RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 TGFBR1P36897 503 aa12.34□□□□□ -0.43
SHMT2-210ENST00000553950 RPS19P39019 145 aaKnown RBP12.34□□□□□ -0.43
SHMT2-210ENST00000553950 BMXP51813 675 aa12.34□□□□□ -0.43
SHMT2-210ENST00000553950 TNFAIP6P98066 277 aaPredicted RBP12.34□□□□□ -0.43
SHMT2-210ENST00000553950 GPR176Q14439 515 aa12.34□□□□□ -0.43
SHMT2-210ENST00000553950 C1orf100Q5SVJ3 147 aa12.34□□□□□ -0.43
SHMT2-210ENST00000553950 Q6ZR03 302 aa12.34□□□□□ -0.43
SHMT2-210ENST00000553950 MKXQ8IYA7 352 aa12.34□□□□□ -0.43
SHMT2-210ENST00000553950 Q8IYB0 196 aa12.34□□□□□ -0.43
SHMT2-210ENST00000553950 HPS1Q92902 700 aa12.34□□□□□ -0.43
SHMT2-210ENST00000553950 TRAF4Q9BUZ4 470 aaPredicted RBP12.34□□□□□ -0.43
SHMT2-210ENST00000553950 RAB1BQ9H0U4 201 aa12.34□□□□□ -0.43
SHMT2-210ENST00000553950 FN3KRPQ9HA64 309 aa12.34□□□□□ -0.43
SHMT2-210ENST00000553950 ABRACLQ9P1F3 81 aa12.34□□□□□ -0.43
SHMT2-210ENST00000553950 ETV7Q9Y603 341 aa12.34□□□□□ -0.43
SHMT2-210ENST00000553950 A3GALT2U3KPV4 340 aa12.34□□□□□ -0.43
SHMT2-210ENST00000553950 CHD3Q12873 2000 aaKnown RBP12.33□□□□□ -0.43
SHMT2-210ENST00000553950 A0A0G2JK05 382 aa12.33□□□□□ -0.44
SHMT2-210ENST00000553950 TPD52L2O43399 206 aaKnown RBP12.33□□□□□ -0.44
SHMT2-210ENST00000553950 SPRY3O43610 288 aa12.33□□□□□ -0.44
SHMT2-210ENST00000553950 BPNT1O95861 308 aa12.33□□□□□ -0.44
SHMT2-210ENST00000553950 DANCRP0C864 163 aa12.33□□□□□ -0.44
SHMT2-210ENST00000553950 CALCBP10092 127 aa12.33□□□□□ -0.44
SHMT2-210ENST00000553950 MPZP25189 248 aa12.33□□□□□ -0.44
SHMT2-210ENST00000553950 GATA4P43694 442 aa12.33□□□□□ -0.44
SHMT2-210ENST00000553950 HAAOP46952 286 aa12.33□□□□□ -0.44
SHMT2-210ENST00000553950 OR10A3P58181 314 aa12.33□□□□□ -0.44
SHMT2-210ENST00000553950 IL24Q13007 206 aa12.33□□□□□ -0.44
SHMT2-210ENST00000553950 FAM76BQ5HYJ3 339 aa12.33□□□□□ -0.44
SHMT2-210ENST00000553950 AWAT2Q6E213 333 aa12.33□□□□□ -0.44
SHMT2-210ENST00000553950 C11orf71Q6IPW1 123 aa12.33□□□□□ -0.44
SHMT2-210ENST00000553950 PXT1Q8NFP0 134 aa12.33□□□□□ -0.44
SHMT2-210ENST00000553950 ZNF671Q8TAW3 534 aa12.33□□□□□ -0.44
SHMT2-210ENST00000553950 TBC1D15Q8TC07 691 aa12.33□□□□□ -0.44
SHMT2-210ENST00000553950 TNFAIP8L1Q8WVP5 186 aa12.33□□□□□ -0.44
SHMT2-210ENST00000553950 DVL3Q92997 716 aaPredicted RBP12.33□□□□□ -0.44
SHMT2-210ENST00000553950 MEGF10Q96KG7 1140 aa12.33□□□□□ -0.44
SHMT2-210ENST00000553950 OR2V2Q96R30 315 aa12.33□□□□□ -0.44
SHMT2-210ENST00000553950 DCUN1D5Q9BTE7 237 aa12.33□□□□□ -0.44
SHMT2-210ENST00000553950 CST11Q9H112 138 aa12.33□□□□□ -0.44
SHMT2-210ENST00000553950 TLNRD1Q9H1K6 362 aa12.33□□□□□ -0.44
SHMT2-210ENST00000553950 SAP30LQ9HAJ7 183 aa12.33□□□□□ -0.44
SHMT2-210ENST00000553950 DECR2Q9NUI1 292 aa12.33□□□□□ -0.44
SHMT2-210ENST00000553950 DAPK2Q9UIK4 370 aa12.33□□□□□ -0.44
SHMT2-210ENST00000553950 MRPS28Q9Y2Q9 187 aaKnown RBP12.33□□□□□ -0.44
SHMT2-210ENST00000553950 HELZ2Q9BYK8 2649 aaKnown RBP12.33□□□□□ -0.44
SHMT2-210ENST00000553950 A6NLC8 198 aa12.32□□□□□ -0.44
SHMT2-210ENST00000553950 F5H5P2 479 aa12.32□□□□□ -0.44
SHMT2-210ENST00000553950 H7C417 338 aa12.32□□□□□ -0.44
SHMT2-210ENST00000553950 NAT2P11245 290 aa12.32□□□□□ -0.44
SHMT2-210ENST00000553950 THBS2P35442 1172 aa12.32□□□□□ -0.44
SHMT2-210ENST00000553950 PTGFRP43088 359 aa12.32□□□□□ -0.44
SHMT2-210ENST00000553950 POU3F4P49335 361 aa12.32□□□□□ -0.44
SHMT2-210ENST00000553950 ZNF154Q13106 437 aa12.32□□□□□ -0.44
SHMT2-210ENST00000553950 CNPY1Q3B7I2 92 aa12.32□□□□□ -0.44
SHMT2-210ENST00000553950 ZNF404Q494X3 552 aa12.32□□□□□ -0.44
SHMT2-210ENST00000553950 IDNKQ5T6J7 187 aa12.32□□□□□ -0.44
SHMT2-210ENST00000553950 LYPD6Q86Y78 171 aa12.32□□□□□ -0.44
SHMT2-210ENST00000553950 OR11L1Q8NGX0 322 aa12.32□□□□□ -0.44
SHMT2-210ENST00000553950 OR51I2Q9H344 312 aa12.32□□□□□ -0.44
SHMT2-210ENST00000553950 CXorf56Q9H5V9 222 aa12.32□□□□□ -0.44
SHMT2-210ENST00000553950 CNTD2Q9H8S5 307 aa12.32□□□□□ -0.44
SHMT2-210ENST00000553950 LIN7BQ9HAP6 207 aa12.32□□□□□ -0.44
SHMT2-210ENST00000553950 SMURF1Q9HCE7 757 aa12.32□□□□□ -0.44
SHMT2-210ENST00000553950 IL36GQ9NZH8 169 aa12.32□□□□□ -0.44
SHMT2-210ENST00000553950 ADAM30Q9UKF2 790 aa12.32□□□□□ -0.44
SHMT2-210ENST00000553950 CACNA1DQ01668 2161 aa12.32□□□□□ -0.44
SHMT2-210ENST00000553950 LOC100289279A0A1B0GTE1 492 aa12.31□□□□□ -0.44
SHMT2-210ENST00000553950 LRRC30A6NM36 301 aa12.31□□□□□ -0.44
SHMT2-210ENST00000553950 NCR1O76036 304 aa12.31□□□□□ -0.44
SHMT2-210ENST00000553950 SCGNO76038 276 aa12.31□□□□□ -0.44
SHMT2-210ENST00000553950 CLEC2LP0C7M8 214 aa12.31□□□□□ -0.44
SHMT2-210ENST00000553950 TMEM225BP0DP42 221 aa12.31□□□□□ -0.44
SHMT2-210ENST00000553950 IRF2P14316 349 aa12.31□□□□□ -0.44
SHMT2-210ENST00000553950 ARSBP15848 533 aa12.31□□□□□ -0.44
SHMT2-210ENST00000553950 OR3A4PP47883 348 aa12.31□□□□□ -0.44
SHMT2-210ENST00000553950 ZP1P60852 638 aa12.31□□□□□ -0.44
SHMT2-210ENST00000553950 PDZK1IP1Q13113 114 aa12.31□□□□□ -0.44
SHMT2-210ENST00000553950 MST1LQ2TV78 715 aa12.31□□□□□ -0.44
SHMT2-210ENST00000553950 HES5Q5TA89 166 aa12.31□□□□□ -0.44
SHMT2-210ENST00000553950 FAM166AQ6J272 317 aa12.31□□□□□ -0.44
SHMT2-210ENST00000553950 HAGHLQ6PII5 290 aaPredicted RBP12.31□□□□□ -0.44
SHMT2-210ENST00000553950 FIP1L1Q6UN15 594 aaKnown RBP12.31□□□□□ -0.44
SHMT2-210ENST00000553950 OR2W3Q7Z3T1 314 aa12.31□□□□□ -0.44
SHMT2-210ENST00000553950 C1orf87Q8N0U7 546 aa12.31□□□□□ -0.44
SHMT2-210ENST00000553950 OR10Z1Q8NGY1 313 aa12.31□□□□□ -0.44
SHMT2-210ENST00000553950 MCFD2Q8NI22 146 aa12.31□□□□□ -0.44
SHMT2-210ENST00000553950 NEU4Q8WWR8 484 aaPredicted RBP12.31□□□□□ -0.44
SHMT2-210ENST00000553950 MRPS24Q96EL2 167 aaKnown RBP12.31□□□□□ -0.44
SHMT2-210ENST00000553950 SPACA5Q96QH8 159 aa12.31□□□□□ -0.44
SHMT2-210ENST00000553950 GFI1Q99684 422 aa12.31□□□□□ -0.44
SHMT2-210ENST00000553950 CCL19Q99731 98 aa12.31□□□□□ -0.44
SHMT2-210ENST00000553950 METTL9Q9H1A3 318 aa12.31□□□□□ -0.44
SHMT2-210ENST00000553950 PLEKHF2Q9H8W4 249 aa12.31□□□□□ -0.44
SHMT2-210ENST00000553950 FBLN5Q9UBX5 448 aa12.31□□□□□ -0.44
SHMT2-210ENST00000553950 USP9YO00507 2555 aaPredicted RBP12.3□□□□□ -0.44
SHMT2-210ENST00000553950 A0A075B6Q4 140 aa12.3□□□□□ -0.44
SHMT2-210ENST00000553950 IGKV1-27A0A075B6S5 117 aa12.3□□□□□ -0.44
SHMT2-210ENST00000553950 A0A1W2PPR1 153 aa12.3□□□□□ -0.44
SHMT2-210ENST00000553950 SMIM30A4D0T7 59 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms