RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 GALEQ14376 348 aa11.4□□□□□ -0.58
SHMT2-219ENST00000555563 ARMCX4Q5H9R4 360 aa11.4□□□□□ -0.58
SHMT2-219ENST00000555563 OGFRL1Q5TC84 451 aaPredicted RBP11.4□□□□□ -0.58
SHMT2-219ENST00000555563 STUMQ69YW2 141 aa11.4□□□□□ -0.58
SHMT2-219ENST00000555563 FDX2Q6P4F2 183 aa11.4□□□□□ -0.58
SHMT2-219ENST00000555563 KCTD20Q7Z5Y7 419 aa11.4□□□□□ -0.58
SHMT2-219ENST00000555563 LHFPL3Q86UP9 236 aa11.4□□□□□ -0.58
SHMT2-219ENST00000555563 RDH10Q8IZV5 341 aa11.4□□□□□ -0.58
SHMT2-219ENST00000555563 FAM216BQ8N7L0 139 aa11.4□□□□□ -0.58
SHMT2-219ENST00000555563 OR52I1Q8NGK6 324 aa11.4□□□□□ -0.58
SHMT2-219ENST00000555563 CNIH3Q8TBE1 160 aa11.4□□□□□ -0.58
SHMT2-219ENST00000555563 AQP3Q92482 292 aa11.4□□□□□ -0.58
SHMT2-219ENST00000555563 C12orf43Q96C57 262 aaKnown RBP11.4□□□□□ -0.58
SHMT2-219ENST00000555563 CCL13Q99616 98 aa11.4□□□□□ -0.58
SHMT2-219ENST00000555563 NUDT16L1Q9BRJ7 211 aaKnown RBP11.4□□□□□ -0.58
SHMT2-219ENST00000555563 RASSF4Q9H2L5 321 aa11.4□□□□□ -0.58
SHMT2-219ENST00000555563 SNTG1Q9NSN8 517 aa11.4□□□□□ -0.58
SHMT2-219ENST00000555563 ERVK13-1Q9NX77 482 aa11.4□□□□□ -0.58
SHMT2-219ENST00000555563 FRRS1LQ9P0K9 344 aa11.4□□□□□ -0.58
SHMT2-219ENST00000555563 KAAG1Q9UBP8 84 aa11.4□□□□□ -0.58
SHMT2-219ENST00000555563 DNAJB11Q9UBS4 358 aa11.4□□□□□ -0.58
SHMT2-219ENST00000555563 RPL36Q9Y3U8 105 aaKnown RBP11.4□□□□□ -0.58
SHMT2-219ENST00000555563 WNK2Q9Y3S1 2297 aa11.4□□□□□ -0.58
SHMT2-219ENST00000555563 COL6A5A8TX70 2615 aa11.39□□□□□ -0.59
SHMT2-219ENST00000555563 KIR2DS1A0A191URI9 304 aa11.39□□□□□ -0.59
SHMT2-219ENST00000555563 ERICH4A6NGS2 130 aa11.39□□□□□ -0.59
SHMT2-219ENST00000555563 J3QLW9 94 aa11.39□□□□□ -0.59
SHMT2-219ENST00000555563 DVL1O14640 695 aa11.39□□□□□ -0.59
SHMT2-219ENST00000555563 TCF21O43680 179 aa11.39□□□□□ -0.59
SHMT2-219ENST00000555563 ENSAO43768 121 aaKnown RBP11.39□□□□□ -0.59
SHMT2-219ENST00000555563 RGS9O75916 674 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-219ENST00000555563 TFF1P04155 84 aa11.39□□□□□ -0.59
SHMT2-219ENST00000555563 HTR1AP08908 422 aa11.39□□□□□ -0.59
SHMT2-219ENST00000555563 ZNF19P17023 458 aa11.39□□□□□ -0.59
SHMT2-219ENST00000555563 AMY2BP19961 511 aa11.39□□□□□ -0.59
SHMT2-219ENST00000555563 ADARB1P78563 741 aaKnown RBP11.39□□□□□ -0.59
SHMT2-219ENST00000555563 KRTAP24-1Q3LI83 254 aa11.39□□□□□ -0.59
SHMT2-219ENST00000555563 KLF17Q5JT82 389 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-219ENST00000555563 SYS1Q8N2H4 156 aa11.39□□□□□ -0.59
SHMT2-219ENST00000555563 FGFRL1Q8N441 504 aa11.39□□□□□ -0.59
SHMT2-219ENST00000555563 OR5T2Q8NGG2 359 aa11.39□□□□□ -0.59
SHMT2-219ENST00000555563 NPRL2Q8WTW4 380 aa11.39□□□□□ -0.59
SHMT2-219ENST00000555563 MRPL48Q96GC5 212 aaKnown RBP11.39□□□□□ -0.59
SHMT2-219ENST00000555563 ZNF649Q9BS31 505 aa11.39□□□□□ -0.59
SHMT2-219ENST00000555563 ADI1Q9BV57 179 aa11.39□□□□□ -0.59
SHMT2-219ENST00000555563 CHST5Q9GZS9 411 aa11.39□□□□□ -0.59
SHMT2-219ENST00000555563 OCEL1Q9H607 264 aa11.39□□□□□ -0.59
SHMT2-219ENST00000555563 ISG20L2Q9H9L3 353 aaKnown RBP11.39□□□□□ -0.59
SHMT2-219ENST00000555563 INPP5EQ9NRR6 644 aa11.39□□□□□ -0.59
SHMT2-219ENST00000555563 MRPS18AQ9NVS2 196 aaKnown RBP11.39□□□□□ -0.59
SHMT2-219ENST00000555563 NKX6-3A6NJ46 265 aa11.38□□□□□ -0.59
SHMT2-219ENST00000555563 J3QT63 122 aa11.38□□□□□ -0.59
SHMT2-219ENST00000555563 SELLP14151 372 aa11.38□□□□□ -0.59
SHMT2-219ENST00000555563 HAAOP46952 286 aa11.38□□□□□ -0.59
SHMT2-219ENST00000555563 TTC23Q5W5X9 447 aa11.38□□□□□ -0.59
SHMT2-219ENST00000555563 SLC36A1Q7Z2H8 476 aa11.38□□□□□ -0.59
SHMT2-219ENST00000555563 DHRSXQ8N5I4 330 aa11.38□□□□□ -0.59
SHMT2-219ENST00000555563 SETD9Q8NE22 299 aa11.38□□□□□ -0.59
SHMT2-219ENST00000555563 CCDC54Q8NEL0 328 aa11.38□□□□□ -0.59
SHMT2-219ENST00000555563 OR10AC1Q8NH08 325 aa11.38□□□□□ -0.59
SHMT2-219ENST00000555563 TRMT10AQ8TBZ6 339 aaKnown RBP11.38□□□□□ -0.59
SHMT2-219ENST00000555563 TMEM158Q8WZ71 300 aa11.38□□□□□ -0.59
SHMT2-219ENST00000555563 ST8SIA4Q92187 359 aa11.38□□□□□ -0.59
SHMT2-219ENST00000555563 SLC6A7Q99884 636 aa11.38□□□□□ -0.59
SHMT2-219ENST00000555563 NLKQ9UBE8 527 aa11.38□□□□□ -0.59
SHMT2-219ENST00000555563 OR4C45A6NMZ5 311 aa11.37□□□□□ -0.59
SHMT2-219ENST00000555563 SYNGR1O43759 233 aa11.37□□□□□ -0.59
SHMT2-219ENST00000555563 GATBO75879 557 aaKnown RBP11.37□□□□□ -0.59
SHMT2-219ENST00000555563 ISG15P05161 165 aa11.37□□□□□ -0.59
SHMT2-219ENST00000555563 GLRA1P23415 457 aa11.37□□□□□ -0.59
SHMT2-219ENST00000555563 CCR9P51686 369 aa11.37□□□□□ -0.59
SHMT2-219ENST00000555563 FGF12P61328 243 aa11.37□□□□□ -0.59
SHMT2-219ENST00000555563 IKZF1Q13422 519 aa11.37□□□□□ -0.59
SHMT2-219ENST00000555563 ALKBH1Q13686 389 aaKnown RBP11.37□□□□□ -0.59
SHMT2-219ENST00000555563 UBE2V2Q15819 145 aa11.37□□□□□ -0.59
SHMT2-219ENST00000555563 KLHL22Q53GT1 634 aa11.37□□□□□ -0.59
SHMT2-219ENST00000555563 TMEM244Q5VVB8 128 aa11.37□□□□□ -0.59
SHMT2-219ENST00000555563 CD276Q5ZPR3 534 aa11.37□□□□□ -0.59
SHMT2-219ENST00000555563 ZNF573Q86YE8 665 aa11.37□□□□□ -0.59
SHMT2-219ENST00000555563 PHC2Q8IXK0 858 aa11.37□□□□□ -0.59
SHMT2-219ENST00000555563 POC1AQ8NBT0 407 aa11.37□□□□□ -0.59
SHMT2-219ENST00000555563 OR51A4Q8NGJ6 313 aa11.37□□□□□ -0.59
SHMT2-219ENST00000555563 ANGPTL6Q8NI99 470 aa11.37□□□□□ -0.59
SHMT2-219ENST00000555563 ZNF671Q8TAW3 534 aa11.37□□□□□ -0.59
SHMT2-219ENST00000555563 C22orf15Q8WYQ4 148 aa11.37□□□□□ -0.59
SHMT2-219ENST00000555563 TMIGD2Q96BF3 282 aa11.37□□□□□ -0.59
SHMT2-219ENST00000555563 UPRTQ96BW1 309 aa11.37□□□□□ -0.59
SHMT2-219ENST00000555563 ADAT3Q96EY9 351 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-219ENST00000555563 ZNF488Q96MN9 340 aa11.37□□□□□ -0.59
SHMT2-219ENST00000555563 GAFA1Q96PS6 74 aa11.37□□□□□ -0.59
SHMT2-219ENST00000555563 MYCBPQ99417 103 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-219ENST00000555563 JAM3Q9BX67 310 aa11.37□□□□□ -0.59
SHMT2-219ENST00000555563 DNTTIP1Q9H147 329 aa11.37□□□□□ -0.59
SHMT2-219ENST00000555563 DCLRE1BQ9H816 532 aa11.37□□□□□ -0.59
SHMT2-219ENST00000555563 NKX1-2Q9UD57 310 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-219ENST00000555563 NUP50Q9UKX7 468 aa11.37□□□□□ -0.59
SHMT2-219ENST00000555563 POLDIP2Q9Y2S7 368 aa11.37□□□□□ -0.59
SHMT2-219ENST00000555563 DOCK11Q5JSL3 2073 aa11.37□□□□□ -0.59
SHMT2-219ENST00000555563 IGKV1D-17A0A075B6S4 117 aa11.36□□□□□ -0.59
SHMT2-219ENST00000555563 IGKV1-27A0A075B6S5 117 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms