CUX1-216ENST00000558469 ZNF573Q86YE8 665 aa8.13□□□□□ -1.11
CUX1-216ENST00000558469 CALHM1Q8IU99 346 aa8.13□□□□□ -1.11
CUX1-216ENST00000558469 NKAIN3Q8N8D7 197 aa8.13□□□□□ -1.11
CUX1-216ENST00000558469 SCCPDHQ8NBX0 429 aa8.13□□□□□ -1.11
CUX1-216ENST00000558469 OR5D18Q8NGL1 313 aa8.13□□□□□ -1.11
CUX1-216ENST00000558469 C12orf43Q96C57 262 aaKnown RBP8.13□□□□□ -1.11
CUX1-216ENST00000558469 CPNE2Q96FN4 548 aaPredicted RBP8.13□□□□□ -1.11
CUX1-216ENST00000558469 BCL7BQ9BQE9 202 aa8.13□□□□□ -1.11
CUX1-216ENST00000558469 METTL17Q9H7H0 456 aaPredicted RBP8.13□□□□□ -1.11
CUX1-216ENST00000558469 CNTD2Q9H8S5 307 aa8.13□□□□□ -1.11
CUX1-216ENST00000558469 GCM1Q9NP62 436 aa8.13□□□□□ -1.11
CUX1-216ENST00000558469 C1orf123Q9NWV4 160 aa8.13□□□□□ -1.11
CUX1-216ENST00000558469 RSL24D1Q9UHA3 163 aaKnown RBP8.13□□□□□ -1.11
CUX1-216ENST00000558469 EDARQ9UNE0 448 aa8.13□□□□□ -1.11
CUX1-216ENST00000558469 PPP1R3CQ9UQK1 317 aa8.13□□□□□ -1.11
CUX1-216ENST00000558469 PLEKHA6Q9Y2H5 1048 aa8.13□□□□□ -1.11
CUX1-216ENST00000558469 V9GY05 133 aa8.13□□□□□ -1.11
CUX1-216ENST00000558469 ABCA12Q86UK0 2595 aa8.13□□□□□ -1.11
CUX1-216ENST00000558469 IGHV1-69-2A0A0G2JMI3 117 aa8.12□□□□□ -1.11
CUX1-216ENST00000558469 hCG_1807616A0A1W2PRN6 198 aa8.12□□□□□ -1.11
CUX1-216ENST00000558469 A6NHS1 94 aa8.12□□□□□ -1.11
CUX1-216ENST00000558469 TRIM64BA6NI03 449 aa8.12□□□□□ -1.11
CUX1-216ENST00000558469 J3QL48 77 aa8.12□□□□□ -1.11
CUX1-216ENST00000558469 CDC14BO60729 498 aa8.12□□□□□ -1.11
CUX1-216ENST00000558469 NDUFS7O75251 213 aa8.12□□□□□ -1.11
CUX1-216ENST00000558469 RHBDL1O75783 438 aa8.12□□□□□ -1.11
CUX1-216ENST00000558469 LY6HO94772 140 aa8.12□□□□□ -1.11
CUX1-216ENST00000558469 PTBP3O95758 552 aaKnown RBP8.12□□□□□ -1.11
CUX1-216ENST00000558469 F12P00748 615 aaPredicted RBP8.12□□□□□ -1.11
CUX1-216ENST00000558469 IL1AP01583 271 aa8.12□□□□□ -1.11
CUX1-216ENST00000558469 TMEM225BP0DP42 221 aa8.12□□□□□ -1.11
CUX1-216ENST00000558469 PMELP40967 661 aa8.12□□□□□ -1.11
CUX1-216ENST00000558469 PTGFRP43088 359 aa8.12□□□□□ -1.11
CUX1-216ENST00000558469 GATA4P43694 442 aa8.12□□□□□ -1.11
CUX1-216ENST00000558469 OR3A4PP47883 348 aa8.12□□□□□ -1.11
CUX1-216ENST00000558469 POU3F4P49335 361 aa8.12□□□□□ -1.11
CUX1-216ENST00000558469 PSMD7P51665 324 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms