RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 NFKBIDQ8NI38 313 aa4.43□□□□□ -1.7
ATXN3-245ENST00000556958 RNF183Q96D59 192 aa4.43□□□□□ -1.7
ATXN3-245ENST00000556958 LRGUKQ96M69 825 aa4.43□□□□□ -1.7
ATXN3-245ENST00000556958 OR52E6Q96RD3 313 aa4.43□□□□□ -1.7
ATXN3-245ENST00000556958 MCHR1Q99705 422 aa4.43□□□□□ -1.7
ATXN3-245ENST00000556958 WFDC6Q9BQY6 131 aa4.43□□□□□ -1.7
ATXN3-245ENST00000556958 RAD21L1Q9H4I0 556 aa4.43□□□□□ -1.7
ATXN3-245ENST00000556958 CCDC134Q9H6E4 229 aa4.43□□□□□ -1.7
ATXN3-245ENST00000556958 WDR55Q9H6Y2 383 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-245ENST00000556958 SIGLEC8Q9NYZ4 499 aa4.43□□□□□ -1.7
ATXN3-245ENST00000556958 ACTR3BQ9P1U1 418 aa4.43□□□□□ -1.7
ATXN3-245ENST00000556958 KIAA1456Q9P272 454 aa4.43□□□□□ -1.7
ATXN3-245ENST00000556958 NLKQ9UBE8 527 aa4.43□□□□□ -1.7
ATXN3-245ENST00000556958 LINC00527Q9UJ94 153 aa4.43□□□□□ -1.7
ATXN3-245ENST00000556958 SORL1Q92673 2214 aa4.43□□□□□ -1.7
ATXN3-245ENST00000556958 SRRM2Q9UQ35 2752 aaKnown RBP4.43□□□□□ -1.7
ATXN3-245ENST00000556958 DYNC1H1Q14204 4646 aaKnown RBP4.42□□□□□ -1.7
ATXN3-245ENST00000556958 TRAPPC13A5PLN9 417 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 MAGEA13PA6NCF6 341 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 TMEM233B4DJY2 109 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 H0Y980 276 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 SLC1A7O00341 560 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 DYNC1I1O14576 645 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 SLC22A2O15244 555 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 PLIN3O60664 434 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 TPST2O60704 377 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 OR7A10O76100 309 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 NDUFB8O95169 186 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 IGHG2P01859 326 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 MT-ND1P03886 318 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 SPARCP09486 303 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 ACSM4P0C7M7 580 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 RBMY1A1P0DJD3 496 aaKnown RBP4.42□□□□□ -1.7
ATXN3-245ENST00000556958 ZNF728P0DKX0 622 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 CCL3L1P16619 93 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 CEACAM3P40198 252 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 MDH1P40925 334 aaKnown RBP4.42□□□□□ -1.7
ATXN3-245ENST00000556958 MNDAP41218 407 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 ISL1P61371 349 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 ACTA2P62736 377 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 ACTG2P63267 376 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 CSNK2BP67870 215 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 ACTC1P68032 377 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 ACTA1P68133 377 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 CBX1P83916 185 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 MXRA7P84157 204 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 RUNX1Q01196 453 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 IFFO1Q0D2I5 559 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 ALG10Q5BKT4 473 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 CT83Q5H943 113 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 GPR139Q6DWJ6 353 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 CCDC144NLQ6NUI1 221 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 PGM2L1Q6PCE3 622 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 SLC2A7Q6PXP3 512 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 TRMT10CQ7L0Y3 403 aaKnown RBP4.42□□□□□ -1.7
ATXN3-245ENST00000556958 ANKRD13BQ86YJ7 626 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 DPP10Q8N608 796 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 OR4M1Q8NGD0 313 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 MOSPD2Q8NHP6 518 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 LIPHQ8WWY8 451 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 CREB3L1Q96BA8 519 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 SGTBQ96EQ0 304 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 SDSLQ96GA7 329 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 ZIM3Q96PE6 472 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 MICU1Q9BPX6 476 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 ELOVL1Q9BW60 279 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 WDR13Q9H1Z4 485 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 OPA3Q9H6K4 179 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 TPT1P8Q9HAU6 139 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 SCRT2Q9NQ03 307 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 TBC1D23Q9NUY8 699 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 NDE1Q9NXR1 346 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 ADA2Q9NZK5 511 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 RPS6KA6Q9UK32 745 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 SLC7A7Q9UM01 511 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 HHLA2Q9UM44 414 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 STUB1Q9UNE7 303 aa4.42□□□□□ -1.7
ATXN3-245ENST00000556958 IGKV1D-17A0A075B6S4 117 aa4.41□□□□□ -1.7
ATXN3-245ENST00000556958 TEX13CA0A0J9YWL9 993 aa4.41□□□□□ -1.7
ATXN3-245ENST00000556958 HTR3EA5X5Y0 456 aa4.41□□□□□ -1.7
ATXN3-245ENST00000556958 CPSF4LA6NMK7 179 aaKnown RBP4.41□□□□□ -1.7
ATXN3-245ENST00000556958 LEUTXA8MZ59 168 aa4.41□□□□□ -1.7
ATXN3-245ENST00000556958 I3L521 148 aa4.41□□□□□ -1.7
ATXN3-245ENST00000556958 XKRYO14609 159 aa4.41□□□□□ -1.7
ATXN3-245ENST00000556958 FGF16O43320 207 aa4.41□□□□□ -1.7
ATXN3-245ENST00000556958 AKR7A2O43488 359 aa4.41□□□□□ -1.7
ATXN3-245ENST00000556958 TPST1O60507 370 aa4.41□□□□□ -1.7
ATXN3-245ENST00000556958 KHDRBS3O75525 346 aaKnown RBP4.41□□□□□ -1.7
ATXN3-245ENST00000556958 SERPINA1P01009 418 aa4.41□□□□□ -1.7
ATXN3-245ENST00000556958 ALDOCP09972 364 aaKnown RBP4.41□□□□□ -1.7
ATXN3-245ENST00000556958 TSPAN19P0C672 248 aa4.41□□□□□ -1.7
ATXN3-245ENST00000556958 ZCCHC18P0CG32 403 aa4.41□□□□□ -1.7
ATXN3-245ENST00000556958 PSG2P11465 335 aa4.41□□□□□ -1.7
ATXN3-245ENST00000556958 GLRA1P23415 457 aa4.41□□□□□ -1.7
ATXN3-245ENST00000556958 CDKN2CP42773 168 aa4.41□□□□□ -1.7
ATXN3-245ENST00000556958 TCTAP57738 103 aa4.41□□□□□ -1.7
ATXN3-245ENST00000556958 HIST1H3AP68431 136 aa4.41□□□□□ -1.7
ATXN3-245ENST00000556958 PITPNAQ00169 270 aa4.41□□□□□ -1.7
ATXN3-245ENST00000556958 ZNF92Q03936 586 aa4.41□□□□□ -1.7
ATXN3-245ENST00000556958 SNCBQ16143 134 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms