RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 CNOT2Q9NZN8 540 aaKnown RBP8.92□□□□□ -0.98
LINC00239-201ENST00000556973 ERVK-18Q9QC07 812 aa8.92□□□□□ -0.98
LINC00239-201ENST00000556973 CLN8Q9UBY8 286 aa8.92□□□□□ -0.98
LINC00239-201ENST00000556973 HHLA2Q9UM44 414 aa8.92□□□□□ -0.98
LINC00239-201ENST00000556973 SLC7A11Q9UPY5 501 aa8.92□□□□□ -0.98
LINC00239-201ENST00000556973 HIVEP2P31629 2446 aa8.92□□□□□ -0.98
LINC00239-201ENST00000556973 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.91□□□□□ -0.98
LINC00239-201ENST00000556973 TRBV2A0A0J9YWF9 115 aa8.91□□□□□ -0.98
LINC00239-201ENST00000556973 LOC107986453A0A1B0GWG9 222 aa8.91□□□□□ -0.98
LINC00239-201ENST00000556973 PQLC2LA1A4F0 135 aa8.91□□□□□ -0.98
LINC00239-201ENST00000556973 ANKRD61A6NGH8 418 aa8.91□□□□□ -0.98
LINC00239-201ENST00000556973 TMEM212A6NML5 194 aa8.91□□□□□ -0.98
LINC00239-201ENST00000556973 KIAA1324LA8MWY0 1029 aaPredicted RBP8.91□□□□□ -0.98
LINC00239-201ENST00000556973 E9PI62 339 aa8.91□□□□□ -0.98
LINC00239-201ENST00000556973 H3BSH0 61 aa8.91□□□□□ -0.98
LINC00239-201ENST00000556973 PHF1O43189 567 aaPredicted RBP8.91□□□□□ -0.98
LINC00239-201ENST00000556973 ADAM20O43506 726 aa8.91□□□□□ -0.98
LINC00239-201ENST00000556973 CCDC159P0C7I6 412 aa8.91□□□□□ -0.98
LINC00239-201ENST00000556973 SRP14P37108 136 aaKnown RBP8.91□□□□□ -0.98
LINC00239-201ENST00000556973 HAAOP46952 286 aa8.91□□□□□ -0.98
LINC00239-201ENST00000556973 PITPNBP48739 271 aa8.91□□□□□ -0.98
LINC00239-201ENST00000556973 FUT6P51993 359 aa8.91□□□□□ -0.98
LINC00239-201ENST00000556973 AQP4P55087 323 aa8.91□□□□□ -0.98
LINC00239-201ENST00000556973 ST3GAL4Q11206 333 aa8.91□□□□□ -0.98
LINC00239-201ENST00000556973 UBE2V2Q15819 145 aa8.91□□□□□ -0.98
LINC00239-201ENST00000556973 C11orf91Q3C1V1 193 aa8.91□□□□□ -0.98
LINC00239-201ENST00000556973 CCDC58Q4VC31 144 aa8.91□□□□□ -0.98
LINC00239-201ENST00000556973 DMRTC1Q5HYR2 192 aa8.91□□□□□ -0.98
LINC00239-201ENST00000556973 ATPAF1Q5TC12 328 aaPredicted RBP8.91□□□□□ -0.98
LINC00239-201ENST00000556973 CD276Q5ZPR3 534 aa8.91□□□□□ -0.98
LINC00239-201ENST00000556973 WDR25Q64LD2 544 aaPredicted RBP8.91□□□□□ -0.98
LINC00239-201ENST00000556973 LAIR2Q6ISS4 152 aa8.91□□□□□ -0.98
LINC00239-201ENST00000556973 RPL22L1Q6P5R6 122 aaKnown RBP8.91□□□□□ -0.98
LINC00239-201ENST00000556973 HAGHLQ6PII5 290 aaPredicted RBP8.91□□□□□ -0.98
LINC00239-201ENST00000556973 OR5AK2Q8NH90 309 aa8.91□□□□□ -0.98
LINC00239-201ENST00000556973 RAB40AQ8WXH6 277 aa8.91□□□□□ -0.98
LINC00239-201ENST00000556973 FGGYQ96C11 551 aa8.91□□□□□ -0.98
LINC00239-201ENST00000556973 TMPRSS13Q9BYE2 586 aa8.91□□□□□ -0.98
LINC00239-201ENST00000556973 COMMD4Q9H0A8 199 aa8.91□□□□□ -0.98
LINC00239-201ENST00000556973 DNTTIP1Q9H147 329 aa8.91□□□□□ -0.98
LINC00239-201ENST00000556973 BABAM2Q9NXR7 383 aa8.91□□□□□ -0.98
LINC00239-201ENST00000556973 KAAG1Q9UBP8 84 aa8.91□□□□□ -0.98
LINC00239-201ENST00000556973 OR5V1Q9UGF6 321 aa8.91□□□□□ -0.98
LINC00239-201ENST00000556973 PSORS1C1Q9UIG5 152 aa8.91□□□□□ -0.98
LINC00239-201ENST00000556973 INSIG2Q9Y5U4 225 aa8.91□□□□□ -0.98
LINC00239-201ENST00000556973 DOCK11Q5JSL3 2073 aa8.9□□□□□ -0.98
LINC00239-201ENST00000556973 ZFHX3Q15911 3703 aa8.9□□□□□ -0.98
LINC00239-201ENST00000556973 CSPG4Q6UVK1 2322 aa8.9□□□□□ -0.98
LINC00239-201ENST00000556973 IGHV3OR15-7A0A075B7D8 119 aa8.9□□□□□ -0.98
LINC00239-201ENST00000556973 KIR2DS1A0A191URI9 304 aa8.9□□□□□ -0.98
LINC00239-201ENST00000556973 FAM230AA0A1W2PPH8 454 aa8.9□□□□□ -0.98
LINC00239-201ENST00000556973 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.9□□□□□ -0.98
LINC00239-201ENST00000556973 TMPRSS2O15393 492 aa8.9□□□□□ -0.98
LINC00239-201ENST00000556973 AKR7A2O43488 359 aa8.9□□□□□ -0.98
LINC00239-201ENST00000556973 NOS1APO75052 506 aaPredicted RBP8.9□□□□□ -0.98
LINC00239-201ENST00000556973 RHBDL1O75783 438 aa8.9□□□□□ -0.98
LINC00239-201ENST00000556973 ZFPL1O95159 310 aa8.9□□□□□ -0.98
LINC00239-201ENST00000556973 ATP6V1G2O95670 118 aa8.9□□□□□ -0.98
LINC00239-201ENST00000556973 ACAA1P09110 424 aaPredicted RBP8.9□□□□□ -0.98
LINC00239-201ENST00000556973 ZNF20P17024 532 aa8.9□□□□□ -0.98
LINC00239-201ENST00000556973 GLRA1P23415 457 aa8.9□□□□□ -0.98
LINC00239-201ENST00000556973 GTF2A1P52655 376 aaPredicted RBP8.9□□□□□ -0.98
LINC00239-201ENST00000556973 PAX2Q02962 417 aa8.9□□□□□ -0.98
LINC00239-201ENST00000556973 CNN3Q15417 329 aaKnown RBP8.9□□□□□ -0.98
LINC00239-201ENST00000556973 OR2G6Q5TZ20 316 aa8.9□□□□□ -0.98
LINC00239-201ENST00000556973 BTNL3Q6UXE8 466 aa8.9□□□□□ -0.98
LINC00239-201ENST00000556973 UTS2BQ765I0 119 aa8.9□□□□□ -0.98
LINC00239-201ENST00000556973 SLC36A1Q7Z2H8 476 aa8.9□□□□□ -0.98
LINC00239-201ENST00000556973 PRIMA1Q86XR5 153 aa8.9□□□□□ -0.98
LINC00239-201ENST00000556973 SERPINA12Q8IW75 414 aa8.9□□□□□ -0.98
LINC00239-201ENST00000556973 STX19Q8N4C7 294 aa8.9□□□□□ -0.98
LINC00239-201ENST00000556973 DNAAF1Q8NEP3 725 aa8.9□□□□□ -0.98
LINC00239-201ENST00000556973 BPIFB6Q8NFQ5 453 aa8.9□□□□□ -0.98
LINC00239-201ENST00000556973 OR13C3Q8NGS6 347 aa8.9□□□□□ -0.98
LINC00239-201ENST00000556973 NANPQ8TBE9 248 aa8.9□□□□□ -0.98
LINC00239-201ENST00000556973 TRMT10AQ8TBZ6 339 aaKnown RBP8.9□□□□□ -0.98
LINC00239-201ENST00000556973 TMIGD2Q96BF3 282 aa8.9□□□□□ -0.98
LINC00239-201ENST00000556973 ADAT3Q96EY9 351 aaPredicted RBP8.9□□□□□ -0.98
LINC00239-201ENST00000556973 MED30Q96HR3 178 aa8.9□□□□□ -0.98
LINC00239-201ENST00000556973 MRI1Q9BV20 369 aa8.9□□□□□ -0.98
LINC00239-201ENST00000556973 CHST5Q9GZS9 411 aa8.9□□□□□ -0.98
LINC00239-201ENST00000556973 RASSF4Q9H2L5 321 aa8.9□□□□□ -0.98
LINC00239-201ENST00000556973 MMP26Q9NRE1 261 aa8.9□□□□□ -0.98
LINC00239-201ENST00000556973 DNAJB11Q9UBS4 358 aa8.9□□□□□ -0.98
LINC00239-201ENST00000556973 METRNQ9UJH8 293 aa8.9□□□□□ -0.98
LINC00239-201ENST00000556973 POLDIP2Q9Y2S7 368 aa8.9□□□□□ -0.98
LINC00239-201ENST00000556973 SVEP1Q4LDE5 3571 aa8.9□□□□□ -0.98
LINC00239-201ENST00000556973 NSD1Q96L73 2696 aaPredicted RBP8.89□□□□□ -0.99
LINC00239-201ENST00000556973 FN1P02751 2386 aaKnown RBP8.89□□□□□ -0.99
LINC00239-201ENST00000556973 LOC105371242A0A075B767 164 aa8.89□□□□□ -0.99
LINC00239-201ENST00000556973 OR2AT4A6NND4 320 aa8.89□□□□□ -0.99
LINC00239-201ENST00000556973 J3QT63 122 aa8.89□□□□□ -0.99
LINC00239-201ENST00000556973 DVL1O14640 695 aa8.89□□□□□ -0.99
LINC00239-201ENST00000556973 GPR37O15354 613 aa8.89□□□□□ -0.99
LINC00239-201ENST00000556973 OGG1O15527 345 aa8.89□□□□□ -0.99
LINC00239-201ENST00000556973 XPNPEP2O43895 674 aa8.89□□□□□ -0.99
LINC00239-201ENST00000556973 ECDO95905 644 aaPredicted RBP8.89□□□□□ -0.99
LINC00239-201ENST00000556973 AVPP01185 164 aa8.89□□□□□ -0.99
LINC00239-201ENST00000556973 LIPFP07098 398 aa8.89□□□□□ -0.99
LINC00239-201ENST00000556973 ATF1P18846 271 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms