RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 OR13C9Q8NGT0 318 aa10.69□□□□□ -0.7
SYNE2-219ENST00000555323 OR10Z1Q8NGY1 313 aa10.69□□□□□ -0.7
SYNE2-219ENST00000555323 C10orf105Q8TEF2 133 aa10.69□□□□□ -0.7
SYNE2-219ENST00000555323 BORCS8Q96FH0 119 aa10.69□□□□□ -0.7
SYNE2-219ENST00000555323 PPIL3Q9H2H8 161 aaKnown RBP10.69□□□□□ -0.7
SYNE2-219ENST00000555323 TMEM138Q9NPI0 162 aa10.69□□□□□ -0.7
SYNE2-219ENST00000555323 TAS2R4Q9NYW5 299 aa10.69□□□□□ -0.7
SYNE2-219ENST00000555323 CACNG2Q9Y698 323 aa10.69□□□□□ -0.7
SYNE2-219ENST00000555323 CHD3Q12873 2000 aaKnown RBP10.68□□□□□ -0.7
SYNE2-219ENST00000555323 TRAV8-7A0A075B6U6 113 aa10.68□□□□□ -0.7
SYNE2-219ENST00000555323 IGHV3-64DA0A0J9YX35 117 aa10.68□□□□□ -0.7
SYNE2-219ENST00000555323 A0A1W2PPK0 400 aa10.68□□□□□ -0.7
SYNE2-219ENST00000555323 MEGF11A6BM72 1044 aa10.68□□□□□ -0.7
SYNE2-219ENST00000555323 NOS1APO75052 506 aaPredicted RBP10.68□□□□□ -0.7
SYNE2-219ENST00000555323 SRMP19623 302 aa10.68□□□□□ -0.7
SYNE2-219ENST00000555323 ALDH3B2P48448 385 aa10.68□□□□□ -0.7
SYNE2-219ENST00000555323 ATP1B3P54709 279 aa10.68□□□□□ -0.7
SYNE2-219ENST00000555323 MTCP1P56278 107 aa10.68□□□□□ -0.7
SYNE2-219ENST00000555323 PPP3R1P63098 170 aa10.68□□□□□ -0.7
SYNE2-219ENST00000555323 Q5PR19 223 aa10.68□□□□□ -0.7
SYNE2-219ENST00000555323 CLEC2AQ6UVW9 174 aa10.68□□□□□ -0.7
SYNE2-219ENST00000555323 WDR82Q6UXN9 313 aa10.68□□□□□ -0.7
SYNE2-219ENST00000555323 LYPD6Q86Y78 171 aa10.68□□□□□ -0.7
SYNE2-219ENST00000555323 OR51A2Q8NGJ7 313 aa10.68□□□□□ -0.7
SYNE2-219ENST00000555323 OR11L1Q8NGX0 322 aa10.68□□□□□ -0.7
SYNE2-219ENST00000555323 ZNF420Q8TAQ5 688 aaPredicted RBP10.68□□□□□ -0.7
SYNE2-219ENST00000555323 ZNF671Q8TAW3 534 aa10.68□□□□□ -0.7
SYNE2-219ENST00000555323 AQP3Q92482 292 aa10.68□□□□□ -0.7
SYNE2-219ENST00000555323 FAM168AQ92567 244 aa10.68□□□□□ -0.7
SYNE2-219ENST00000555323 RPL3LQ92901 407 aaKnown RBP10.68□□□□□ -0.7
SYNE2-219ENST00000555323 HPS1Q92902 700 aa10.68□□□□□ -0.7
SYNE2-219ENST00000555323 ORAI1Q96D31 301 aa10.68□□□□□ -0.7
SYNE2-219ENST00000555323 YIPF6Q96EC8 236 aa10.68□□□□□ -0.7
SYNE2-219ENST00000555323 PKIBQ9C010 78 aa10.68□□□□□ -0.7
SYNE2-219ENST00000555323 UFSP2Q9NUQ7 469 aa10.68□□□□□ -0.7
SYNE2-219ENST00000555323 C1orf123Q9NWV4 160 aa10.68□□□□□ -0.7
SYNE2-219ENST00000555323 RNF7Q9UBF6 113 aa10.68□□□□□ -0.7
SYNE2-219ENST00000555323 CKLFQ9UBR5 152 aa10.68□□□□□ -0.7
SYNE2-219ENST00000555323 NOTCH2Q04721 2471 aa10.68□□□□□ -0.7
SYNE2-219ENST00000555323 PRRC2AP48634 2157 aaKnown RBP10.67□□□□□ -0.7
SYNE2-219ENST00000555323 CSMD1Q96PZ7 3565 aa10.67□□□□□ -0.7
SYNE2-219ENST00000555323 FAM230AA0A1W2PPH8 454 aa10.67□□□□□ -0.7
SYNE2-219ENST00000555323 LRRC30A6NM36 301 aa10.67□□□□□ -0.7
SYNE2-219ENST00000555323 ARL6IP5O75915 188 aa10.67□□□□□ -0.7
SYNE2-219ENST00000555323 CD36P16671 472 aa10.67□□□□□ -0.7
SYNE2-219ENST00000555323 BDKRB2P30411 391 aa10.67□□□□□ -0.7
SYNE2-219ENST00000555323 HAAOP46952 286 aa10.67□□□□□ -0.7
SYNE2-219ENST00000555323 IL24Q13007 206 aa10.67□□□□□ -0.7
SYNE2-219ENST00000555323 KISS1Q15726 138 aa10.67□□□□□ -0.7
SYNE2-219ENST00000555323 HSD17B12Q53GQ0 312 aa10.67□□□□□ -0.7
SYNE2-219ENST00000555323 FAM27D1Q5T7N8 215 aa10.67□□□□□ -0.7
SYNE2-219ENST00000555323 HAGHLQ6PII5 290 aaPredicted RBP10.67□□□□□ -0.7
SYNE2-219ENST00000555323 GDPGP1Q6ZNW5 385 aa10.67□□□□□ -0.7
SYNE2-219ENST00000555323 ZNF826PQ6ZT77 177 aa10.67□□□□□ -0.7
SYNE2-219ENST00000555323 CALHM1Q8IU99 346 aa10.67□□□□□ -0.7
SYNE2-219ENST00000555323 C1orf87Q8N0U7 546 aa10.67□□□□□ -0.7
SYNE2-219ENST00000555323 GCSAMQ8N6F7 178 aa10.67□□□□□ -0.7
SYNE2-219ENST00000555323 OR52N4Q8NGI2 321 aa10.67□□□□□ -0.7
SYNE2-219ENST00000555323 OR13F1Q8NGS4 319 aa10.67□□□□□ -0.7
SYNE2-219ENST00000555323 TRMT10AQ8TBZ6 339 aaKnown RBP10.67□□□□□ -0.7
SYNE2-219ENST00000555323 DCAF16Q9NXF7 216 aa10.67□□□□□ -0.7
SYNE2-219ENST00000555323 TREM2Q9NZC2 230 aa10.67□□□□□ -0.7
SYNE2-219ENST00000555323 STUB1Q9UNE7 303 aa10.67□□□□□ -0.7
SYNE2-219ENST00000555323 NPTNQ9Y639 398 aa10.67□□□□□ -0.7
SYNE2-219ENST00000555323 TRAV1-2A0A0B4J238 106 aa10.66□□□□□ -0.7
SYNE2-219ENST00000555323 A6NLC8 198 aa10.66□□□□□ -0.7
SYNE2-219ENST00000555323 SRRM5B3KS81 715 aa10.66□□□□□ -0.7
SYNE2-219ENST00000555323 CLDN25C9JDP6 229 aa10.66□□□□□ -0.7
SYNE2-219ENST00000555323 J3QT63 122 aa10.66□□□□□ -0.7
SYNE2-219ENST00000555323 MAGEB3O15480 346 aa10.66□□□□□ -0.7
SYNE2-219ENST00000555323 RHBDL1O75783 438 aa10.66□□□□□ -0.7
SYNE2-219ENST00000555323 OCMP0CE72 109 aaPredicted RBP10.66□□□□□ -0.7
SYNE2-219ENST00000555323 IRF2P14316 349 aa10.66□□□□□ -0.7
SYNE2-219ENST00000555323 SLC25A16P16260 332 aa10.66□□□□□ -0.7
SYNE2-219ENST00000555323 NR4A2P43354 598 aa10.66□□□□□ -0.7
SYNE2-219ENST00000555323 ZP1P60852 638 aa10.66□□□□□ -0.7
SYNE2-219ENST00000555323 ASCL4Q6XD76 172 aa10.66□□□□□ -0.7
SYNE2-219ENST00000555323 RNF144BQ7Z419 303 aa10.66□□□□□ -0.7
SYNE2-219ENST00000555323 LRRTM1Q86UE6 522 aa10.66□□□□□ -0.7
SYNE2-219ENST00000555323 LRRC28Q86X40 367 aaPredicted RBP10.66□□□□□ -0.7
SYNE2-219ENST00000555323 ANGPTL5Q86XS5 388 aa10.66□□□□□ -0.7
SYNE2-219ENST00000555323 SAXO1Q8IYX7 474 aa10.66□□□□□ -0.7
SYNE2-219ENST00000555323 ZSCAN4Q8NAM6 433 aaPredicted RBP10.66□□□□□ -0.7
SYNE2-219ENST00000555323 NPRL2Q8WTW4 380 aa10.66□□□□□ -0.7
SYNE2-219ENST00000555323 RAB1CQ92928 201 aa10.66□□□□□ -0.7
SYNE2-219ENST00000555323 CPNE2Q96FN4 548 aaPredicted RBP10.66□□□□□ -0.7
SYNE2-219ENST00000555323 TCF7L1Q9HCS4 588 aa10.66□□□□□ -0.7
SYNE2-219ENST00000555323 SNTG1Q9NSN8 517 aa10.66□□□□□ -0.7
SYNE2-219ENST00000555323 TXNL4BQ9NX01 149 aaKnown RBP10.66□□□□□ -0.7
SYNE2-219ENST00000555323 SSR3Q9UNL2 185 aa10.66□□□□□ -0.7
SYNE2-219ENST00000555323 POLDIP2Q9Y2S7 368 aa10.66□□□□□ -0.7
SYNE2-219ENST00000555323 WIPI2Q9Y4P8 454 aa10.66□□□□□ -0.7
SYNE2-219ENST00000555323 DYSFO75923 2080 aa10.65□□□□□ -0.7
SYNE2-219ENST00000555323 ANKRD17O75179 2603 aaKnown RBP10.65□□□□□ -0.7
SYNE2-219ENST00000555323 PPIAL4EA0A075B759 164 aa10.65□□□□□ -0.7
SYNE2-219ENST00000555323 IGHV4-30-2A0A087WSY4 118 aa10.65□□□□□ -0.7
SYNE2-219ENST00000555323 PPIAL4DF5H284 164 aa10.65□□□□□ -0.7
SYNE2-219ENST00000555323 TNFRSF13BO14836 293 aaPredicted RBP10.65□□□□□ -0.7
SYNE2-219ENST00000555323 CYB5R3P00387 301 aaPredicted RBP10.65□□□□□ -0.7
SYNE2-219ENST00000555323 IGHV2-70P01814 119 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms