RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 MOB3CQ70IA8 216 aa9.17□□□□□ -0.94
TPM1-210ENST00000558264 ALX4Q9H161 411 aaPredicted RBP9.17□□□□□ -0.94
TPM1-210ENST00000558264 LDAHQ9H6V9 325 aa9.17□□□□□ -0.94
TPM1-210ENST00000558264 ZNF629Q9UEG4 869 aaPredicted RBP9.17□□□□□ -0.94
TPM1-210ENST00000558264 MRPS18CQ9Y3D5 142 aaKnown RBP9.17□□□□□ -0.94
TPM1-210ENST00000558264 TRAV14DV4A0A0A6YYC5 116 aa9.17□□□□□ -0.94
TPM1-210ENST00000558264 C9orf170A2RU37 121 aa9.17□□□□□ -0.94
TPM1-210ENST00000558264 C5orf49A4QMS7 147 aa9.17□□□□□ -0.94
TPM1-210ENST00000558264 WISP2O76076 250 aa9.17□□□□□ -0.94
TPM1-210ENST00000558264 NRASP01111 189 aa9.17□□□□□ -0.94
TPM1-210ENST00000558264 CSTBP04080 98 aaKnown RBP9.17□□□□□ -0.94
TPM1-210ENST00000558264 UBBP0CG47 229 aa9.17□□□□□ -0.94
TPM1-210ENST00000558264 ZBTB25P24278 435 aa9.17□□□□□ -0.94
TPM1-210ENST00000558264 RRADP55042 308 aa9.17□□□□□ -0.94
TPM1-210ENST00000558264 ARG2P78540 354 aa9.17□□□□□ -0.94
TPM1-210ENST00000558264 HLXQ14774 488 aaPredicted RBP9.17□□□□□ -0.94
TPM1-210ENST00000558264 SLC9A3R2Q15599 337 aa9.17□□□□□ -0.94
TPM1-210ENST00000558264 RIPPLY2Q5TAB7 128 aa9.17□□□□□ -0.94
TPM1-210ENST00000558264 PLCXD3Q63HM9 321 aa9.17□□□□□ -0.94
TPM1-210ENST00000558264 ALKAL2Q6UX46 152 aa9.17□□□□□ -0.94
TPM1-210ENST00000558264 LYG2Q86SG7 212 aa9.17□□□□□ -0.94
TPM1-210ENST00000558264 SLC25A42Q86VD7 318 aa9.17□□□□□ -0.94
TPM1-210ENST00000558264 BHLHE23Q8NDY6 225 aa9.17□□□□□ -0.94
TPM1-210ENST00000558264 OR5H2Q8NGV7 314 aa9.17□□□□□ -0.94
TPM1-210ENST00000558264 BORCS8Q96FH0 119 aa9.17□□□□□ -0.94
TPM1-210ENST00000558264 FAAP24Q9BTP7 215 aa9.17□□□□□ -0.94
TPM1-210ENST00000558264 PLEKHJ1Q9NW61 149 aa9.17□□□□□ -0.94
TPM1-210ENST00000558264 SLC2A8Q9NY64 477 aa9.17□□□□□ -0.94
TPM1-210ENST00000558264 EHFQ9NZC4 300 aa9.17□□□□□ -0.94
TPM1-210ENST00000558264 PRSS50Q9UI38 385 aa9.17□□□□□ -0.94
TPM1-210ENST00000558264 IGKV1-12A0A0C4DH73 117 aa9.16□□□□□ -0.94
TPM1-210ENST00000558264 EEF1E1-BLOC1S5C9J1V9 151 aa9.16□□□□□ -0.94
TPM1-210ENST00000558264 C3orf80F5H4A9 247 aa9.16□□□□□ -0.94
TPM1-210ENST00000558264 MSTNO14793 375 aa9.16□□□□□ -0.94
TPM1-210ENST00000558264 NME2P1O60361 137 aa9.16□□□□□ -0.94
TPM1-210ENST00000558264 IGKV1D-12P01611 117 aa9.16□□□□□ -0.94
TPM1-210ENST00000558264 SERPINA5P05154 406 aa9.16□□□□□ -0.94
TPM1-210ENST00000558264 NME2P22392 152 aa9.16□□□□□ -0.94
TPM1-210ENST00000558264 OR3A3P47888 321 aa9.16□□□□□ -0.94
TPM1-210ENST00000558264 OR3A2P47893 321 aa9.16□□□□□ -0.94
TPM1-210ENST00000558264 FAM89BQ8N5H3 189 aa9.16□□□□□ -0.94
TPM1-210ENST00000558264 SUMF1Q8NBK3 374 aa9.16□□□□□ -0.94
TPM1-210ENST00000558264 MDS2Q8NDY4 140 aa9.16□□□□□ -0.94
TPM1-210ENST00000558264 FER1L6-AS2Q96M78 137 aa9.16□□□□□ -0.94
TPM1-210ENST00000558264 KCNN3Q9UGI6 736 aa9.16□□□□□ -0.94
TPM1-210ENST00000558264 UBQLN2Q9UHD9 624 aa9.16□□□□□ -0.94
TPM1-210ENST00000558264 ZNF107Q9UII5 783 aaPredicted RBP9.16□□□□□ -0.94
TPM1-210ENST00000558264 GPR160Q9UJ42 338 aa9.16□□□□□ -0.94
TPM1-210ENST00000558264 ARID1AO14497 2285 aa9.16□□□□□ -0.94
TPM1-210ENST00000558264 hCG_38984A0A1B0GV85 526 aa9.16□□□□□ -0.94
TPM1-210ENST00000558264 C13orf42A0A1B0GVH6 325 aa9.16□□□□□ -0.94
TPM1-210ENST00000558264 ZNF850A8MQ14 1090 aa9.16□□□□□ -0.94
TPM1-210ENST00000558264 FOXI3A8MTJ6 420 aaPredicted RBP9.16□□□□□ -0.94
TPM1-210ENST00000558264 EFSO43281 561 aa9.16□□□□□ -0.94
TPM1-210ENST00000558264 CPT2P23786 658 aa9.16□□□□□ -0.94
TPM1-210ENST00000558264 OPRM1P35372 400 aa9.16□□□□□ -0.94
TPM1-210ENST00000558264 CCL11P51671 97 aa9.16□□□□□ -0.94
TPM1-210ENST00000558264 PCBD1P61457 104 aa9.16□□□□□ -0.94
TPM1-210ENST00000558264 IGFBP7Q16270 282 aa9.16□□□□□ -0.94
TPM1-210ENST00000558264 SIGIRRQ6IA17 410 aa9.16□□□□□ -0.94
TPM1-210ENST00000558264 TMUB2Q71RG4 321 aa9.16□□□□□ -0.94
TPM1-210ENST00000558264 MCEMP1Q8IX19 187 aa9.16□□□□□ -0.94
TPM1-210ENST00000558264 OR13G1Q8NGZ3 307 aa9.16□□□□□ -0.94
TPM1-210ENST00000558264 LEUTXA8MZ59 168 aa9.15□□□□□ -0.94
TPM1-210ENST00000558264 GEMIN2O14893 280 aaKnown RBP9.15□□□□□ -0.94
TPM1-210ENST00000558264 SFTPBP07988 381 aa9.15□□□□□ -0.94
TPM1-210ENST00000558264 FTH1P19P0C7X4 201 aa9.15□□□□□ -0.94
TPM1-210ENST00000558264 RBP2P50120 134 aa9.15□□□□□ -0.94
TPM1-210ENST00000558264 GK2Q14410 553 aaPredicted RBP9.15□□□□□ -0.94
TPM1-210ENST00000558264 CLVS2Q5SYC1 327 aa9.15□□□□□ -0.94
TPM1-210ENST00000558264 HOGA1Q86XE5 327 aa9.15□□□□□ -0.94
TPM1-210ENST00000558264 ZNF100Q8IYN0 542 aa9.15□□□□□ -0.94
TPM1-210ENST00000558264 OR5M8Q8NGP6 311 aa9.15□□□□□ -0.94
TPM1-210ENST00000558264 TERB2Q8NHR7 220 aa9.15□□□□□ -0.94
TPM1-210ENST00000558264 APH1AQ96BI3 265 aa9.15□□□□□ -0.94
TPM1-210ENST00000558264 C1QTNF6Q9BXI9 259 aa9.15□□□□□ -0.94
TPM1-210ENST00000558264 TMPRSS13Q9BYE2 586 aa9.15□□□□□ -0.94
TPM1-210ENST00000558264 C5orf66Q9H5L9 145 aa9.15□□□□□ -0.94
TPM1-210ENST00000558264 FAM86C1Q9NVL1 165 aa9.15□□□□□ -0.94
TPM1-210ENST00000558264 RDH8Q9NYR8 311 aa9.15□□□□□ -0.94
TPM1-210ENST00000558264 SPRR3Q9UBC9 169 aa9.15□□□□□ -0.94
TPM1-210ENST00000558264 KLF13Q9Y2Y9 288 aaPredicted RBP9.15□□□□□ -0.94
TPM1-210ENST00000558264 IGKV3D-15A0A087WSY6 115 aa9.15□□□□□ -0.95
TPM1-210ENST00000558264 RPS10-NUDT3A0A1W2PQS6 291 aa9.15□□□□□ -0.95
TPM1-210ENST00000558264 A0A1W2PR80 420 aa9.15□□□□□ -0.95
TPM1-210ENST00000558264 DHRS7CA6NNS2 312 aa9.15□□□□□ -0.95
TPM1-210ENST00000558264 SPDEFO95238 335 aa9.15□□□□□ -0.95
TPM1-210ENST00000558264 NGFP01138 241 aa9.15□□□□□ -0.95
TPM1-210ENST00000558264 IFNA7P01567 189 aa9.15□□□□□ -0.95
TPM1-210ENST00000558264 ZNF24P17028 368 aa9.15□□□□□ -0.95
TPM1-210ENST00000558264 WT1P19544 449 aaPredicted RBP9.15□□□□□ -0.95
TPM1-210ENST00000558264 GLRA1P23415 457 aa9.15□□□□□ -0.95
TPM1-210ENST00000558264 S100A11P31949 105 aa9.15□□□□□ -0.95
TPM1-210ENST00000558264 ATP1B3P54709 279 aa9.15□□□□□ -0.95
TPM1-210ENST00000558264 DHODHQ02127 395 aa9.15□□□□□ -0.95
TPM1-210ENST00000558264 SLC10A1Q14973 349 aa9.15□□□□□ -0.95
TPM1-210ENST00000558264 HIKESHIQ53FT3 197 aa9.15□□□□□ -0.95
TPM1-210ENST00000558264 ZNF766Q5HY98 468 aa9.15□□□□□ -0.95
TPM1-210ENST00000558264 C3P1Q6ZMU1 363 aa9.15□□□□□ -0.95
TPM1-210ENST00000558264 CALHM1Q8IU99 346 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms