RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 OR51T1Q8NGJ9 327 aa11.01□□□□□ -0.65
VIPAS39-206ENST00000553888 C3orf80F5H4A9 247 aa11.01□□□□□ -0.65
VIPAS39-206ENST00000553888 DHFRP00374 187 aa11.01□□□□□ -0.65
VIPAS39-206ENST00000553888 CSF1P09603 554 aa11.01□□□□□ -0.65
VIPAS39-206ENST00000553888 GUSBP1Q15486 140 aa11.01□□□□□ -0.65
VIPAS39-206ENST00000553888 OR8B8Q15620 311 aa11.01□□□□□ -0.65
VIPAS39-206ENST00000553888 NKPD1Q17RQ9 610 aa11.01□□□□□ -0.65
VIPAS39-206ENST00000553888 PLCXD3Q63HM9 321 aa11.01□□□□□ -0.65
VIPAS39-206ENST00000553888 STEAP1BQ6NZ63 245 aa11.01□□□□□ -0.65
VIPAS39-206ENST00000553888 OR11H7Q8NGC8 314 aa11.01□□□□□ -0.65
VIPAS39-206ENST00000553888 KCNG3Q8TAE7 436 aa11.01□□□□□ -0.65
VIPAS39-206ENST00000553888 EXTL1Q92935 676 aa11.01□□□□□ -0.65
VIPAS39-206ENST00000553888 ABHD17AQ96GS6 310 aa11.01□□□□□ -0.65
VIPAS39-206ENST00000553888 FGF23Q9GZV9 251 aaPredicted RBP11.01□□□□□ -0.65
VIPAS39-206ENST00000553888 ZNF71Q9NQZ8 489 aaPredicted RBP11.01□□□□□ -0.65
VIPAS39-206ENST00000553888 WASF3Q9UPY6 502 aa11.01□□□□□ -0.65
VIPAS39-206ENST00000553888 PCNX1Q96RV3 2341 aa11□□□□□ -0.65
VIPAS39-206ENST00000553888 PYCARD-AS1I3L0S3 204 aa11□□□□□ -0.65
VIPAS39-206ENST00000553888 CRYZL1O95825 349 aa11□□□□□ -0.65
VIPAS39-206ENST00000553888 CXCL3P19876 107 aa11□□□□□ -0.65
VIPAS39-206ENST00000553888 KCNJ8Q15842 424 aa11□□□□□ -0.65
VIPAS39-206ENST00000553888 AKAP1Q92667 903 aaKnown RBP eCLIP11□□□□□ -0.65
VIPAS39-206ENST00000553888 CCDC120Q96HB5 630 aa11□□□□□ -0.65
VIPAS39-206ENST00000553888 ZNF75AQ96N20 296 aa11□□□□□ -0.65
VIPAS39-206ENST00000553888 BOLA1Q9Y3E2 137 aa11□□□□□ -0.65
VIPAS39-206ENST00000553888 IGKV1-12A0A0C4DH73 117 aa11□□□□□ -0.65
VIPAS39-206ENST00000553888 XRCC2O43543 280 aa11□□□□□ -0.65
VIPAS39-206ENST00000553888 AGFG2O95081 481 aa11□□□□□ -0.65
VIPAS39-206ENST00000553888 IGKV1D-12P01611 117 aa11□□□□□ -0.65
VIPAS39-206ENST00000553888 AKAIN1P0CW23 69 aa11□□□□□ -0.65
VIPAS39-206ENST00000553888 ARR3P36575 388 aa11□□□□□ -0.65
VIPAS39-206ENST00000553888 PDCD1Q15116 288 aa11□□□□□ -0.65
VIPAS39-206ENST00000553888 TMEM42Q69YG0 159 aa11□□□□□ -0.65
VIPAS39-206ENST00000553888 LIN54Q6MZP7 749 aa11□□□□□ -0.65
VIPAS39-206ENST00000553888 OR2W3Q7Z3T1 314 aa11□□□□□ -0.65
VIPAS39-206ENST00000553888 CD163Q86VB7 1156 aa11□□□□□ -0.65
VIPAS39-206ENST00000553888 OR52B4Q8NGK2 314 aa11□□□□□ -0.65
VIPAS39-206ENST00000553888 MAFIPQ8WZ33 124 aa11□□□□□ -0.65
VIPAS39-206ENST00000553888 SPSB4Q96A44 273 aa11□□□□□ -0.65
VIPAS39-206ENST00000553888 RAB3CQ96E17 227 aa11□□□□□ -0.65
VIPAS39-206ENST00000553888 GINS4Q9BRT9 223 aa11□□□□□ -0.65
VIPAS39-206ENST00000553888 OPN3Q9H1Y3 402 aaPredicted RBP11□□□□□ -0.65
VIPAS39-206ENST00000553888 FBLN5Q9UBX5 448 aa11□□□□□ -0.65
VIPAS39-206ENST00000553888 TP53TG5Q9Y2B4 290 aa11□□□□□ -0.65
VIPAS39-206ENST00000553888 TOXO94900 526 aa10.99□□□□□ -0.65
VIPAS39-206ENST00000553888 GABRR1P24046 479 aa10.99□□□□□ -0.65
VIPAS39-206ENST00000553888 HOXC12P31275 282 aa10.99□□□□□ -0.65
VIPAS39-206ENST00000553888 IDH3GP51553 393 aaPredicted RBP10.99□□□□□ -0.65
VIPAS39-206ENST00000553888 RPS27AP62979 156 aaKnown RBP10.99□□□□□ -0.65
VIPAS39-206ENST00000553888 RPP30P78346 268 aaKnown RBP10.99□□□□□ -0.65
VIPAS39-206ENST00000553888 PLP2Q04941 152 aa10.99□□□□□ -0.65
VIPAS39-206ENST00000553888 CALHM1Q8IU99 346 aa10.99□□□□□ -0.65
VIPAS39-206ENST00000553888 BORCS8Q96FH0 119 aa10.99□□□□□ -0.65
VIPAS39-206ENST00000553888 PAPOLGQ9BWT3 736 aaKnown RBP10.99□□□□□ -0.65
VIPAS39-206ENST00000553888 OR51J1Q9H342 316 aa10.99□□□□□ -0.65
VIPAS39-206ENST00000553888 COPZ2Q9P299 210 aa10.99□□□□□ -0.65
VIPAS39-206ENST00000553888 RELNP78509 3460 aa10.99□□□□□ -0.65
VIPAS39-206ENST00000553888 SMG1Q96Q15 3661 aaKnown RBP10.99□□□□□ -0.65
VIPAS39-206ENST00000553888 A0A0A6YYH2 397 aa10.99□□□□□ -0.65
VIPAS39-206ENST00000553888 C7orf66A4D0T2 115 aa10.99□□□□□ -0.65
VIPAS39-206ENST00000553888 NAP1L6A6NFF2 107 aa10.99□□□□□ -0.65
VIPAS39-206ENST00000553888 A6NJ64 397 aa10.99□□□□□ -0.65
VIPAS39-206ENST00000553888 HTR3BO95264 441 aa10.99□□□□□ -0.65
VIPAS39-206ENST00000553888 RAB3DO95716 219 aa10.99□□□□□ -0.65
VIPAS39-206ENST00000553888 ERVS71-1P61550 626 aa10.99□□□□□ -0.65
VIPAS39-206ENST00000553888 RTL6Q6ICC9 239 aa10.99□□□□□ -0.65
VIPAS39-206ENST00000553888 RAB12Q6IQ22 244 aa10.99□□□□□ -0.65
VIPAS39-206ENST00000553888 CDH26Q8IXH8 852 aa10.99□□□□□ -0.65
VIPAS39-206ENST00000553888 SLC30A7Q8NEW0 376 aa10.99□□□□□ -0.65
VIPAS39-206ENST00000553888 C10orf35Q96D05 121 aa10.99□□□□□ -0.65
VIPAS39-206ENST00000553888 S100A13Q99584 98 aa10.99□□□□□ -0.65
VIPAS39-206ENST00000553888 REPIN1Q9BWE0 567 aaKnown RBP10.99□□□□□ -0.65
VIPAS39-206ENST00000553888 CHST6Q9GZX3 395 aa10.99□□□□□ -0.65
VIPAS39-206ENST00000553888 NDUFB6O95139 128 aa10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 CYB5AP00167 134 aa10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 AMY2AP04746 511 aa10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 VSIG10L2P0DP72 767 aa10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 APLNRP35414 380 aa10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 ACTBP60709 375 aa10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 ACTG1P63261 375 aa10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 ZFP69Q49AA0 526 aa10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 AARDQ4LEZ3 155 aa10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 BRICD5Q6PL45 260 aa10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 C1orf122Q6ZSJ8 110 aa10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 MRPL21Q7Z2W9 205 aaKnown RBP10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 SLC6A7Q99884 636 aa10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 MED28Q9H204 178 aa10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 RGCCQ9H4X1 137 aa10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 GP6Q9HCN6 339 aa10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 ZNF230Q9UIE0 474 aaPredicted RBP10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 ZNF816-ZNF321PA0A0X1KG74 233 aa10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 DHRS7CA6NNS2 312 aa10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 TNFSF13O75888 250 aa10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 ALX3O95076 343 aa10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 RLN1P04808 185 aa10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 TRAPPC2P0DI81 140 aa10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 TRAPPC2BP0DI82 140 aa10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 HIST1H1DP16402 221 aaKnown RBP10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 BLVRBP30043 206 aaPredicted RBP10.98□□□□□ -0.65
VIPAS39-206ENST00000553888 RBP2P50120 134 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms