RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 KCNIP1Q9NZI2 227 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 TAC3Q9UHF0 121 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 PCYOX1Q9UHG3 505 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 NXT1Q9UKK6 140 aaKnown RBP1.01□□□□□ -2.25
PRPF39-208ENST00000554785 KIAA1257Q9ULG3 409 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 COQ4Q9Y3A0 265 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 TET2Q6N021 2002 aaPredicted RBP1.01□□□□□ -2.25
PRPF39-208ENST00000554785 FAM240BA0A1B0GVZ2 78 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 A0A1W2PQ67 120 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 CCDC182A6NF36 153 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 MGAT4DA6NG13 374 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 OR5B21A6NL26 309 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 H0YGG7 62 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 OR1I1O60431 355 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 INSP01308 110 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 IFNA16P05015 189 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 GIPP09681 153 aaPredicted RBP1.01□□□□□ -2.25
PRPF39-208ENST00000554785 CHTF8P0CG12 524 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 RBMY1A1P0DJD3 496 aaKnown RBP1.01□□□□□ -2.25
PRPF39-208ENST00000554785 ICAM2P13598 275 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 MGMTP16455 207 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 ZNF17P17021 662 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 MDKP21741 143 aaPredicted RBP1.01□□□□□ -2.25
PRPF39-208ENST00000554785 CD9P21926 228 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 CMA1P23946 247 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 MIPP30301 263 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 FMO3P31513 532 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 COILP38432 576 aaPredicted RBP1.01□□□□□ -2.25
PRPF39-208ENST00000554785 ZNF133P52736 654 aaPredicted RBP1.01□□□□□ -2.25
PRPF39-208ENST00000554785 CDH6P55285 790 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 OR4D2P58180 307 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 SEC61GP60059 68 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 RAB8AP61006 207 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 SNRPFP62306 86 aaKnown RBP1.01□□□□□ -2.25
PRPF39-208ENST00000554785 GBE1Q04446 702 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 SCRN3Q0VDG4 424 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 GNMTQ14749 295 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 MPPED2Q15777 294 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 EXOC3L4Q17RC7 722 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 MAJINQ3KP22 176 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 PHYHD1Q5SRE7 291 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 GPR157Q5UAW9 335 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 OR2A2Q6IF42 318 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 C1orf94Q6P1W5 598 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 UQCC3Q6UW78 93 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 ENPP6Q6UWR7 440 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 ZNF620Q6ZNG0 422 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 TGIF2LXQ8IUE1 241 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 NUDCD3Q8IVD9 361 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 KRT222Q8N1A0 295 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 ZCCHC24Q8N2G6 241 aaKnown RBP1.01□□□□□ -2.25
PRPF39-208ENST00000554785 FAM71E2Q8N5Q1 922 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 ACOT4Q8N9L9 421 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 ZFP62Q8NB50 900 aaPredicted RBP1.01□□□□□ -2.25
PRPF39-208ENST00000554785 OR4K2Q8NGD2 314 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 OR5M1Q8NGP8 315 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 FAM110BQ8TC76 370 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 FANK1Q8TC84 345 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 LKAAEAR1Q8TD35 194 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 PYROXD1Q8WU10 500 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 KCTD4Q8WVF5 259 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 NELFBQ8WX92 580 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 RDH5Q92781 318 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 RERGQ96A58 199 aaPredicted RBP1.01□□□□□ -2.25
PRPF39-208ENST00000554785 ZMYND19Q96E35 227 aaPredicted RBP1.01□□□□□ -2.25
PRPF39-208ENST00000554785 DCUN1D1Q96GG9 259 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 FCRL1Q96LA6 429 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 CSPG4P5Q96PW8 444 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 CYTH2Q99418 400 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 FMO2Q99518 471 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 DOHHQ9BU89 302 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 C1QTNF6Q9BXI9 259 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 OR8D2Q9GZM6 311 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 GBA3Q9H227 469 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 OR52A5Q9H2C5 316 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 PPA2Q9H2U2 334 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 NIPAL2Q9H841 368 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 NMRAL1Q9HBL8 299 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 GLRX2Q9NS18 164 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 QPCTLQ9NXS2 382 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 PDP1Q9P0J1 537 aaPredicted RBP1.01□□□□□ -2.25
PRPF39-208ENST00000554785 KCNIP3Q9Y2W7 256 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 N6AMT1Q9Y5N5 214 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 NPTNQ9Y639 398 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 CACNG2Q9Y698 323 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 MUC4Q99102 2169 aa1.01□□□□□ -2.25
PRPF39-208ENST00000554785 RYR2Q92736 4967 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 A0A0G2JLM5 398 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 CTAGE15A4D2H0 777 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 BTBD17A6NE02 478 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 GOLGA8KD6RF30 607 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 F8VZ95 297 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 LYNX1G3V0Z9 82 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 GOLGA8TH3BQL2 631 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 FOXE1O00358 373 aaPredicted RBP1□□□□□ -2.25
PRPF39-208ENST00000554785 BCKDKO14874 412 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 TRAF3IP2O43734 574 aaPredicted RBP1□□□□□ -2.25
PRPF39-208ENST00000554785 TNFSF13O75888 250 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 SRP72O76094 671 aaKnown RBP1□□□□□ -2.25
PRPF39-208ENST00000554785 TGM6O95932 706 aa1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms