RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 ZNF273Q14593 569 aa11.16□□□□□ -0.62
ACTN1-219ENST00000556432 CASC10Q5T4H9 136 aa11.16□□□□□ -0.62
ACTN1-219ENST00000556432 MRPL41Q8IXM3 137 aaKnown RBP11.16□□□□□ -0.62
ACTN1-219ENST00000556432 LINC00471Q8N535 108 aa11.16□□□□□ -0.62
ACTN1-219ENST00000556432 C11orf42Q8N5U0 333 aa11.16□□□□□ -0.62
ACTN1-219ENST00000556432 FAM86B1Q8N7N1 296 aa11.16□□□□□ -0.62
ACTN1-219ENST00000556432 ZNF511Q8NB15 262 aa11.16□□□□□ -0.62
ACTN1-219ENST00000556432 OR6K6Q8NGW6 343 aa11.16□□□□□ -0.62
ACTN1-219ENST00000556432 MUC7Q8TAX7 377 aa11.16□□□□□ -0.62
ACTN1-219ENST00000556432 ZNRF4Q8WWF5 429 aa11.16□□□□□ -0.62
ACTN1-219ENST00000556432 SDSLQ96GA7 329 aa11.16□□□□□ -0.62
ACTN1-219ENST00000556432 ATP6V1G3Q96LB4 118 aa11.16□□□□□ -0.62
ACTN1-219ENST00000556432 ASCL2Q99929 193 aa11.16□□□□□ -0.62
ACTN1-219ENST00000556432 CMTM6Q9NX76 183 aa11.16□□□□□ -0.62
ACTN1-219ENST00000556432 EPPK1P58107 5090 aaKnown RBP11.15□□□□□ -0.62
ACTN1-219ENST00000556432 RYR2Q92736 4967 aa11.15□□□□□ -0.62
ACTN1-219ENST00000556432 RFPL4AA6NLU0 287 aa11.15□□□□□ -0.62
ACTN1-219ENST00000556432 RFPL4AL1F8VTS6 287 aa11.15□□□□□ -0.62
ACTN1-219ENST00000556432 GYPBP06028 91 aa11.15□□□□□ -0.62
ACTN1-219ENST00000556432 LPLP06858 475 aa11.15□□□□□ -0.62
ACTN1-219ENST00000556432 NCK1P16333 377 aa11.15□□□□□ -0.62
ACTN1-219ENST00000556432 KLF10Q13118 480 aa11.15□□□□□ -0.62
ACTN1-219ENST00000556432 SMIM21Q3B7S5 101 aa11.15□□□□□ -0.62
ACTN1-219ENST00000556432 KCTD18Q6PI47 426 aaPredicted RBP11.15□□□□□ -0.62
ACTN1-219ENST00000556432 C10orf99Q6UWK7 81 aa11.15□□□□□ -0.62
ACTN1-219ENST00000556432 ARPINQ7Z6K5 226 aa11.15□□□□□ -0.62
ACTN1-219ENST00000556432 OR52L1Q8NGH7 329 aa11.15□□□□□ -0.62
ACTN1-219ENST00000556432 ZNF671Q8TAW3 534 aa11.15□□□□□ -0.62
ACTN1-219ENST00000556432 NDNFQ8TB73 568 aa11.15□□□□□ -0.62
ACTN1-219ENST00000556432 FAM81AQ8TBF8 368 aa11.15□□□□□ -0.62
ACTN1-219ENST00000556432 HPSE2Q8WWQ2 592 aa11.15□□□□□ -0.62
ACTN1-219ENST00000556432 AKR1E2Q96JD6 320 aa11.15□□□□□ -0.62
ACTN1-219ENST00000556432 SIKE1Q9BRV8 207 aa11.15□□□□□ -0.62
ACTN1-219ENST00000556432 FGF23Q9GZV9 251 aaPredicted RBP11.15□□□□□ -0.62
ACTN1-219ENST00000556432 RGCCQ9H4X1 137 aa11.15□□□□□ -0.62
ACTN1-219ENST00000556432 INTS9Q9NV88 658 aaKnown RBP11.15□□□□□ -0.62
ACTN1-219ENST00000556432 GAR1Q9NY12 217 aaKnown RBP11.15□□□□□ -0.62
ACTN1-219ENST00000556432 MEX3AA1L020 520 aaKnown RBP11.14□□□□□ -0.63
ACTN1-219ENST00000556432 ODF3BA8MYP8 253 aa11.14□□□□□ -0.63
ACTN1-219ENST00000556432 ACKR3P25106 362 aa11.14□□□□□ -0.63
ACTN1-219ENST00000556432 DCTDP32321 178 aa11.14□□□□□ -0.63
ACTN1-219ENST00000556432 DYNLT3P51808 116 aa11.14□□□□□ -0.63
ACTN1-219ENST00000556432 GNG3P63215 75 aa11.14□□□□□ -0.63
ACTN1-219ENST00000556432 ABCA11PQ4W5N1 156 aa11.14□□□□□ -0.63
ACTN1-219ENST00000556432 LDLRAD2Q5SZI1 272 aa11.14□□□□□ -0.63
ACTN1-219ENST00000556432 ZNF561Q8N587 486 aa11.14□□□□□ -0.63
ACTN1-219ENST00000556432 CD177Q8N6Q3 437 aa11.14□□□□□ -0.63
ACTN1-219ENST00000556432 RCN3Q96D15 328 aa11.14□□□□□ -0.63
ACTN1-219ENST00000556432 LYZL4Q96KX0 146 aa11.14□□□□□ -0.63
ACTN1-219ENST00000556432 VIPAS39Q9H9C1 493 aa11.14□□□□□ -0.63
ACTN1-219ENST00000556432 PALMDQ9NP74 551 aa11.14□□□□□ -0.63
ACTN1-219ENST00000556432 MRGBPQ9NV56 204 aa11.14□□□□□ -0.63
ACTN1-219ENST00000556432 ZNF319Q9P2F9 582 aa11.14□□□□□ -0.63
ACTN1-219ENST00000556432 NUDT19A8MXV4 375 aa11.13□□□□□ -0.63
ACTN1-219ENST00000556432 ZNF732B4DXR9 585 aa11.13□□□□□ -0.63
ACTN1-219ENST00000556432 H0YHG0 523 aa11.13□□□□□ -0.63
ACTN1-219ENST00000556432 SLC22A2O15244 555 aa11.13□□□□□ -0.63
ACTN1-219ENST00000556432 MTRF1O75570 445 aaKnown RBP11.13□□□□□ -0.63
ACTN1-219ENST00000556432 ZFPL1O95159 310 aa11.13□□□□□ -0.63
ACTN1-219ENST00000556432 GADD45GO95257 159 aa11.13□□□□□ -0.63
ACTN1-219ENST00000556432 CST4P01036 141 aa11.13□□□□□ -0.63
ACTN1-219ENST00000556432 PRDX2P32119 198 aa11.13□□□□□ -0.63
ACTN1-219ENST00000556432 IFNGR2P38484 337 aa11.13□□□□□ -0.63
ACTN1-219ENST00000556432 CEBPDP49716 269 aaPredicted RBP11.13□□□□□ -0.63
ACTN1-219ENST00000556432 SMIM11AP58511 58 aa11.13□□□□□ -0.63
ACTN1-219ENST00000556432 CBX1P83916 185 aa11.13□□□□□ -0.63
ACTN1-219ENST00000556432 FAM76BQ5HYJ3 339 aa11.13□□□□□ -0.63
ACTN1-219ENST00000556432 CEP78Q5JTW2 689 aa11.13□□□□□ -0.63
ACTN1-219ENST00000556432 C9orf152Q5JTZ5 239 aa11.13□□□□□ -0.63
ACTN1-219ENST00000556432 ZNF626Q68DY1 528 aa11.13□□□□□ -0.63
ACTN1-219ENST00000556432 HAGHLQ6PII5 290 aaPredicted RBP11.13□□□□□ -0.63
ACTN1-219ENST00000556432 PRSS45Q7RTY3 260 aa11.13□□□□□ -0.63
ACTN1-219ENST00000556432 SLC15A3Q8IY34 581 aa11.13□□□□□ -0.63
ACTN1-219ENST00000556432 Q8NFD4 153 aa11.13□□□□□ -0.63
ACTN1-219ENST00000556432 OR6N2Q8NGY6 317 aa11.13□□□□□ -0.63
ACTN1-219ENST00000556432 BCAS4Q8TDM0 211 aa11.13□□□□□ -0.63
ACTN1-219ENST00000556432 KCTD14Q9BQ13 255 aaPredicted RBP11.13□□□□□ -0.63
ACTN1-219ENST00000556432 EGLN3Q9H6Z9 239 aa11.13□□□□□ -0.63
ACTN1-219ENST00000556432 V9GYQ6 96 aa11.13□□□□□ -0.63
ACTN1-219ENST00000556432 EDF1O60869 148 aaKnown RBP11.12□□□□□ -0.63
ACTN1-219ENST00000556432 H2BFMP0C1H6 154 aa11.12□□□□□ -0.63
ACTN1-219ENST00000556432 NUDT2P50583 147 aa11.12□□□□□ -0.63
ACTN1-219ENST00000556432 RAB25P57735 213 aa11.12□□□□□ -0.63
ACTN1-219ENST00000556432 SF3A3Q12874 501 aaKnown RBP eCLIP11.12□□□□□ -0.632e-10■■■■■ 69.2
ACTN1-219ENST00000556432 TEX30Q5JUR7 227 aa11.12□□□□□ -0.63
ACTN1-219ENST00000556432 NKAPLQ5M9Q1 402 aa11.12□□□□□ -0.63
ACTN1-219ENST00000556432 ZNF770Q6IQ21 691 aaPredicted RBP11.12□□□□□ -0.63
ACTN1-219ENST00000556432 LCN8Q6JVE9 175 aa11.12□□□□□ -0.63
ACTN1-219ENST00000556432 ETV3LQ6ZN32 361 aa11.12□□□□□ -0.63
ACTN1-219ENST00000556432 ACP7Q6ZNF0 438 aa11.12□□□□□ -0.63
ACTN1-219ENST00000556432 CALHM1Q8IU99 346 aa11.12□□□□□ -0.63
ACTN1-219ENST00000556432 SLC37A3Q8NCC5 494 aa11.12□□□□□ -0.63
ACTN1-219ENST00000556432 OR11H6Q8NGC7 330 aa11.12□□□□□ -0.63
ACTN1-219ENST00000556432 AQP3Q92482 292 aa11.12□□□□□ -0.63
ACTN1-219ENST00000556432 DHRS1Q96LJ7 313 aa11.12□□□□□ -0.63
ACTN1-219ENST00000556432 ZNF488Q96MN9 340 aa11.12□□□□□ -0.63
ACTN1-219ENST00000556432 PRR25Q96S07 402 aa11.12□□□□□ -0.63
ACTN1-219ENST00000556432 FUZQ9BT04 418 aa11.12□□□□□ -0.63
ACTN1-219ENST00000556432 ABHD6Q9BV23 337 aa11.12□□□□□ -0.63
ACTN1-219ENST00000556432 OR51I2Q9H344 312 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms