RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 GATBO75879 557 aaKnown RBP7□□□□□ -1.29
PSEN1-209ENST00000553855 FSTL3O95633 263 aa7□□□□□ -1.29
PSEN1-209ENST00000553855 NRASP01111 189 aa7□□□□□ -1.29
PSEN1-209ENST00000553855 TTRP02766 147 aa7□□□□□ -1.29
PSEN1-209ENST00000553855 ZNF20P17024 532 aa7□□□□□ -1.29
PSEN1-209ENST00000553855 SRD5A1P18405 259 aa7□□□□□ -1.29
PSEN1-209ENST00000553855 CAPGP40121 348 aa7□□□□□ -1.29
PSEN1-209ENST00000553855 GBX2P52951 348 aaPredicted RBP7□□□□□ -1.29
PSEN1-209ENST00000553855 GNB2P62879 340 aa7□□□□□ -1.29
PSEN1-209ENST00000553855 GNG3P63215 75 aa7□□□□□ -1.29
PSEN1-209ENST00000553855 ZNF85Q03923 595 aa7□□□□□ -1.29
PSEN1-209ENST00000553855 MFGE8Q08431 387 aaPredicted RBP7□□□□□ -1.29
PSEN1-209ENST00000553855 KIR3DS1Q14943 382 aa7□□□□□ -1.29
PSEN1-209ENST00000553855 ZMYND11Q15326 602 aa7□□□□□ -1.29
PSEN1-209ENST00000553855 MPPED2Q15777 294 aa7□□□□□ -1.29
PSEN1-209ENST00000553855 MICBQ29980 383 aa7□□□□□ -1.29
PSEN1-209ENST00000553855 ODF4Q2M2E3 257 aa7□□□□□ -1.29
PSEN1-209ENST00000553855 CR1LQ2VPA4 569 aa7□□□□□ -1.29
PSEN1-209ENST00000553855 SPRNQ5BIV9 151 aa7□□□□□ -1.29
PSEN1-209ENST00000553855 TOR2AQ5JU69 321 aa7□□□□□ -1.29
PSEN1-209ENST00000553855 FAM120AOSQ5T036 256 aa7□□□□□ -1.29
PSEN1-209ENST00000553855 OGFRL1Q5TC84 451 aaPredicted RBP7□□□□□ -1.29
PSEN1-209ENST00000553855 ZNF691Q5VV52 312 aa7□□□□□ -1.29
PSEN1-209ENST00000553855 BTNL3Q6UXE8 466 aa7□□□□□ -1.29
PSEN1-209ENST00000553855 TMPRSS11AQ6ZMR5 421 aa7□□□□□ -1.29
PSEN1-209ENST00000553855 DCDC5Q6ZRR9 648 aa7□□□□□ -1.29
PSEN1-209ENST00000553855 SSX6Q7RTT6 188 aa7□□□□□ -1.29
PSEN1-209ENST00000553855 RFLNBQ8N5W9 214 aa7□□□□□ -1.29
PSEN1-209ENST00000553855 ZNF676Q8N7Q3 588 aa7□□□□□ -1.29
PSEN1-209ENST00000553855 OR1M1Q8NGA1 313 aa7□□□□□ -1.29
PSEN1-209ENST00000553855 OR5A2Q8NGI9 324 aa7□□□□□ -1.29
PSEN1-209ENST00000553855 ZNF671Q8TAW3 534 aa7□□□□□ -1.29
PSEN1-209ENST00000553855 LRRC29Q8WV35 223 aa7□□□□□ -1.29
PSEN1-209ENST00000553855 LGALS12Q96DT0 336 aa7□□□□□ -1.29
PSEN1-209ENST00000553855 LYZL4Q96KX0 146 aa7□□□□□ -1.29
PSEN1-209ENST00000553855 MRI1Q9BV20 369 aa7□□□□□ -1.29
PSEN1-209ENST00000553855 ALG8Q9BVK2 526 aa7□□□□□ -1.29
PSEN1-209ENST00000553855 COMMD4Q9H0A8 199 aa7□□□□□ -1.29
PSEN1-209ENST00000553855 AMBNQ9NP70 447 aa7□□□□□ -1.29
PSEN1-209ENST00000553855 ACOXLQ9NUZ1 547 aa7□□□□□ -1.29
PSEN1-209ENST00000553855 ERVK-18Q9QC07 812 aa7□□□□□ -1.29
PSEN1-209ENST00000553855 EXOGQ9Y2C4 368 aaKnown RBP7□□□□□ -1.29
PSEN1-209ENST00000553855 LRCH1Q9Y2L9 728 aa7□□□□□ -1.29
PSEN1-209ENST00000553855 HIVEP2P31629 2446 aa7□□□□□ -1.29
PSEN1-209ENST00000553855 ACANP16112 2415 aa6.99□□□□□ -1.29
PSEN1-209ENST00000553855 OOEPA6NGQ2 149 aa6.99□□□□□ -1.29
PSEN1-209ENST00000553855 NKX6-3A6NJ46 265 aa6.99□□□□□ -1.29
PSEN1-209ENST00000553855 DHRS7CA6NNS2 312 aa6.99□□□□□ -1.29
PSEN1-209ENST00000553855 CEACAM18A8MTB9 384 aa6.99□□□□□ -1.29
PSEN1-209ENST00000553855 ZNF732B4DXR9 585 aa6.99□□□□□ -1.29
PSEN1-209ENST00000553855 DLGAP1O14490 977 aa6.99□□□□□ -1.29
PSEN1-209ENST00000553855 WNT9BO14905 357 aa6.99□□□□□ -1.29
PSEN1-209ENST00000553855 PLPP2O43688 288 aa6.99□□□□□ -1.29
PSEN1-209ENST00000553855 PTBP3O95758 552 aaKnown RBP6.99□□□□□ -1.29
PSEN1-209ENST00000553855 CYB5AP00167 134 aa6.99□□□□□ -1.29
PSEN1-209ENST00000553855 PNPP00491 289 aa6.99□□□□□ -1.29
PSEN1-209ENST00000553855 CCDC159P0C7I6 412 aa6.99□□□□□ -1.29
PSEN1-209ENST00000553855 CLEC2LP0C7M8 214 aa6.99□□□□□ -1.29
PSEN1-209ENST00000553855 FAM157CP0CG43 387 aa6.99□□□□□ -1.29
PSEN1-209ENST00000553855 FAHP16930 419 aa6.99□□□□□ -1.29
PSEN1-209ENST00000553855 ACKR3P25106 362 aa6.99□□□□□ -1.29
PSEN1-209ENST00000553855 DCKP27707 260 aa6.99□□□□□ -1.29
PSEN1-209ENST00000553855 PSMB10P40306 273 aa6.99□□□□□ -1.29
PSEN1-209ENST00000553855 PITPNBP48739 271 aa6.99□□□□□ -1.29
PSEN1-209ENST00000553855 NPY4RP50391 375 aa6.99□□□□□ -1.29
PSEN1-209ENST00000553855 GPM6AP51674 278 aa6.99□□□□□ -1.29
PSEN1-209ENST00000553855 LCN2P80188 198 aa6.99□□□□□ -1.29
PSEN1-209ENST00000553855 ZNF154Q13106 437 aa6.99□□□□□ -1.29
PSEN1-209ENST00000553855 GALEQ14376 348 aa6.99□□□□□ -1.29
PSEN1-209ENST00000553855 CNN3Q15417 329 aaKnown RBP6.99□□□□□ -1.29
PSEN1-209ENST00000553855 CEACAM21Q3KPI0 293 aa6.99□□□□□ -1.29
PSEN1-209ENST00000553855 ZNF404Q494X3 552 aa6.99□□□□□ -1.29
PSEN1-209ENST00000553855 CDONQ4KMG0 1287 aa6.99□□□□□ -1.29
PSEN1-209ENST00000553855 CT83Q5H943 113 aa6.99□□□□□ -1.29
PSEN1-209ENST00000553855 CEP78Q5JTW2 689 aa6.99□□□□□ -1.29
PSEN1-209ENST00000553855 CD276Q5ZPR3 534 aa6.99□□□□□ -1.29
PSEN1-209ENST00000553855 LHFPL3Q86UP9 236 aa6.99□□□□□ -1.29
PSEN1-209ENST00000553855 CATSPERDQ86XM0 798 aa6.99□□□□□ -1.29
PSEN1-209ENST00000553855 ZNF573Q86YE8 665 aa6.99□□□□□ -1.29
PSEN1-209ENST00000553855 SYS1Q8N2H4 156 aa6.99□□□□□ -1.29
PSEN1-209ENST00000553855 OR10Z1Q8NGY1 313 aa6.99□□□□□ -1.29
PSEN1-209ENST00000553855 OR5P3Q8WZ94 311 aa6.99□□□□□ -1.29
PSEN1-209ENST00000553855 C10orf35Q96D05 121 aa6.99□□□□□ -1.29
PSEN1-209ENST00000553855 C4orf36Q96KX1 117 aa6.99□□□□□ -1.29
PSEN1-209ENST00000553855 TECTBQ96PL2 329 aa6.99□□□□□ -1.29
PSEN1-209ENST00000553855 TMEM246Q9BRR3 403 aa6.99□□□□□ -1.29
PSEN1-209ENST00000553855 SSBP3Q9BWW4 388 aaPredicted RBP6.99□□□□□ -1.29
PSEN1-209ENST00000553855 TMEM165Q9HC07 324 aa6.99□□□□□ -1.29
PSEN1-209ENST00000553855 G6PC2Q9NQR9 355 aa6.99□□□□□ -1.29
PSEN1-209ENST00000553855 DCAF16Q9NXF7 216 aa6.99□□□□□ -1.29
PSEN1-209ENST00000553855 CLN8Q9UBY8 286 aa6.99□□□□□ -1.29
PSEN1-209ENST00000553855 SLC22A13Q9Y226 551 aa6.99□□□□□ -1.29
PSEN1-209ENST00000553855 POLDIP2Q9Y2S7 368 aa6.99□□□□□ -1.29
PSEN1-209ENST00000553855 EXOSC1Q9Y3B2 195 aaKnown RBP6.99□□□□□ -1.29
PSEN1-209ENST00000553855 ABCA2Q9BZC7 2435 aa6.99□□□□□ -1.29
PSEN1-209ENST00000553855 LOC107986453A0A1B0GWG9 222 aa6.98□□□□□ -1.29
PSEN1-209ENST00000553855 EFCAB10A6NFE3 127 aa6.98□□□□□ -1.29
PSEN1-209ENST00000553855 ANKRD61A6NGH8 418 aa6.98□□□□□ -1.29
PSEN1-209ENST00000553855 PRR32B1ATL7 298 aa6.98□□□□□ -1.29
PSEN1-209ENST00000553855 E9PQ18 207 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms