RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 OR4F15Q8NGB8 312 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 OR4D6Q8NGJ1 314 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 OR10R2Q8NGX6 335 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 MCFD2Q8NI22 146 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 SPPL2BQ8TCT7 592 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 CD200R1Q8TD46 325 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 LCN9Q8WX39 176 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 C5orf30Q96GV9 206 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 SFRP2Q96HF1 295 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 TMEM56Q96MV1 263 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 ERGIC2Q96RQ1 377 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 ZNF382Q96SR6 550 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 PSMB7Q99436 277 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 IL12RB2Q99665 862 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 HOPXQ9BPY8 73 aaPredicted RBP3.75□□□□□ -1.81
ATXN3-225ENST00000554214 ALKBH7Q9BT30 221 aaPredicted RBP3.75□□□□□ -1.81
ATXN3-225ENST00000554214 DPH7Q9BTV6 452 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 WRAP53Q9BUR4 548 aaKnown RBP3.75□□□□□ -1.81
ATXN3-225ENST00000554214 CACNG6Q9BXT2 260 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 REG4Q9BYZ8 158 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 PARLQ9H300 379 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 DPEP2Q9H4A9 486 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 TUBB1Q9H4B7 451 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 FAM124BQ9H5Z6 455 aaPredicted RBP3.75□□□□□ -1.81
ATXN3-225ENST00000554214 TMEM185BQ9H7F4 350 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 RPF1Q9H9Y2 349 aaKnown RBP3.75□□□□□ -1.81
ATXN3-225ENST00000554214 FN3KRPQ9HA64 309 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 SPANXA1Q9NS26 97 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 CUTCQ9NTM9 273 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 PRR34Q9NV39 138 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 GPR83Q9NYM4 423 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 RIMS3Q9UJD0 308 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 ZNF223Q9UK11 482 aaPredicted RBP3.75□□□□□ -1.81
ATXN3-225ENST00000554214 PITPNC1Q9UKF7 332 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 FBXW2Q9UKT8 454 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 IKZF3Q9UKT9 509 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 UBQLN1Q9UMX0 589 aaKnown RBP3.75□□□□□ -1.81
ATXN3-225ENST00000554214 ZFP30Q9Y2G7 519 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 ZNF337Q9Y3M9 751 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 RHBDD3Q9Y3P4 386 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 ALG6Q9Y672 507 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 TMEM56-RWDD3S4R434 201 aa3.75□□□□□ -1.81
ATXN3-225ENST00000554214 ZFC3H1O60293 1989 aaKnown RBP3.74□□□□□ -1.81
ATXN3-225ENST00000554214 AGRNO00468 2067 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 TRBV2A0A0J9YWF9 115 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 TRBV11-1A0A0K0K1C0 115 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 GLYATL1P3A0A0U1RQE8 302 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 A0A1B0GVI7 797 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 ATP6AP2A0A1C7CYW4 349 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 A0A1W2PNU3 283 aaPredicted RBP3.74□□□□□ -1.81
ATXN3-225ENST00000554214 TRAPPC13A5PLN9 417 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 BTNL10A8MVZ5 291 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 A8MWP6 167 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 SRRM5B3KS81 715 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 ANKRD63C9JTQ0 380 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 G3V2L1 256 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 TMX2-CTNND1H3BSU7 103 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 M0R233 179 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 CLDN5O00501 218 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 MYL12BO14950 172 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 ZNF208O43345 1280 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 ORC5O43913 435 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 KIAA0513O60268 411 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 OR4F21O95013 312 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 TNFSF15O95150 251 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 PDYNP01213 254 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 CRYBA1P05813 215 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 HTR1AP08908 422 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 CPN1P15169 458 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 HLA-GP17693 338 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 MYL12AP19105 171 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 MYL9P24844 172 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 IVDP26440 423 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 SFTPDP35247 375 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 AKR1C3P42330 323 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 MAP2K4P45985 399 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 NUMBP49757 651 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 RGS4P49798 205 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 RPL14P50914 215 aaKnown RBP3.74□□□□□ -1.81
ATXN3-225ENST00000554214 TDGF1P3P51864 188 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 NDUFA8P51970 172 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 DEFA5Q01523 94 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 EMX1Q04741 257 aaPredicted RBP3.74□□□□□ -1.81
ATXN3-225ENST00000554214 ZFP36L1Q07352 338 aaKnown RBP3.74□□□□□ -1.81
ATXN3-225ENST00000554214 RBBP4Q09028 425 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 SLAMF1Q13291 335 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 FASTKQ14296 549 aaKnown RBP3.74□□□□□ -1.81
ATXN3-225ENST00000554214 SLC10A1Q14973 349 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 NRF1Q16656 503 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 NDUFA9Q16795 377 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 ISXQ2M1V0 245 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 TMEM249Q2WGJ8 235 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 C18orf21Q32NC0 220 aaPredicted RBP3.74□□□□□ -1.81
ATXN3-225ENST00000554214 MS4A18Q3C1V0 323 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 LINC00303Q3SY05 128 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 ZNF404Q494X3 552 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 HIGD2BQ4VC39 106 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 C5orf47Q569G3 176 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 PIGGQ5H8A4 983 aa3.74□□□□□ -1.81
ATXN3-225ENST00000554214 AKR1C8PQ5T2L2 129 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms