RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 FBXW5Q969U6 566 aa8.5□□□□□ -1.05
PSEN1-213ENST00000555386 ZNF75AQ96N20 296 aa8.5□□□□□ -1.05
PSEN1-213ENST00000555386 TMEM204Q9BSN7 226 aa8.5□□□□□ -1.05
PSEN1-213ENST00000555386 BEX2Q9BXY8 128 aa8.5□□□□□ -1.05
PSEN1-213ENST00000555386 FBXL3Q9UKT7 428 aa8.5□□□□□ -1.05
PSEN1-213ENST00000555386 LAMP3Q9UQV4 416 aa8.5□□□□□ -1.05
PSEN1-213ENST00000555386 RAI1Q7Z5J4 1906 aaPredicted RBP8.5□□□□□ -1.05
PSEN1-213ENST00000555386 VPS13CQ709C8 3753 aa8.5□□□□□ -1.05
PSEN1-213ENST00000555386 CREBBPQ92793 2442 aa8.49□□□□□ -1.05
PSEN1-213ENST00000555386 TRAV6A0A075B6T7 132 aa8.49□□□□□ -1.05
PSEN1-213ENST00000555386 TRAV8-7A0A075B6U6 113 aa8.49□□□□□ -1.05
PSEN1-213ENST00000555386 LOC100509620A0A075B734 347 aa8.49□□□□□ -1.05
PSEN1-213ENST00000555386 ANKRD20A5PA0PJZ0 165 aa8.49□□□□□ -1.05
PSEN1-213ENST00000555386 MEGF11A6BM72 1044 aa8.49□□□□□ -1.05
PSEN1-213ENST00000555386 SLC17A2O00624 439 aa8.49□□□□□ -1.05
PSEN1-213ENST00000555386 PEX14O75381 377 aa8.49□□□□□ -1.05
PSEN1-213ENST00000555386 GOSR1O95249 250 aa8.49□□□□□ -1.05
PSEN1-213ENST00000555386 ISG15P05161 165 aa8.49□□□□□ -1.05
PSEN1-213ENST00000555386 CD2P06729 351 aa8.49□□□□□ -1.05
PSEN1-213ENST00000555386 DBHP09172 617 aa8.49□□□□□ -1.05
PSEN1-213ENST00000555386 ANXA3P12429 323 aa8.49□□□□□ -1.05
PSEN1-213ENST00000555386 CDK2P24941 298 aa8.49□□□□□ -1.05
PSEN1-213ENST00000555386 RCVRNP35243 200 aa8.49□□□□□ -1.05
PSEN1-213ENST00000555386 THBS4P35443 961 aa8.49□□□□□ -1.05
PSEN1-213ENST00000555386 TAS2R20P59543 309 aa8.49□□□□□ -1.05
PSEN1-213ENST00000555386 HGFACQ04756 655 aa8.49□□□□□ -1.05
PSEN1-213ENST00000555386 EIF2B1Q14232 305 aaKnown RBP8.49□□□□□ -1.05
PSEN1-213ENST00000555386 FCN2Q15485 313 aa8.49□□□□□ -1.05
PSEN1-213ENST00000555386 KCNMB1Q16558 191 aa8.49□□□□□ -1.05
PSEN1-213ENST00000555386 SPATA46Q5T0L3 261 aa8.49□□□□□ -1.05
PSEN1-213ENST00000555386 PRSS45Q7RTY3 260 aa8.49□□□□□ -1.05
PSEN1-213ENST00000555386 DCXRQ7Z4W1 244 aa8.49□□□□□ -1.05
PSEN1-213ENST00000555386 DPPA2Q7Z7J5 298 aa8.49□□□□□ -1.05
PSEN1-213ENST00000555386 FAM169BQ8N8A8 192 aa8.49□□□□□ -1.05
PSEN1-213ENST00000555386 GJC3Q8NFK1 279 aa8.49□□□□□ -1.05
PSEN1-213ENST00000555386 OR52I2Q8NH67 350 aa8.49□□□□□ -1.05
PSEN1-213ENST00000555386 TSEN15Q8WW01 171 aaKnown RBP8.49□□□□□ -1.05
PSEN1-213ENST00000555386 ORAI1Q96D31 301 aa8.49□□□□□ -1.05
PSEN1-213ENST00000555386 MED30Q96HR3 178 aa8.49□□□□□ -1.05
PSEN1-213ENST00000555386 AMELYQ99218 206 aa8.49□□□□□ -1.05
PSEN1-213ENST00000555386 CCL19Q99731 98 aa8.49□□□□□ -1.05
PSEN1-213ENST00000555386 ABHD6Q9BV23 337 aa8.49□□□□□ -1.05
PSEN1-213ENST00000555386 AUNIPQ9H7T9 357 aa8.49□□□□□ -1.05
PSEN1-213ENST00000555386 HRASLSQ9HDD0 168 aa8.49□□□□□ -1.05
PSEN1-213ENST00000555386 DIABLOQ9NR28 239 aa8.49□□□□□ -1.05
PSEN1-213ENST00000555386 CENPMQ9NSP4 180 aa8.49□□□□□ -1.05
PSEN1-213ENST00000555386 TAS2R8Q9NYW2 309 aa8.49□□□□□ -1.05
PSEN1-213ENST00000555386 CKLFQ9UBR5 152 aa8.49□□□□□ -1.05
PSEN1-213ENST00000555386 GDF2Q9UK05 429 aaPredicted RBP8.49□□□□□ -1.05
PSEN1-213ENST00000555386 R4GMQ9 66 aa8.49□□□□□ -1.05
PSEN1-213ENST00000555386 TEX15Q9BXT5 2789 aa8.48□□□□□ -1.05
PSEN1-213ENST00000555386 PDZD2O15018 2839 aa8.48□□□□□ -1.05
PSEN1-213ENST00000555386 MYO9AB2RTY4 2548 aa8.48□□□□□ -1.05
PSEN1-213ENST00000555386 F5H5K5 113 aa8.48□□□□□ -1.05
PSEN1-213ENST00000555386 SRSF10O75494 262 aaKnown RBP8.48□□□□□ -1.05
PSEN1-213ENST00000555386 SNAPC5O75971 98 aa8.48□□□□□ -1.05
PSEN1-213ENST00000555386 MT-ND4P03905 459 aa8.48□□□□□ -1.05
PSEN1-213ENST00000555386 MAS1P04201 325 aa8.48□□□□□ -1.05
PSEN1-213ENST00000555386 ZNF35P13682 527 aa8.48□□□□□ -1.05
PSEN1-213ENST00000555386 ACHEP22303 614 aa8.48□□□□□ -1.05
PSEN1-213ENST00000555386 DCTDP32321 178 aa8.48□□□□□ -1.05
PSEN1-213ENST00000555386 FAUP35544 74 aaKnown RBP8.48□□□□□ -1.05
PSEN1-213ENST00000555386 MAGEB1P43366 347 aa8.48□□□□□ -1.05
PSEN1-213ENST00000555386 MECP2P51608 486 aaKnown RBP8.48□□□□□ -1.05
PSEN1-213ENST00000555386 ERVS71-1P61550 626 aa8.48□□□□□ -1.05
PSEN1-213ENST00000555386 TAF13Q15543 124 aa8.48□□□□□ -1.05
PSEN1-213ENST00000555386 RAB11BQ15907 218 aa8.48□□□□□ -1.05
PSEN1-213ENST00000555386 LCE2DQ5TA82 110 aaPredicted RBP8.48□□□□□ -1.05
PSEN1-213ENST00000555386 METTL11BQ5VVY1 283 aa8.48□□□□□ -1.05
PSEN1-213ENST00000555386 GLT8D1Q68CQ7 371 aa8.48□□□□□ -1.05
PSEN1-213ENST00000555386 FAM166AQ6J272 317 aa8.48□□□□□ -1.05
PSEN1-213ENST00000555386 ZNF782Q6ZMW2 699 aaPredicted RBP8.48□□□□□ -1.05
PSEN1-213ENST00000555386 ZNF767PQ75MW2 155 aa8.48□□□□□ -1.05
PSEN1-213ENST00000555386 IZUMO1Q8IYV9 350 aa8.48□□□□□ -1.05
PSEN1-213ENST00000555386 FBXL14Q8N1E6 418 aa8.48□□□□□ -1.05
PSEN1-213ENST00000555386 OR1J2Q8NGS2 313 aa8.48□□□□□ -1.05
PSEN1-213ENST00000555386 OR1F12Q8NHA8 337 aa8.48□□□□□ -1.05
PSEN1-213ENST00000555386 C20orf85Q9H1P6 137 aa8.48□□□□□ -1.05
PSEN1-213ENST00000555386 CA10Q9NS85 328 aa8.48□□□□□ -1.05
PSEN1-213ENST00000555386 CYB5R1Q9UHQ9 305 aa8.48□□□□□ -1.05
PSEN1-213ENST00000555386 DHDHQ9UQ10 334 aa8.48□□□□□ -1.05
PSEN1-213ENST00000555386 SPEF1Q9Y4P9 236 aa8.48□□□□□ -1.05
PSEN1-213ENST00000555386 LRP12Q9Y561 859 aa8.48□□□□□ -1.05
PSEN1-213ENST00000555386 PRRC2AP48634 2157 aaKnown RBP8.47□□□□□ -1.05
PSEN1-213ENST00000555386 MEIKINA0A087WXM9 373 aa8.47□□□□□ -1.05
PSEN1-213ENST00000555386 A0A0A6YYH2 397 aa8.47□□□□□ -1.05
PSEN1-213ENST00000555386 LOC100289279A0A1B0GTE1 492 aa8.47□□□□□ -1.05
PSEN1-213ENST00000555386 A6NJ64 397 aa8.47□□□□□ -1.05
PSEN1-213ENST00000555386 SOD3P08294 240 aa8.47□□□□□ -1.05
PSEN1-213ENST00000555386 CSF1P09603 554 aa8.47□□□□□ -1.05
PSEN1-213ENST00000555386 OR4A8P0C604 315 aa8.47□□□□□ -1.05
PSEN1-213ENST00000555386 SULT1A3P0DMM9 295 aa8.47□□□□□ -1.05
PSEN1-213ENST00000555386 SULT1A4P0DMN0 295 aa8.47□□□□□ -1.05
PSEN1-213ENST00000555386 IGFBP3P17936 291 aaPredicted RBP8.47□□□□□ -1.05
PSEN1-213ENST00000555386 DNASE1P24855 282 aa8.47□□□□□ -1.05
PSEN1-213ENST00000555386 CCR6P51684 374 aa8.47□□□□□ -1.05
PSEN1-213ENST00000555386 CLDN12P56749 244 aa8.47□□□□□ -1.05
PSEN1-213ENST00000555386 RAB35Q15286 201 aa8.47□□□□□ -1.05
PSEN1-213ENST00000555386 ALKBH6Q3KRA9 238 aa8.47□□□□□ -1.05
PSEN1-213ENST00000555386 C3orf36Q3SXR2 165 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms