RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 BTNL3Q6UXE8 466 aa10.42□□□□□ -0.74
SLIRP-209ENST00000557342 TMPRSS11AQ6ZMR5 421 aa10.42□□□□□ -0.74
SLIRP-209ENST00000557342 SLC36A1Q7Z2H8 476 aa10.42□□□□□ -0.74
SLIRP-209ENST00000557342 PRIMA1Q86XR5 153 aa10.42□□□□□ -0.74
SLIRP-209ENST00000557342 FAM90A1Q86YD7 464 aa10.42□□□□□ -0.74
SLIRP-209ENST00000557342 PP6455Q8WZ26 134 aa10.42□□□□□ -0.74
SLIRP-209ENST00000557342 RNF166Q96A37 237 aaPredicted RBP10.42□□□□□ -0.74
SLIRP-209ENST00000557342 ZNF649Q9BS31 505 aa10.42□□□□□ -0.74
SLIRP-209ENST00000557342 MRI1Q9BV20 369 aa10.42□□□□□ -0.74
SLIRP-209ENST00000557342 TMPRSS13Q9BYE2 586 aa10.42□□□□□ -0.74
SLIRP-209ENST00000557342 CHCHD3Q9NX63 227 aaKnown RBP10.42□□□□□ -0.74
SLIRP-209ENST00000557342 KAAG1Q9UBP8 84 aa10.42□□□□□ -0.74
SLIRP-209ENST00000557342 DNAJB11Q9UBS4 358 aa10.42□□□□□ -0.74
SLIRP-209ENST00000557342 HHLA2Q9UM44 414 aa10.42□□□□□ -0.74
SLIRP-209ENST00000557342 EXOSC1Q9Y3B2 195 aaKnown RBP10.42□□□□□ -0.74
SLIRP-209ENST00000557342 INSIG2Q9Y5U4 225 aa10.42□□□□□ -0.74
SLIRP-209ENST00000557342 IGHV3OR15-7A0A075B7D8 119 aa10.41□□□□□ -0.74
SLIRP-209ENST00000557342 A6NIN4 97 aa10.41□□□□□ -0.74
SLIRP-209ENST00000557342 TRAPPC2LH3BP13 241 aa10.41□□□□□ -0.74
SLIRP-209ENST00000557342 H3BSH0 61 aa10.41□□□□□ -0.74
SLIRP-209ENST00000557342 TNFRSF13BO14836 293 aaPredicted RBP10.41□□□□□ -0.74
SLIRP-209ENST00000557342 LIMS3P0CW19 117 aa10.41□□□□□ -0.74
SLIRP-209ENST00000557342 LIMS4P0CW20 117 aa10.41□□□□□ -0.74
SLIRP-209ENST00000557342 GLRA1P23415 457 aa10.41□□□□□ -0.74
SLIRP-209ENST00000557342 TGM4P49221 684 aa10.41□□□□□ -0.74
SLIRP-209ENST00000557342 NANOS3P60323 173 aaKnown RBP10.41□□□□□ -0.74
SLIRP-209ENST00000557342 HOXA4Q00056 320 aaPredicted RBP10.41□□□□□ -0.74
SLIRP-209ENST00000557342 CNN3Q15417 329 aaKnown RBP10.41□□□□□ -0.74
SLIRP-209ENST00000557342 C11orf91Q3C1V1 193 aa10.41□□□□□ -0.74
SLIRP-209ENST00000557342 WDR25Q64LD2 544 aaPredicted RBP10.41□□□□□ -0.74
SLIRP-209ENST00000557342 HAGHLQ6PII5 290 aaPredicted RBP10.41□□□□□ -0.74
SLIRP-209ENST00000557342 ZNF841Q6ZN19 808 aa10.41□□□□□ -0.74
SLIRP-209ENST00000557342 RDH10Q8IZV5 341 aa10.41□□□□□ -0.74
SLIRP-209ENST00000557342 ZNF676Q8N7Q3 588 aa10.41□□□□□ -0.74
SLIRP-209ENST00000557342 RAB40AQ8WXH6 277 aa10.41□□□□□ -0.74
SLIRP-209ENST00000557342 AQP3Q92482 292 aa10.41□□□□□ -0.74
SLIRP-209ENST00000557342 TFAP2CQ92754 450 aa10.41□□□□□ -0.74
SLIRP-209ENST00000557342 TMEM80Q96HE8 168 aa10.41□□□□□ -0.74
SLIRP-209ENST00000557342 CHST5Q9GZS9 411 aa10.41□□□□□ -0.74
SLIRP-209ENST00000557342 COMMD4Q9H0A8 199 aa10.41□□□□□ -0.74
SLIRP-209ENST00000557342 DNTTIP1Q9H147 329 aa10.41□□□□□ -0.74
SLIRP-209ENST00000557342 ISG20L2Q9H9L3 353 aaKnown RBP10.41□□□□□ -0.74
SLIRP-209ENST00000557342 MMP26Q9NRE1 261 aa10.41□□□□□ -0.74
SLIRP-209ENST00000557342 RASL12Q9NYN1 266 aa10.41□□□□□ -0.74
SLIRP-209ENST00000557342 METRNQ9UJH8 293 aa10.41□□□□□ -0.74
SLIRP-209ENST00000557342 DIMT1Q9UNQ2 313 aaKnown RBP10.41□□□□□ -0.74
SLIRP-209ENST00000557342 POLDIP2Q9Y2S7 368 aa10.41□□□□□ -0.74
SLIRP-209ENST00000557342 CAB39Q9Y376 341 aaPredicted RBP10.41□□□□□ -0.74
SLIRP-209ENST00000557342 LOC105371242A0A075B767 164 aa10.4□□□□□ -0.74
SLIRP-209ENST00000557342 IGHV2-70DA0A0C4DH43 119 aa10.4□□□□□ -0.74
SLIRP-209ENST00000557342 PQLC2LA1A4F0 135 aa10.4□□□□□ -0.74
SLIRP-209ENST00000557342 EFCAB10A6NFE3 127 aa10.4□□□□□ -0.74
SLIRP-209ENST00000557342 NKX6-3A6NJ46 265 aa10.4□□□□□ -0.74
SLIRP-209ENST00000557342 TMEM212A6NML5 194 aa10.4□□□□□ -0.74
SLIRP-209ENST00000557342 OR4C45A6NMZ5 311 aa10.4□□□□□ -0.74
SLIRP-209ENST00000557342 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.4□□□□□ -0.74
SLIRP-209ENST00000557342 J3QT63 122 aa10.4□□□□□ -0.74
SLIRP-209ENST00000557342 TMPRSS2O15393 492 aa10.4□□□□□ -0.74
SLIRP-209ENST00000557342 AKR7A2O43488 359 aa10.4□□□□□ -0.74
SLIRP-209ENST00000557342 RHBDL1O75783 438 aa10.4□□□□□ -0.74
SLIRP-209ENST00000557342 GNAO1P09471 354 aa10.4□□□□□ -0.74
SLIRP-209ENST00000557342 PIPP12273 146 aaPredicted RBP10.4□□□□□ -0.74
SLIRP-209ENST00000557342 ZNF20P17024 532 aa10.4□□□□□ -0.74
SLIRP-209ENST00000557342 HAAOP46952 286 aa10.4□□□□□ -0.74
SLIRP-209ENST00000557342 FUT6P51993 359 aa10.4□□□□□ -0.74
SLIRP-209ENST00000557342 CCDC58Q4VC31 144 aa10.4□□□□□ -0.74
SLIRP-209ENST00000557342 DMRTC1Q5HYR2 192 aa10.4□□□□□ -0.74
SLIRP-209ENST00000557342 ATPAF1Q5TC12 328 aaPredicted RBP10.4□□□□□ -0.74
SLIRP-209ENST00000557342 UTS2BQ765I0 119 aa10.4□□□□□ -0.74
SLIRP-209ENST00000557342 C1QL2Q7Z5L3 287 aa10.4□□□□□ -0.74
SLIRP-209ENST00000557342 OR13C3Q8NGS6 347 aa10.4□□□□□ -0.74
SLIRP-209ENST00000557342 OR5AK2Q8NH90 309 aa10.4□□□□□ -0.74
SLIRP-209ENST00000557342 NANPQ8TBE9 248 aa10.4□□□□□ -0.74
SLIRP-209ENST00000557342 FBLIM1Q8WUP2 373 aa10.4□□□□□ -0.74
SLIRP-209ENST00000557342 TMIGD2Q96BF3 282 aa10.4□□□□□ -0.74
SLIRP-209ENST00000557342 PKIBQ9C010 78 aa10.4□□□□□ -0.74
SLIRP-209ENST00000557342 PLCXD1Q9NUJ7 323 aa10.4□□□□□ -0.74
SLIRP-209ENST00000557342 CNOT2Q9NZN8 540 aaKnown RBP10.4□□□□□ -0.74
SLIRP-209ENST00000557342 CTSZQ9UBR2 303 aa10.4□□□□□ -0.74
SLIRP-209ENST00000557342 AUP1Q9Y679 476 aa10.4□□□□□ -0.74
SLIRP-209ENST00000557342 NIPBLQ6KC79 2804 aaeCLIP10.39□□□□□ -0.75
SLIRP-209ENST00000557342 TRBV2A0A0J9YWF9 115 aa10.39□□□□□ -0.75
SLIRP-209ENST00000557342 FAM230AA0A1W2PPH8 454 aa10.39□□□□□ -0.75
SLIRP-209ENST00000557342 GPR37O15354 613 aa10.39□□□□□ -0.75
SLIRP-209ENST00000557342 NDUFB3O43676 98 aa10.39□□□□□ -0.75
SLIRP-209ENST00000557342 ENSAO43768 121 aaKnown RBP10.39□□□□□ -0.75
SLIRP-209ENST00000557342 NOS1APO75052 506 aaPredicted RBP10.39□□□□□ -0.75
SLIRP-209ENST00000557342 ECDO95905 644 aaPredicted RBP10.39□□□□□ -0.75
SLIRP-209ENST00000557342 AVPP01185 164 aa10.39□□□□□ -0.75
SLIRP-209ENST00000557342 LIPFP07098 398 aa10.39□□□□□ -0.75
SLIRP-209ENST00000557342 HSPA13P48723 471 aa10.39□□□□□ -0.75
SLIRP-209ENST00000557342 ETV1P50549 477 aa10.39□□□□□ -0.75
SLIRP-209ENST00000557342 GMFBP60983 142 aa10.39□□□□□ -0.75
SLIRP-209ENST00000557342 PAX2Q02962 417 aa10.39□□□□□ -0.75
SLIRP-209ENST00000557342 PAX8Q06710 450 aa10.39□□□□□ -0.75
SLIRP-209ENST00000557342 UBE2V2Q15819 145 aa10.39□□□□□ -0.75
SLIRP-209ENST00000557342 STUMQ69YW2 141 aa10.39□□□□□ -0.75
SLIRP-209ENST00000557342 RPL22L1Q6P5R6 122 aaKnown RBP10.39□□□□□ -0.75
SLIRP-209ENST00000557342 IZUMO2Q6UXV1 221 aa10.39□□□□□ -0.75
SLIRP-209ENST00000557342 C1orf229Q6ZS94 237 aaPredicted RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms