RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 ZNF780AO75290 641 aaPredicted RBP3.27□□□□□ -1.89
PRPF39-212ENST00000557477 SRP72O76094 671 aaKnown RBP3.27□□□□□ -1.89
PRPF39-212ENST00000557477 H6PDO95479 791 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 AP2A1O95782 977 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 PTTG1O95997 202 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 CRYGCP07315 174 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 GUSBP08236 651 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 OR8G3PP0DMU2 310 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 IL7P13232 177 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 HMGA1P17096 107 aaKnown RBP3.27□□□□□ -1.89
PRPF39-212ENST00000557477 SPI1P17947 270 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 NPR2P20594 1047 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 PTNP21246 168 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 PAX6P26367 422 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 HSD11B1P28845 292 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 IL12AP29459 219 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 ERP29P30040 261 aaKnown RBP3.27□□□□□ -1.89
PRPF39-212ENST00000557477 LCN1P31025 176 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 FOXN2P32314 431 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 RORAP35398 523 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 TGFBR2P37173 567 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 FDFT1P37268 417 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 RPL13AP40429 203 aaKnown RBP3.27□□□□□ -1.89
PRPF39-212ENST00000557477 MAGEA6P43360 314 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 CSNK1EP49674 416 aaKnown RBP3.27□□□□□ -1.89
PRPF39-212ENST00000557477 CEBPDP49716 269 aaPredicted RBP3.27□□□□□ -1.89
PRPF39-212ENST00000557477 ATP1B3P54709 279 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 UCNP55089 124 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 ACTBP60709 375 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 NUTF2P61970 127 aaKnown RBP3.27□□□□□ -1.89
PRPF39-212ENST00000557477 ACTA2P62736 377 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 ACTG1P63261 375 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 ACTG2P63267 376 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 ACTC1P68032 377 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 ACTA1P68133 377 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 MYL5Q02045 173 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 TNFRSF17Q02223 184 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 BST2Q10589 180 aaKnown RBP3.27□□□□□ -1.89
PRPF39-212ENST00000557477 BTN1A1Q13410 526 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 ORC2Q13416 577 aaPredicted RBP3.27□□□□□ -1.89
PRPF39-212ENST00000557477 NSUN5P1Q3KNT7 163 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 NKAIN1Q4KMZ8 207 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 DMRTC1Q5HYR2 192 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 C1orf220Q5T0J3 134 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 FHL5Q5TD97 284 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 OR2G6Q5TZ20 316 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 SLC25A25Q6KCM7 469 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 ANKRD26P1Q6NSI1 321 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 WDR74Q6RFH5 385 aaPredicted RBP3.27□□□□□ -1.89
PRPF39-212ENST00000557477 UQCC3Q6UW78 93 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 CERS6Q6ZMG9 384 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 SCARA5Q6ZMJ2 495 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 FAM92BQ6ZTR7 304 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 PGAP1Q75T13 922 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 DHDDSQ86SQ9 333 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 TMEM150AQ86TG1 271 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 C11orf53Q8IXP5 236 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 ABCA7Q8IZY2 2146 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 TMEM86AQ8N2M4 240 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 TMEM252Q8N6L7 170 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 TMEM35BQ8NCS4 154 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 BHLHE23Q8NDY6 225 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 TMEM161BQ8NDZ6 487 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 STOML3Q8TAV4 291 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 ZFAND1Q8TCF1 268 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 BLOC1S5Q8TDH9 187 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 ST8SIA1Q92185 356 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 NT5C3BQ969T7 300 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 ISG20Q96AZ6 181 aaKnown RBP3.27□□□□□ -1.89
PRPF39-212ENST00000557477 TIMD4Q96H15 378 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 TPD52L3Q96J77 140 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 TECTBQ96PL2 329 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 SMIM14Q96QK8 99 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 RNF2Q99496 336 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 NICN1Q9BSH3 213 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 MFFQ9GZY8 342 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 NEUROG2Q9H2A3 272 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 EXO5Q9H790 373 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 ISG20L2Q9H9L3 353 aaKnown RBP3.27□□□□□ -1.89
PRPF39-212ENST00000557477 POLE4Q9NR33 117 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 KLHL28Q9NXS3 571 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 VAPAQ9P0L0 249 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 HSPE1-MOB4S4R3N1 261 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 SETXQ7Z333 2677 aaKnown RBP3.27□□□□□ -1.89
PRPF39-212ENST00000557477 TSC2P49815 1807 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 WDFY3Q8IZQ1 3526 aa3.27□□□□□ -1.89
PRPF39-212ENST00000557477 CITO14578 2027 aa3.26□□□□□ -1.89
PRPF39-212ENST00000557477 NUP205Q92621 2012 aa3.26□□□□□ -1.89
PRPF39-212ENST00000557477 ZZEF1O43149 2961 aa3.26□□□□□ -1.89
PRPF39-212ENST00000557477 EML5Q05BV3 1969 aa3.26□□□□□ -1.89
PRPF39-212ENST00000557477 TP53BP1Q12888 1972 aaPredicted RBP3.26□□□□□ -1.89
PRPF39-212ENST00000557477 ZNF638Q14966 1978 aaKnown RBP3.26□□□□□ -1.89
PRPF39-212ENST00000557477 A0A0A6YYH2 397 aa3.26□□□□□ -1.89
PRPF39-212ENST00000557477 A6NJ64 397 aa3.26□□□□□ -1.89
PRPF39-212ENST00000557477 PDZK1P1A8MUH7 402 aa3.26□□□□□ -1.89
PRPF39-212ENST00000557477 LRRN3E7EW58 273 aa3.26□□□□□ -1.89
PRPF39-212ENST00000557477 M0QYV0 167 aa3.26□□□□□ -1.89
PRPF39-212ENST00000557477 DCTN6O00399 190 aa3.26□□□□□ -1.89
PRPF39-212ENST00000557477 PIRO00625 290 aa3.26□□□□□ -1.89
PRPF39-212ENST00000557477 GYG2O15488 501 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms