RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 CRIP3Q6Q6R5 217 aa14.71□□□□□ -0.05
TUBB3-211ENST00000556536 LRRTM1Q86UE6 522 aa14.71□□□□□ -0.05
TUBB3-211ENST00000556536 C11orf53Q8IXP5 236 aa14.71□□□□□ -0.05
TUBB3-211ENST00000556536 DNAAF1Q8NEP3 725 aa14.71□□□□□ -0.05
TUBB3-211ENST00000556536 OR52N4Q8NGI2 321 aa14.71□□□□□ -0.05
TUBB3-211ENST00000556536 NINJ1Q92982 152 aa14.71□□□□□ -0.05
TUBB3-211ENST00000556536 YIPF5Q969M3 257 aa14.71□□□□□ -0.05
TUBB3-211ENST00000556536 SPSB1Q96BD6 273 aa14.71□□□□□ -0.05
TUBB3-211ENST00000556536 NKX3-1Q99801 234 aaPredicted RBP14.71□□□□□ -0.05
TUBB3-211ENST00000556536 CENPOQ9BU64 300 aa14.71□□□□□ -0.05
TUBB3-211ENST00000556536 GSX2Q9BZM3 304 aa14.71□□□□□ -0.05
TUBB3-211ENST00000556536 NAA50Q9GZZ1 169 aaKnown RBP14.71□□□□□ -0.05
TUBB3-211ENST00000556536 GCM1Q9NP62 436 aa14.71□□□□□ -0.05
TUBB3-211ENST00000556536 BEX4Q9NWD9 120 aaPredicted RBP14.71□□□□□ -0.05
TUBB3-211ENST00000556536 ARFGEF3Q5TH69 2177 aa14.71□□□□□ -0.05
TUBB3-211ENST00000556536 DSCAMO60469 2012 aa14.7□□□□□ -0.06
TUBB3-211ENST00000556536 SHISA3A0PJX4 238 aa14.7□□□□□ -0.06
TUBB3-211ENST00000556536 TMEM210A6NLX4 147 aa14.7□□□□□ -0.06
TUBB3-211ENST00000556536 ARL6IP5O75915 188 aa14.7□□□□□ -0.06
TUBB3-211ENST00000556536 HCKP08631 526 aa14.7□□□□□ -0.06
TUBB3-211ENST00000556536 OCMP0CE72 109 aaPredicted RBP14.7□□□□□ -0.06
TUBB3-211ENST00000556536 DAOP14920 347 aa14.7□□□□□ -0.06
TUBB3-211ENST00000556536 ADRA2CP18825 462 aa14.7□□□□□ -0.06
TUBB3-211ENST00000556536 TNFRSF1AP19438 455 aa14.7□□□□□ -0.06
TUBB3-211ENST00000556536 SRMP19623 302 aa14.7□□□□□ -0.06
TUBB3-211ENST00000556536 BDKRB2P30411 391 aa14.7□□□□□ -0.06
TUBB3-211ENST00000556536 GATA4P43694 442 aa14.7□□□□□ -0.06
TUBB3-211ENST00000556536 ATP5J2P56134 94 aa14.7□□□□□ -0.06
TUBB3-211ENST00000556536 MTCP1P56278 107 aa14.7□□□□□ -0.06
TUBB3-211ENST00000556536 GPR107Q5VW38 600 aa14.7□□□□□ -0.06
TUBB3-211ENST00000556536 ZNF826PQ6ZT77 177 aa14.7□□□□□ -0.06
TUBB3-211ENST00000556536 SATL1Q86VE3 508 aa14.7□□□□□ -0.06
TUBB3-211ENST00000556536 ANGPTL5Q86XS5 388 aa14.7□□□□□ -0.06
TUBB3-211ENST00000556536 ZNF420Q8TAQ5 688 aaPredicted RBP14.7□□□□□ -0.06
TUBB3-211ENST00000556536 RFT1Q96AA3 541 aa14.7□□□□□ -0.06
TUBB3-211ENST00000556536 MBD6Q96DN6 1003 aa14.7□□□□□ -0.06
TUBB3-211ENST00000556536 BORCS8Q96FH0 119 aa14.7□□□□□ -0.06
TUBB3-211ENST00000556536 TLNRD1Q9H1K6 362 aa14.7□□□□□ -0.06
TUBB3-211ENST00000556536 TCF7L1Q9HCS4 588 aa14.7□□□□□ -0.06
TUBB3-211ENST00000556536 TMEM138Q9NPI0 162 aa14.7□□□□□ -0.06
TUBB3-211ENST00000556536 C1orf123Q9NWV4 160 aa14.7□□□□□ -0.06
TUBB3-211ENST00000556536 DCAF16Q9NXF7 216 aa14.7□□□□□ -0.06
TUBB3-211ENST00000556536 IGHV1-69-2A0A0G2JMI3 117 aa14.69□□□□□ -0.06
TUBB3-211ENST00000556536 LRP5LA4QPB2 252 aa14.69□□□□□ -0.06
TUBB3-211ENST00000556536 CDIPTO14735 213 aa14.69□□□□□ -0.06
TUBB3-211ENST00000556536 AIREO43918 545 aa14.69□□□□□ -0.06
TUBB3-211ENST00000556536 ALDOBP05062 364 aa14.69□□□□□ -0.06
TUBB3-211ENST00000556536 TGFBR1P36897 503 aa14.69□□□□□ -0.06
TUBB3-211ENST00000556536 HAAOP46952 286 aa14.69□□□□□ -0.06
TUBB3-211ENST00000556536 RBP2P50120 134 aa14.69□□□□□ -0.06
TUBB3-211ENST00000556536 ATP1B3P54709 279 aa14.69□□□□□ -0.06
TUBB3-211ENST00000556536 LSM3P62310 102 aaKnown RBP14.69□□□□□ -0.06
TUBB3-211ENST00000556536 HOXA4Q00056 320 aaPredicted RBP14.69□□□□□ -0.06
TUBB3-211ENST00000556536 HAGHLQ6PII5 290 aaPredicted RBP14.69□□□□□ -0.06
TUBB3-211ENST00000556536 SLC16A12Q6ZSM3 486 aa14.69□□□□□ -0.06
TUBB3-211ENST00000556536 LHFPL2Q6ZUX7 228 aa14.69□□□□□ -0.06
TUBB3-211ENST00000556536 CALHM1Q8IU99 346 aa14.69□□□□□ -0.06
TUBB3-211ENST00000556536 SCCPDHQ8NBX0 429 aa14.69□□□□□ -0.06
TUBB3-211ENST00000556536 SNTG1Q9NSN8 517 aa14.69□□□□□ -0.06
TUBB3-211ENST00000556536 PPP1R3CQ9UQK1 317 aa14.69□□□□□ -0.06
TUBB3-211ENST00000556536 USF3Q68DE3 2245 aa14.68□□□□□ -0.06
TUBB3-211ENST00000556536 A6NLC8 198 aa14.68□□□□□ -0.06
TUBB3-211ENST00000556536 C3orf80F5H4A9 247 aa14.68□□□□□ -0.06
TUBB3-211ENST00000556536 SSX4O60224 188 aa14.68□□□□□ -0.06
TUBB3-211ENST00000556536 RP2O75695 350 aa14.68□□□□□ -0.06
TUBB3-211ENST00000556536 RHBDL1O75783 438 aa14.68□□□□□ -0.06
TUBB3-211ENST00000556536 PLATP00750 562 aa14.68□□□□□ -0.06
TUBB3-211ENST00000556536 KISS1Q15726 138 aa14.68□□□□□ -0.06
TUBB3-211ENST00000556536 TIMM50Q3ZCQ8 353 aa14.68□□□□□ -0.06
TUBB3-211ENST00000556536 DDI2Q5TDH0 399 aa14.68□□□□□ -0.06
TUBB3-211ENST00000556536 ZNF573Q86YE8 665 aa14.68□□□□□ -0.06
TUBB3-211ENST00000556536 ANKRD13BQ86YJ7 626 aa14.68□□□□□ -0.06
TUBB3-211ENST00000556536 AQP3Q92482 292 aa14.68□□□□□ -0.06
TUBB3-211ENST00000556536 CCL17Q92583 94 aa14.68□□□□□ -0.06
TUBB3-211ENST00000556536 RDH5Q92781 318 aa14.68□□□□□ -0.06
TUBB3-211ENST00000556536 GFI1Q99684 422 aa14.68□□□□□ -0.06
TUBB3-211ENST00000556536 METTL17Q9H7H0 456 aaPredicted RBP14.68□□□□□ -0.06
TUBB3-211ENST00000556536 FN3KRPQ9HA64 309 aa14.68□□□□□ -0.06
TUBB3-211ENST00000556536 TRAV1-2A0A0B4J238 106 aa14.67□□□□□ -0.06
TUBB3-211ENST00000556536 MAGEB3O15480 346 aa14.67□□□□□ -0.06
TUBB3-211ENST00000556536 SYNGR1O43759 233 aa14.67□□□□□ -0.06
TUBB3-211ENST00000556536 MRPS11P82912 194 aaKnown RBP14.67□□□□□ -0.06
TUBB3-211ENST00000556536 BLMHQ13867 455 aa14.67□□□□□ -0.06
TUBB3-211ENST00000556536 WDR82Q6UXN9 313 aa14.67□□□□□ -0.06
TUBB3-211ENST00000556536 GDPGP1Q6ZNW5 385 aa14.67□□□□□ -0.06
TUBB3-211ENST00000556536 LYPD6Q86Y78 171 aa14.67□□□□□ -0.06
TUBB3-211ENST00000556536 CLVS1Q8IUQ0 354 aaPredicted RBP14.67□□□□□ -0.06
TUBB3-211ENST00000556536 ZNF525Q8N782 197 aa14.67□□□□□ -0.06
TUBB3-211ENST00000556536 OR5D18Q8NGL1 313 aa14.67□□□□□ -0.06
TUBB3-211ENST00000556536 Q8TCH9 128 aa14.67□□□□□ -0.06
TUBB3-211ENST00000556536 ERGIC1Q969X5 290 aa14.67□□□□□ -0.06
TUBB3-211ENST00000556536 SLITRK2Q9H156 845 aa14.67□□□□□ -0.06
TUBB3-211ENST00000556536 BARX1Q9HBU1 254 aaPredicted RBP14.67□□□□□ -0.06
TUBB3-211ENST00000556536 NEK6Q9HC98 313 aa14.67□□□□□ -0.06
TUBB3-211ENST00000556536 TMEM106BQ9NUM4 274 aa14.67□□□□□ -0.06
TUBB3-211ENST00000556536 GSTK1Q9Y2Q3 226 aa14.67□□□□□ -0.06
TUBB3-211ENST00000556536 AK6Q9Y3D8 172 aaKnown RBP14.67□□□□□ -0.06
TUBB3-211ENST00000556536 DNHD1Q96M86 4753 aa14.67□□□□□ -0.06
TUBB3-211ENST00000556536 NAV3Q8IVL0 2385 aa14.67□□□□□ -0.06
TUBB3-211ENST00000556536 TRIM64BA6NI03 449 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms