RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 OR1J2Q8NGS2 313 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 FNDC9Q8TBE3 224 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 ENKURQ8TC29 256 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 OR51E1Q8TCB6 317 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 ITLN2Q8WWU7 325 aaPredicted RBP5.92□□□□□ -1.46
SLIRP-204ENST00000555890 RAB24Q969Q5 203 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 FAM3DQ96BQ1 224 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 SARAFQ96BY9 339 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 HAVCR1Q96D42 359 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 FBXO17Q96EF6 278 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 SORCS2Q96PQ0 1159 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 ALKBH3Q96Q83 286 aaPredicted RBP5.92□□□□□ -1.46
SLIRP-204ENST00000555890 ABHD1Q96SE0 405 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 OR10A2Q9H208 303 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 CNTD2Q9H8S5 307 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 RNF121Q9H920 327 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 PLEKHA1Q9HB21 404 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 NEK6Q9HC98 313 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 TMEM138Q9NPI0 162 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 GPR84Q9NQS5 396 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 SLC7A10Q9NS82 523 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 RHBDL2Q9NX52 303 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 TBC1D24Q9ULP9 559 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 LIPGQ9Y5X9 500 aa5.92□□□□□ -1.46
SLIRP-204ENST00000555890 FAM240BA0A1B0GVZ2 78 aa5.91□□□□□ -1.46
SLIRP-204ENST00000555890 METTL21EPA6NDL7 271 aa5.91□□□□□ -1.46
SLIRP-204ENST00000555890 OR6C6A6NF89 314 aa5.91□□□□□ -1.46
SLIRP-204ENST00000555890 A6NIN4 97 aa5.91□□□□□ -1.46
SLIRP-204ENST00000555890 M0R135 149 aa5.91□□□□□ -1.46
SLIRP-204ENST00000555890 PLA2G10O15496 165 aa5.91□□□□□ -1.46
SLIRP-204ENST00000555890 LYRM1O43325 122 aa5.91□□□□□ -1.46
SLIRP-204ENST00000555890 VENTXO95231 258 aa5.91□□□□□ -1.46
SLIRP-204ENST00000555890 ECDO95905 644 aaPredicted RBP5.91□□□□□ -1.46
SLIRP-204ENST00000555890 HNRNPCP07910 306 aaKnown RBP eCLIP5.91□□□□□ -1.46
SLIRP-204ENST00000555890 GSTT2BP0CG30 244 aa5.91□□□□□ -1.46
SLIRP-204ENST00000555890 SLC2A1P11166 492 aa5.91□□□□□ -1.46
SLIRP-204ENST00000555890 RAC2P15153 192 aa5.91□□□□□ -1.46
SLIRP-204ENST00000555890 ARSBP15848 533 aa5.91□□□□□ -1.46
SLIRP-204ENST00000555890 SPNP16150 400 aa5.91□□□□□ -1.46
SLIRP-204ENST00000555890 ZNF32P17041 273 aa5.91□□□□□ -1.46
SLIRP-204ENST00000555890 OTX1P32242 354 aaPredicted RBP5.91□□□□□ -1.46
SLIRP-204ENST00000555890 GDNFP39905 211 aa5.91□□□□□ -1.46
SLIRP-204ENST00000555890 MNDAP41218 407 aa5.91□□□□□ -1.46
SLIRP-204ENST00000555890 HTR5AP47898 357 aa5.91□□□□□ -1.46
SLIRP-204ENST00000555890 POU3F4P49335 361 aa5.91□□□□□ -1.46
SLIRP-204ENST00000555890 AP3S2P59780 193 aa5.91□□□□□ -1.46
SLIRP-204ENST00000555890 IL13RA1P78552 427 aa5.91□□□□□ -1.46
SLIRP-204ENST00000555890 SPOCK1Q08629 439 aa5.91□□□□□ -1.46
SLIRP-204ENST00000555890 ZNF169Q14929 603 aaPredicted RBP5.91□□□□□ -1.46
SLIRP-204ENST00000555890 FAM189A2Q15884 450 aa5.91□□□□□ -1.46
SLIRP-204ENST00000555890 C2orf76Q3KRA6 126 aa5.91□□□□□ -1.46
SLIRP-204ENST00000555890 C1orf100Q5SVJ3 147 aa5.91□□□□□ -1.46
SLIRP-204ENST00000555890 TMEM69Q5SWH9 247 aa5.91□□□□□ -1.46
SLIRP-204ENST00000555890 GLYATL3Q5SZD4 288 aa5.91□□□□□ -1.46
SLIRP-204ENST00000555890 FAM166AQ6J272 317 aa5.91□□□□□ -1.46
SLIRP-204ENST00000555890 ZNF774Q6NX45 483 aa5.91□□□□□ -1.46
SLIRP-204ENST00000555890 TMEM53Q6P2H8 277 aa5.91□□□□□ -1.46
SLIRP-204ENST00000555890 ANKRD16Q6P6B7 361 aa5.91□□□□□ -1.46
SLIRP-204ENST00000555890 PLET1Q6UQ28 207 aa5.91□□□□□ -1.46
SLIRP-204ENST00000555890 LINGO2Q7L985 606 aa5.91□□□□□ -1.46
SLIRP-204ENST00000555890 NRARPQ7Z6K4 114 aa5.91□□□□□ -1.46
SLIRP-204ENST00000555890 DPPA2Q7Z7J5 298 aa5.91□□□□□ -1.46
SLIRP-204ENST00000555890 SKA3Q8IX90 412 aa5.91□□□□□ -1.46
SLIRP-204ENST00000555890 UBE2J2Q8N2K1 259 aa5.91□□□□□ -1.46
SLIRP-204ENST00000555890 TOMM5Q8N4H5 51 aa5.91□□□□□ -1.46
SLIRP-204ENST00000555890 DTX3Q8N9I9 347 aa5.91□□□□□ -1.46
SLIRP-204ENST00000555890 ST6GALNAC3Q8NDV1 305 aa5.91□□□□□ -1.46
SLIRP-204ENST00000555890 OR51D1Q8NGF3 324 aa5.91□□□□□ -1.46
SLIRP-204ENST00000555890 FCAMRQ8WWV6 532 aa5.91□□□□□ -1.46
SLIRP-204ENST00000555890 PP6455Q8WZ26 134 aa5.91□□□□□ -1.46
SLIRP-204ENST00000555890 C10orf35Q96D05 121 aa5.91□□□□□ -1.46
SLIRP-204ENST00000555890 ZNF799Q96GE5 643 aa5.91□□□□□ -1.46
SLIRP-204ENST00000555890 GMPPAQ96IJ6 420 aaPredicted RBP5.91□□□□□ -1.46
SLIRP-204ENST00000555890 FAM71F1Q96KD3 344 aaPredicted RBP5.91□□□□□ -1.46
SLIRP-204ENST00000555890 C7orf50Q9BRJ6 194 aaKnown RBP5.91□□□□□ -1.46
SLIRP-204ENST00000555890 UQCC2Q9BRT2 126 aa5.91□□□□□ -1.46
SLIRP-204ENST00000555890 OR2H1Q9GZK4 316 aa5.91□□□□□ -1.46
SLIRP-204ENST00000555890 C11orf54Q9H0W9 315 aaPredicted RBP5.91□□□□□ -1.46
SLIRP-204ENST00000555890 RBFOX1Q9NWB1 397 aaKnown RBP5.91□□□□□ -1.46
SLIRP-204ENST00000555890 SPRR3Q9UBC9 169 aa5.91□□□□□ -1.46
SLIRP-204ENST00000555890 ZNF391Q9UJN7 358 aa5.91□□□□□ -1.46
SLIRP-204ENST00000555890 OSGIN2Q9Y236 505 aa5.91□□□□□ -1.46
SLIRP-204ENST00000555890 A0A0A6YYH2 397 aa5.9□□□□□ -1.46
SLIRP-204ENST00000555890 A0A1B0GUH1 482 aa5.9□□□□□ -1.46
SLIRP-204ENST00000555890 LOC390937A0A1W2PQ73 354 aa5.9□□□□□ -1.46
SLIRP-204ENST00000555890 A6NJ64 397 aa5.9□□□□□ -1.46
SLIRP-204ENST00000555890 NUDT19A8MXV4 375 aa5.9□□□□□ -1.46
SLIRP-204ENST00000555890 GABARAPH6UMI1 98 aa5.9□□□□□ -1.46
SLIRP-204ENST00000555890 C19orf84I3L1E1 186 aa5.9□□□□□ -1.46
SLIRP-204ENST00000555890 XRCC3O43542 346 aa5.9□□□□□ -1.46
SLIRP-204ENST00000555890 SYNGR3O43761 229 aa5.9□□□□□ -1.46
SLIRP-204ENST00000555890 LMX1BO60663 402 aa5.9□□□□□ -1.46
SLIRP-204ENST00000555890 DHRS3O75911 302 aa5.9□□□□□ -1.46
SLIRP-204ENST00000555890 IGHV3-9P01782 118 aa5.9□□□□□ -1.46
SLIRP-204ENST00000555890 LCATP04180 440 aa5.9□□□□□ -1.46
SLIRP-204ENST00000555890 ALDOBP05062 364 aa5.9□□□□□ -1.46
SLIRP-204ENST00000555890 HCKP08631 526 aa5.9□□□□□ -1.46
SLIRP-204ENST00000555890 ITGA5P08648 1049 aa5.9□□□□□ -1.46
SLIRP-204ENST00000555890 CRYGSP22914 178 aa5.9□□□□□ -1.46
SLIRP-204ENST00000555890 CDK2P24941 298 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms