RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 PTHP01270 115 aa2.26□□□□□ -2.05
SCFD1-221ENST00000556534 APCSP02743 223 aa2.26□□□□□ -2.05
SCFD1-221ENST00000556534 OR5AL1P0C617 328 aa2.26□□□□□ -2.05
SCFD1-221ENST00000556534 DTYMKP23919 212 aa2.26□□□□□ -2.05
SCFD1-221ENST00000556534 PAX6P26367 422 aa2.26□□□□□ -2.05
SCFD1-221ENST00000556534 ARR3P36575 388 aa2.26□□□□□ -2.05
SCFD1-221ENST00000556534 TALDO1P37837 337 aa2.26□□□□□ -2.05
SCFD1-221ENST00000556534 SPAM1P38567 509 aa2.26□□□□□ -2.05
SCFD1-221ENST00000556534 OPRK1P41145 380 aa2.26□□□□□ -2.05
SCFD1-221ENST00000556534 PITPNAQ00169 270 aa2.26□□□□□ -2.05
SCFD1-221ENST00000556534 CDK5Q00535 292 aa2.26□□□□□ -2.05
SCFD1-221ENST00000556534 INCA1Q0VD86 236 aa2.26□□□□□ -2.05
SCFD1-221ENST00000556534 USF2Q15853 346 aaPredicted RBP2.26□□□□□ -2.05
SCFD1-221ENST00000556534 C6orf99Q4VX62 202 aa2.26□□□□□ -2.05
SCFD1-221ENST00000556534 ZNF470Q6ECI4 717 aa2.26□□□□□ -2.05
SCFD1-221ENST00000556534 RTL4Q6ZR62 310 aa2.26□□□□□ -2.05
SCFD1-221ENST00000556534 TMEM25Q86YD3 366 aa2.26□□□□□ -2.05
SCFD1-221ENST00000556534 IQCF2Q8IXL9 164 aa2.26□□□□□ -2.05
SCFD1-221ENST00000556534 SLC7A5P1Q8MH63 180 aa2.26□□□□□ -2.05
SCFD1-221ENST00000556534 ZCCHC24Q8N2G6 241 aaKnown RBP2.26□□□□□ -2.05
SCFD1-221ENST00000556534 CYB561A3Q8NBI2 242 aa2.26□□□□□ -2.05
SCFD1-221ENST00000556534 UBAC2Q8NBM4 344 aa2.26□□□□□ -2.05
SCFD1-221ENST00000556534 OR2Y1Q8NGV0 311 aa2.26□□□□□ -2.05
SCFD1-221ENST00000556534 RXFP4Q8TDU9 374 aa2.26□□□□□ -2.05
SCFD1-221ENST00000556534 CCDC124Q96CT7 223 aaKnown RBP2.26□□□□□ -2.05
SCFD1-221ENST00000556534 SMARCD1Q96GM5 515 aa2.26□□□□□ -2.05
SCFD1-221ENST00000556534 ADTRPQ96IZ2 230 aa2.26□□□□□ -2.05
SCFD1-221ENST00000556534 KCNS1Q96KK3 526 aa2.26□□□□□ -2.05
SCFD1-221ENST00000556534 ZNF488Q96MN9 340 aa2.26□□□□□ -2.05
SCFD1-221ENST00000556534 GGTLC1Q9BX51 225 aa2.26□□□□□ -2.05
SCFD1-221ENST00000556534 BEX2Q9BXY8 128 aa2.26□□□□□ -2.05
SCFD1-221ENST00000556534 FGF23Q9GZV9 251 aaPredicted RBP2.26□□□□□ -2.05
SCFD1-221ENST00000556534 SLC38A10Q9HBR0 1119 aa2.26□□□□□ -2.05
SCFD1-221ENST00000556534 OR2S2Q9NQN1 319 aa2.26□□□□□ -2.05
SCFD1-221ENST00000556534 DDX19AQ9NUU7 478 aaKnown RBP2.26□□□□□ -2.05
SCFD1-221ENST00000556534 SDHAF2Q9NX18 166 aa2.26□□□□□ -2.05
SCFD1-221ENST00000556534 CHMP5Q9NZZ3 219 aa2.26□□□□□ -2.05
SCFD1-221ENST00000556534 ENPP5Q9UJA9 477 aa2.26□□□□□ -2.05
SCFD1-221ENST00000556534 TFR2Q9UP52 801 aa2.26□□□□□ -2.05
SCFD1-221ENST00000556534 VWA8A3KMH1 1905 aa2.26□□□□□ -2.05
SCFD1-221ENST00000556534 CCL15-CCL14A0A0B4J2E2 113 aa2.25□□□□□ -2.05
SCFD1-221ENST00000556534 FAM240AA0A1B0GVK7 77 aa2.25□□□□□ -2.05
SCFD1-221ENST00000556534 SLC5A10A0PJK1 596 aa2.25□□□□□ -2.05
SCFD1-221ENST00000556534 ZNF233A6NK53 670 aa2.25□□□□□ -2.05
SCFD1-221ENST00000556534 NDUFC2-KCTD14E9PQ53 114 aa2.25□□□□□ -2.05
SCFD1-221ENST00000556534 F8VP50 259 aa2.25□□□□□ -2.05
SCFD1-221ENST00000556534 RNASEK-C17orf49H0YIS7 233 aa2.25□□□□□ -2.05
SCFD1-221ENST00000556534 J3QT63 122 aa2.25□□□□□ -2.05
SCFD1-221ENST00000556534 K7EM74 188 aa2.25□□□□□ -2.05
SCFD1-221ENST00000556534 hCG_2039718K7EN88 272 aa2.25□□□□□ -2.05
SCFD1-221ENST00000556534 PSPHP1O15172 72 aa2.25□□□□□ -2.05
SCFD1-221ENST00000556534 UPK1BO75841 260 aa2.25□□□□□ -2.05
SCFD1-221ENST00000556534 SLC22A5O76082 557 aa2.25□□□□□ -2.05
SCFD1-221ENST00000556534 CD8AP01732 235 aa2.25□□□□□ -2.05
SCFD1-221ENST00000556534 SLC35G6P0C7Q6 338 aa2.25□□□□□ -2.05
SCFD1-221ENST00000556534 DNASE1L1P49184 302 aa2.25□□□□□ -2.05
SCFD1-221ENST00000556534 RGS6P49758 472 aa2.25□□□□□ -2.05
SCFD1-221ENST00000556534 C2orf54Q08AI8 447 aa2.25□□□□□ -2.05
SCFD1-221ENST00000556534 PNOCQ13519 176 aa2.25□□□□□ -2.05
SCFD1-221ENST00000556534 GUSBP1Q15486 140 aa2.25□□□□□ -2.05
SCFD1-221ENST00000556534 ZBTB6Q15916 424 aa2.25□□□□□ -2.05
SCFD1-221ENST00000556534 CCL15Q16663 113 aa2.25□□□□□ -2.05
SCFD1-221ENST00000556534 MPV17L2Q567V2 206 aa2.25□□□□□ -2.05
SCFD1-221ENST00000556534 SLC16A13Q7RTY0 426 aa2.25□□□□□ -2.05
SCFD1-221ENST00000556534 COMTD1Q86VU5 262 aa2.25□□□□□ -2.05
SCFD1-221ENST00000556534 WDFY1Q8IWB7 410 aa2.25□□□□□ -2.05
SCFD1-221ENST00000556534 ATPAF2Q8N5M1 289 aa2.25□□□□□ -2.05
SCFD1-221ENST00000556534 OR4K5Q8NGD3 323 aa2.25□□□□□ -2.05
SCFD1-221ENST00000556534 ANGPTL6Q8NI99 470 aa2.25□□□□□ -2.05
SCFD1-221ENST00000556534 LINC01560Q8TB33 94 aa2.25□□□□□ -2.05
SCFD1-221ENST00000556534 CIRBP-AS1Q8TBR5 109 aa2.25□□□□□ -2.05
SCFD1-221ENST00000556534 TMEM239Q8WW34 195 aa2.25□□□□□ -2.05
SCFD1-221ENST00000556534 GHSRQ92847 366 aa2.25□□□□□ -2.05
SCFD1-221ENST00000556534 FLYWCH2Q96CP2 140 aaKnown RBP2.25□□□□□ -2.05
SCFD1-221ENST00000556534 RNF157Q96PX1 679 aa2.25□□□□□ -2.05
SCFD1-221ENST00000556534 OR4K3Q96R72 315 aa2.25□□□□□ -2.05
SCFD1-221ENST00000556534 CIB1Q99828 191 aa2.25□□□□□ -2.05
SCFD1-221ENST00000556534 TIMM29Q9BSF4 260 aa2.25□□□□□ -2.05
SCFD1-221ENST00000556534 TOLLIPQ9H0E2 274 aa2.25□□□□□ -2.05
SCFD1-221ENST00000556534 ACOT13Q9NPJ3 140 aa2.25□□□□□ -2.05
SCFD1-221ENST00000556534 HEBP1Q9NRV9 189 aa2.25□□□□□ -2.05
SCFD1-221ENST00000556534 MS4A12Q9NXJ0 267 aa2.25□□□□□ -2.05
SCFD1-221ENST00000556534 NDRG2Q9UN36 371 aaKnown RBP2.25□□□□□ -2.05
SCFD1-221ENST00000556534 CFL2Q9Y281 166 aa2.25□□□□□ -2.05
SCFD1-221ENST00000556534 ANKRD12Q6UB98 2062 aa2.24□□□□□ -2.05
SCFD1-221ENST00000556534 TRAV19A0A0A6YYK7 116 aa2.24□□□□□ -2.05
SCFD1-221ENST00000556534 TRAV8-4A0A0B4J246 113 aa2.24□□□□□ -2.05
SCFD1-221ENST00000556534 H0YJW9 148 aa2.24□□□□□ -2.05
SCFD1-221ENST00000556534 TAAR5O14804 337 aa2.24□□□□□ -2.05
SCFD1-221ENST00000556534 ENSAO43768 121 aaKnown RBP2.24□□□□□ -2.05
SCFD1-221ENST00000556534 CDRT1O95170 752 aa2.24□□□□□ -2.05
SCFD1-221ENST00000556534 IGLV2-8P01709 118 aa2.24□□□□□ -2.05
SCFD1-221ENST00000556534 P01737 135 aa2.24□□□□□ -2.05
SCFD1-221ENST00000556534 HSPD1P10809 573 aaKnown RBP2.24□□□□□ -2.05
SCFD1-221ENST00000556534 CXCL12P48061 93 aa2.24□□□□□ -2.05
SCFD1-221ENST00000556534 MTPNP58546 118 aa2.24□□□□□ -2.05
SCFD1-221ENST00000556534 UBE2KP61086 200 aa2.24□□□□□ -2.05
SCFD1-221ENST00000556534 KDSRQ06136 332 aa2.24□□□□□ -2.05
SCFD1-221ENST00000556534 SLAMF1Q13291 335 aa2.24□□□□□ -2.05
SCFD1-221ENST00000556534 ANGPT1Q15389 498 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms