RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 CCL1P22362 96 aa9.65□□□□□ -0.86
SHMT2-216ENST00000554975 SFTPDP35247 375 aa9.65□□□□□ -0.86
SHMT2-216ENST00000554975 MAGEB1P43366 347 aa9.65□□□□□ -0.86
SHMT2-216ENST00000554975 LHX2P50458 406 aa9.65□□□□□ -0.86
SHMT2-216ENST00000554975 ATP5J2P56134 94 aa9.65□□□□□ -0.86
SHMT2-216ENST00000554975 CLDN18P56856 261 aa9.65□□□□□ -0.86
SHMT2-216ENST00000554975 B3GALT5-AS1P59052 145 aa9.65□□□□□ -0.86
SHMT2-216ENST00000554975 GNG2P59768 71 aa9.65□□□□□ -0.86
SHMT2-216ENST00000554975 GALK2Q01415 458 aa9.65□□□□□ -0.86
SHMT2-216ENST00000554975 MPPED2Q15777 294 aa9.65□□□□□ -0.86
SHMT2-216ENST00000554975 HIST3H3Q16695 136 aa9.65□□□□□ -0.86
SHMT2-216ENST00000554975 ACTBL2Q562R1 376 aa9.65□□□□□ -0.86
SHMT2-216ENST00000554975 GLYATL3Q5SZD4 288 aa9.65□□□□□ -0.86
SHMT2-216ENST00000554975 STEAP1BQ6NZ63 245 aa9.65□□□□□ -0.86
SHMT2-216ENST00000554975 LPCAT3Q6P1A2 487 aa9.65□□□□□ -0.86
SHMT2-216ENST00000554975 FOXL2NBQ6ZUU3 175 aa9.65□□□□□ -0.86
SHMT2-216ENST00000554975 GPAT4Q86UL3 456 aa9.65□□□□□ -0.86
SHMT2-216ENST00000554975 LSRQ86X29 649 aaPredicted RBP9.65□□□□□ -0.86
SHMT2-216ENST00000554975 ZNF584Q8IVC4 421 aa9.65□□□□□ -0.86
SHMT2-216ENST00000554975 PNLDC1Q8NA58 520 aaKnown RBP9.65□□□□□ -0.86
SHMT2-216ENST00000554975 PLPP7Q8NBV4 271 aa9.65□□□□□ -0.86
SHMT2-216ENST00000554975 SLC25A28Q96A46 364 aa9.65□□□□□ -0.86
SHMT2-216ENST00000554975 FOXN4Q96NZ1 517 aa9.65□□□□□ -0.86
SHMT2-216ENST00000554975 GINS4Q9BRT9 223 aa9.65□□□□□ -0.86
SHMT2-216ENST00000554975 C19orf24Q9BVV8 132 aa9.65□□□□□ -0.86
SHMT2-216ENST00000554975 SFXN3Q9BWM7 321 aa9.65□□□□□ -0.86
SHMT2-216ENST00000554975 TMPRSS13Q9BYE2 586 aa9.65□□□□□ -0.86
SHMT2-216ENST00000554975 NELFAQ9H3P2 528 aa9.65□□□□□ -0.86
SHMT2-216ENST00000554975 MGAT4CQ9UBM8 478 aa9.65□□□□□ -0.86
SHMT2-216ENST00000554975 GHRLQ9UBU3 117 aa9.65□□□□□ -0.86
SHMT2-216ENST00000554975 KLK11Q9UBX7 282 aa9.65□□□□□ -0.86
SHMT2-216ENST00000554975 CADP27708 2225 aa9.65□□□□□ -0.86
SHMT2-216ENST00000554975 A0A1W2PNR3 127 aa9.64□□□□□ -0.87
SHMT2-216ENST00000554975 LINC01387J3KSC0 135 aa9.64□□□□□ -0.87
SHMT2-216ENST00000554975 P2RY10O00398 339 aa9.64□□□□□ -0.87
SHMT2-216ENST00000554975 EIF1AYO14602 144 aaKnown RBP9.64□□□□□ -0.87
SHMT2-216ENST00000554975 CD5LO43866 347 aa9.64□□□□□ -0.87
SHMT2-216ENST00000554975 TNFSF13O75888 250 aa9.64□□□□□ -0.87
SHMT2-216ENST00000554975 RAB3DO95716 219 aa9.64□□□□□ -0.87
SHMT2-216ENST00000554975 PLAUP00749 431 aa9.64□□□□□ -0.87
SHMT2-216ENST00000554975 CHRM2P08172 466 aa9.64□□□□□ -0.87
SHMT2-216ENST00000554975 ZNF708P17019 499 aa9.64□□□□□ -0.87
SHMT2-216ENST00000554975 MPZP25189 248 aa9.64□□□□□ -0.87
SHMT2-216ENST00000554975 RAC1P63000 192 aa9.64□□□□□ -0.87
SHMT2-216ENST00000554975 DHODHQ02127 395 aa9.64□□□□□ -0.87
SHMT2-216ENST00000554975 CAMK2DQ13557 499 aa9.64□□□□□ -0.87
SHMT2-216ENST00000554975 CLEC12BQ2HXU8 276 aa9.64□□□□□ -0.87
SHMT2-216ENST00000554975 TMEM176BQ3YBM2 270 aaPredicted RBP9.64□□□□□ -0.87
SHMT2-216ENST00000554975 CHRFAM7AQ494W8 412 aa9.64□□□□□ -0.87
SHMT2-216ENST00000554975 PDSS1Q5T2R2 415 aa9.64□□□□□ -0.87
SHMT2-216ENST00000554975 SFRP4Q6FHJ7 346 aaPredicted RBP9.64□□□□□ -0.87
SHMT2-216ENST00000554975 NHLRC1Q6VVB1 395 aa9.64□□□□□ -0.87
SHMT2-216ENST00000554975 ZNF627Q7L945 461 aa9.64□□□□□ -0.87
SHMT2-216ENST00000554975 COMMD2Q86X83 199 aa9.64□□□□□ -0.87
SHMT2-216ENST00000554975 GABRG1Q8N1C3 465 aa9.64□□□□□ -0.87
SHMT2-216ENST00000554975 KDM8Q8N371 416 aa9.64□□□□□ -0.87
SHMT2-216ENST00000554975 ZNF283Q8N7M2 679 aa9.64□□□□□ -0.87
SHMT2-216ENST00000554975 GJC3Q8NFK1 279 aa9.64□□□□□ -0.87
SHMT2-216ENST00000554975 OR2T35Q8NGX2 323 aa9.64□□□□□ -0.87
SHMT2-216ENST00000554975 PRRT1Q99946 306 aa9.64□□□□□ -0.87
SHMT2-216ENST00000554975 REG4Q9BYZ8 158 aa9.64□□□□□ -0.87
SHMT2-216ENST00000554975 ALX4Q9H161 411 aaPredicted RBP9.64□□□□□ -0.87
SHMT2-216ENST00000554975 OR10A4Q9H209 315 aa9.64□□□□□ -0.87
SHMT2-216ENST00000554975 SEC61A2Q9H9S3 476 aa9.64□□□□□ -0.87
SHMT2-216ENST00000554975 PLSCR3Q9NRY6 295 aa9.64□□□□□ -0.87
SHMT2-216ENST00000554975 SLC2A8Q9NY64 477 aa9.64□□□□□ -0.87
SHMT2-216ENST00000554975 B3GNT2Q9NY97 397 aa9.64□□□□□ -0.87
SHMT2-216ENST00000554975 GLTPQ9NZD2 209 aa9.64□□□□□ -0.87
SHMT2-216ENST00000554975 ZNF69Q9UC07 566 aa9.64□□□□□ -0.87
SHMT2-216ENST00000554975 MGAT4AQ9UM21 535 aa9.64□□□□□ -0.87
SHMT2-216ENST00000554975 LHFPL6Q9Y693 200 aa9.64□□□□□ -0.87
SHMT2-216ENST00000554975 MEGF8Q7Z7M0 2845 aa9.63□□□□□ -0.87
SHMT2-216ENST00000554975 SLC22A20A6NK97 555 aa9.63□□□□□ -0.87
SHMT2-216ENST00000554975 DHRS7CA6NNS2 312 aa9.63□□□□□ -0.87
SHMT2-216ENST00000554975 ZNF736B4DX44 427 aaPredicted RBP9.63□□□□□ -0.87
SHMT2-216ENST00000554975 H0YC42 278 aa9.63□□□□□ -0.87
SHMT2-216ENST00000554975 M0R233 179 aa9.63□□□□□ -0.87
SHMT2-216ENST00000554975 DOK2O60496 412 aa9.63□□□□□ -0.87
SHMT2-216ENST00000554975 ALX3O95076 343 aa9.63□□□□□ -0.87
SHMT2-216ENST00000554975 MPZL1O95297 269 aa9.63□□□□□ -0.87
SHMT2-216ENST00000554975 CD74P04233 296 aa9.63□□□□□ -0.87
SHMT2-216ENST00000554975 GSTP1P09211 210 aaKnown RBP9.63□□□□□ -0.87
SHMT2-216ENST00000554975 THBS4P35443 961 aa9.63□□□□□ -0.87
SHMT2-216ENST00000554975 CBX5P45973 191 aa9.63□□□□□ -0.87
SHMT2-216ENST00000554975 EIF1AXP47813 144 aaKnown RBP9.63□□□□□ -0.87
SHMT2-216ENST00000554975 CX3CR1P49238 355 aa9.63□□□□□ -0.87
SHMT2-216ENST00000554975 CLDN17P56750 224 aa9.63□□□□□ -0.87
SHMT2-216ENST00000554975 GMFBP60983 142 aa9.63□□□□□ -0.87
SHMT2-216ENST00000554975 SPOCK1Q08629 439 aa9.63□□□□□ -0.87
SHMT2-216ENST00000554975 ECH1Q13011 328 aa9.63□□□□□ -0.87
SHMT2-216ENST00000554975 IKZF1Q13422 519 aa9.63□□□□□ -0.87
SHMT2-216ENST00000554975 RNASE10Q5GAN6 216 aaKnown RBP9.63□□□□□ -0.87
SHMT2-216ENST00000554975 ASPHD2Q6ICH7 369 aa9.63□□□□□ -0.87
SHMT2-216ENST00000554975 ZNF529Q6P280 563 aa9.63□□□□□ -0.87
SHMT2-216ENST00000554975 ZNF474Q6S9Z5 364 aaPredicted RBP9.63□□□□□ -0.87
SHMT2-216ENST00000554975 PP6455Q8WZ26 134 aa9.63□□□□□ -0.87
SHMT2-216ENST00000554975 GCDHQ92947 438 aaPredicted RBP9.63□□□□□ -0.87
SHMT2-216ENST00000554975 WNT2BQ93097 391 aa9.63□□□□□ -0.87
SHMT2-216ENST00000554975 TMEM54Q969K7 222 aa9.63□□□□□ -0.87
SHMT2-216ENST00000554975 URM1Q9BTM9 101 aaKnown RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms