RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 FUT6P51993 359 aa12.88□□□□□ -0.35
NEDD1-213ENST00000557644 HFEQ30201 348 aa12.88□□□□□ -0.35
NEDD1-213ENST00000557644 HAGHLQ6PII5 290 aaPredicted RBP12.88□□□□□ -0.35
NEDD1-213ENST00000557644 CRIP3Q6Q6R5 217 aa12.88□□□□□ -0.35
NEDD1-213ENST00000557644 OR52N4Q8NGI2 321 aa12.88□□□□□ -0.35
NEDD1-213ENST00000557644 BORCS8Q96FH0 119 aa12.88□□□□□ -0.35
NEDD1-213ENST00000557644 TECTBQ96PL2 329 aa12.88□□□□□ -0.35
NEDD1-213ENST00000557644 TMEM106BQ9NUM4 274 aa12.88□□□□□ -0.35
NEDD1-213ENST00000557644 DYSFO75923 2080 aa12.88□□□□□ -0.35
NEDD1-213ENST00000557644 CELSR1Q9NYQ6 3014 aa12.88□□□□□ -0.35
NEDD1-213ENST00000557644 hCG_1807616A0A1W2PRN6 198 aa12.88□□□□□ -0.35
NEDD1-213ENST00000557644 TMEM210A6NLX4 147 aa12.88□□□□□ -0.35
NEDD1-213ENST00000557644 ZNF205O95201 554 aa12.88□□□□□ -0.35
NEDD1-213ENST00000557644 MAS1P04201 325 aa12.88□□□□□ -0.35
NEDD1-213ENST00000557644 HCKP08631 526 aa12.88□□□□□ -0.35
NEDD1-213ENST00000557644 UCHL1P09936 223 aa12.88□□□□□ -0.35
NEDD1-213ENST00000557644 FSTP19883 344 aa12.88□□□□□ -0.35
NEDD1-213ENST00000557644 MTCP1P56278 107 aa12.88□□□□□ -0.35
NEDD1-213ENST00000557644 PPP3R1P63098 170 aa12.88□□□□□ -0.35
NEDD1-213ENST00000557644 MRPS11P82912 194 aaKnown RBP12.88□□□□□ -0.35
NEDD1-213ENST00000557644 FAM201AQ5SY85 155 aa12.88□□□□□ -0.35
NEDD1-213ENST00000557644 SPSB1Q96BD6 273 aa12.88□□□□□ -0.35
NEDD1-213ENST00000557644 FOXC2Q99958 501 aa12.88□□□□□ -0.35
NEDD1-213ENST00000557644 TLNRD1Q9H1K6 362 aa12.88□□□□□ -0.35
NEDD1-213ENST00000557644 FN3KRPQ9HA64 309 aa12.88□□□□□ -0.35
NEDD1-213ENST00000557644 CKLFQ9UBR5 152 aa12.88□□□□□ -0.35
NEDD1-213ENST00000557644 LRP5LA4QPB2 252 aa12.87□□□□□ -0.35
NEDD1-213ENST00000557644 CALRP27797 417 aaKnown RBP12.87□□□□□ -0.35
NEDD1-213ENST00000557644 RBP2P50120 134 aa12.87□□□□□ -0.35
NEDD1-213ENST00000557644 CLEC12BQ2HXU8 276 aa12.87□□□□□ -0.35
NEDD1-213ENST00000557644 HSD17B12Q53GQ0 312 aa12.87□□□□□ -0.35
NEDD1-213ENST00000557644 C22orf42Q6IC83 251 aa12.87□□□□□ -0.35
NEDD1-213ENST00000557644 WDR82Q6UXN9 313 aa12.87□□□□□ -0.35
NEDD1-213ENST00000557644 OR5D18Q8NGL1 313 aa12.87□□□□□ -0.35
NEDD1-213ENST00000557644 OR13F1Q8NGS4 319 aa12.87□□□□□ -0.35
NEDD1-213ENST00000557644 YIPF6Q96EC8 236 aa12.87□□□□□ -0.35
NEDD1-213ENST00000557644 EXOSC4Q9NPD3 245 aaKnown RBP12.87□□□□□ -0.35
NEDD1-213ENST00000557644 DLL4Q9NR61 685 aa12.87□□□□□ -0.35
NEDD1-213ENST00000557644 STUB1Q9UNE7 303 aa12.87□□□□□ -0.35
NEDD1-213ENST00000557644 TRDV1A0A1B0GX56 115 aa12.87□□□□□ -0.35
NEDD1-213ENST00000557644 SYNGR1O43759 233 aa12.87□□□□□ -0.35
NEDD1-213ENST00000557644 ALX3O95076 343 aa12.87□□□□□ -0.35
NEDD1-213ENST00000557644 SRMP19623 302 aa12.87□□□□□ -0.35
NEDD1-213ENST00000557644 PRKACBP22694 351 aa12.87□□□□□ -0.35
NEDD1-213ENST00000557644 GMFBP60983 142 aa12.87□□□□□ -0.35
NEDD1-213ENST00000557644 DNM1P46Q6ZS02 220 aa12.87□□□□□ -0.35
NEDD1-213ENST00000557644 BATF2Q8N1L9 274 aa12.87□□□□□ -0.35
NEDD1-213ENST00000557644 C19orf18Q8NEA5 215 aa12.87□□□□□ -0.35
NEDD1-213ENST00000557644 DNAAF1Q8NEP3 725 aa12.87□□□□□ -0.35
NEDD1-213ENST00000557644 Q8TCH9 128 aa12.87□□□□□ -0.35
NEDD1-213ENST00000557644 CHCHD6Q9BRQ6 235 aa12.87□□□□□ -0.35
NEDD1-213ENST00000557644 RNF167Q9H6Y7 350 aa12.87□□□□□ -0.35
NEDD1-213ENST00000557644 CHODLQ9H9P2 273 aa12.87□□□□□ -0.35
NEDD1-213ENST00000557644 TMEM138Q9NPI0 162 aa12.87□□□□□ -0.35
NEDD1-213ENST00000557644 IGHV4-30-2A0A087WSY4 118 aa12.86□□□□□ -0.35
NEDD1-213ENST00000557644 SHISA3A0PJX4 238 aa12.86□□□□□ -0.35
NEDD1-213ENST00000557644 ADRA2CP18825 462 aa12.86□□□□□ -0.35
NEDD1-213ENST00000557644 BDKRB2P30411 391 aa12.86□□□□□ -0.35
NEDD1-213ENST00000557644 ALDH3B2P48448 385 aa12.86□□□□□ -0.35
NEDD1-213ENST00000557644 RIN1Q13671 783 aa12.86□□□□□ -0.35
NEDD1-213ENST00000557644 KISS1Q15726 138 aa12.86□□□□□ -0.35
NEDD1-213ENST00000557644 CLEC2AQ6UVW9 174 aa12.86□□□□□ -0.35
NEDD1-213ENST00000557644 SATL1Q86VE3 508 aa12.86□□□□□ -0.35
NEDD1-213ENST00000557644 ZNF573Q86YE8 665 aa12.86□□□□□ -0.35
NEDD1-213ENST00000557644 BOLLQ8N9W6 283 aaKnown RBP12.86□□□□□ -0.35
NEDD1-213ENST00000557644 WFDC11Q8NEX6 87 aa12.86□□□□□ -0.35
NEDD1-213ENST00000557644 AQP3Q92482 292 aa12.86□□□□□ -0.35
NEDD1-213ENST00000557644 FAM168AQ92567 244 aa12.86□□□□□ -0.35
NEDD1-213ENST00000557644 THRSPQ92748 146 aa12.86□□□□□ -0.35
NEDD1-213ENST00000557644 ERGIC1Q969X5 290 aa12.86□□□□□ -0.35
NEDD1-213ENST00000557644 TCF7L1Q9HCS4 588 aa12.86□□□□□ -0.35
NEDD1-213ENST00000557644 TXNL4BQ9NX01 149 aaKnown RBP12.86□□□□□ -0.35
NEDD1-213ENST00000557644 FOXJ3Q9UPW0 622 aa12.86□□□□□ -0.35
NEDD1-213ENST00000557644 LOC100506127A0A0U1RQW1 187 aa12.86□□□□□ -0.35
NEDD1-213ENST00000557644 TMEM178BH3BS89 294 aa12.86□□□□□ -0.35
NEDD1-213ENST00000557644 AKR7A2O43488 359 aa12.86□□□□□ -0.35
NEDD1-213ENST00000557644 POU3F4P49335 361 aa12.86□□□□□ -0.35
NEDD1-213ENST00000557644 PDLIM4P50479 330 aa12.86□□□□□ -0.35
NEDD1-213ENST00000557644 ATP1B3P54709 279 aa12.86□□□□□ -0.35
NEDD1-213ENST00000557644 DDI2Q5TDH0 399 aa12.86□□□□□ -0.35
NEDD1-213ENST00000557644 LHFPL2Q6ZUX7 228 aa12.86□□□□□ -0.35
NEDD1-213ENST00000557644 LRRC29Q8WV35 223 aa12.86□□□□□ -0.35
NEDD1-213ENST00000557644 ZNF488Q96MN9 340 aa12.86□□□□□ -0.35
NEDD1-213ENST00000557644 PPIHO43447 177 aaKnown RBP12.85□□□□□ -0.35
NEDD1-213ENST00000557644 SPRY1O43609 319 aaPredicted RBP12.85□□□□□ -0.35
NEDD1-213ENST00000557644 EGR1P18146 543 aa12.85□□□□□ -0.35
NEDD1-213ENST00000557644 AVPI1Q5T686 147 aa12.85□□□□□ -0.35
NEDD1-213ENST00000557644 LRRTM1Q86UE6 522 aa12.85□□□□□ -0.35
NEDD1-213ENST00000557644 GCSAMQ8N6F7 178 aa12.85□□□□□ -0.35
NEDD1-213ENST00000557644 C10orf105Q8TEF2 133 aa12.85□□□□□ -0.35
NEDD1-213ENST00000557644 SEH1LQ96EE3 360 aa12.85□□□□□ -0.35
NEDD1-213ENST00000557644 CENPOQ9BU64 300 aa12.85□□□□□ -0.35
NEDD1-213ENST00000557644 FUNDC2Q9BWH2 189 aa12.85□□□□□ -0.35
NEDD1-213ENST00000557644 BPESC1Q9GZL8 116 aa12.85□□□□□ -0.35
NEDD1-213ENST00000557644 RNF7Q9UBF6 113 aa12.85□□□□□ -0.35
NEDD1-213ENST00000557644 SCOCQ9UIL1 159 aa12.85□□□□□ -0.35
NEDD1-213ENST00000557644 ITPR3Q14573 2671 aa12.85□□□□□ -0.35
NEDD1-213ENST00000557644 TANC2Q9HCD6 1990 aa12.85□□□□□ -0.35
NEDD1-213ENST00000557644 J3QT63 122 aa12.85□□□□□ -0.35
NEDD1-213ENST00000557644 WNT9BO14905 357 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms