RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 DHRS12A0PJE2 317 aa10.26□□□□□ -0.77
VPS29-211ENST00000553128 C17orf98A8MV24 154 aa10.26□□□□□ -0.77
VPS29-211ENST00000553128 ZNF878C9JN71 531 aa10.26□□□□□ -0.77
VPS29-211ENST00000553128 MTRF1O75570 445 aaKnown RBP10.26□□□□□ -0.77
VPS29-211ENST00000553128 SERPINA1P01009 418 aa10.26□□□□□ -0.77
VPS29-211ENST00000553128 AMY1AP04745 511 aa10.26□□□□□ -0.77
VPS29-211ENST00000553128 AMY2AP04746 511 aa10.26□□□□□ -0.77
VPS29-211ENST00000553128 SNRNP70P08621 437 aaKnown RBP10.26□□□□□ -0.77
VPS29-211ENST00000553128 ZNF121P58317 390 aaPredicted RBP10.26□□□□□ -0.77
VPS29-211ENST00000553128 DYNC1I2Q13409 638 aaKnown RBP10.26□□□□□ -0.77
VPS29-211ENST00000553128 ZNF770Q6IQ21 691 aaPredicted RBP10.26□□□□□ -0.77
VPS29-211ENST00000553128 ADAMTSL5Q6ZMM2 481 aa10.26□□□□□ -0.77
VPS29-211ENST00000553128 ZNF511Q8NB15 262 aa10.26□□□□□ -0.77
VPS29-211ENST00000553128 CSNK2A3Q8NEV1 391 aa10.26□□□□□ -0.77
VPS29-211ENST00000553128 Q8NFD4 153 aa10.26□□□□□ -0.77
VPS29-211ENST00000553128 OR11H6Q8NGC7 330 aa10.26□□□□□ -0.77
VPS29-211ENST00000553128 ZNF488Q96MN9 340 aa10.26□□□□□ -0.77
VPS29-211ENST00000553128 RCHY1Q96PM5 261 aa10.26□□□□□ -0.77
VPS29-211ENST00000553128 P2RX4Q99571 388 aa10.26□□□□□ -0.77
VPS29-211ENST00000553128 TMBIM4Q9HC24 238 aa10.26□□□□□ -0.77
VPS29-211ENST00000553128 MPC1Q9Y5U8 109 aa10.26□□□□□ -0.77
VPS29-211ENST00000553128 hCG_1809904A0A1W2PP81 198 aa10.25□□□□□ -0.77
VPS29-211ENST00000553128 A0A1W2PPE2 198 aa10.25□□□□□ -0.77
VPS29-211ENST00000553128 A0A1W2PPH5 198 aa10.25□□□□□ -0.77
VPS29-211ENST00000553128 A0A1W2PR64 198 aa10.25□□□□□ -0.77
VPS29-211ENST00000553128 A0A1W2PRV1 198 aa10.25□□□□□ -0.77
VPS29-211ENST00000553128 ZNF593O00488 134 aaPredicted RBP10.25□□□□□ -0.77
VPS29-211ENST00000553128 CXCR6O00574 342 aa10.25□□□□□ -0.77
VPS29-211ENST00000553128 CST4P01036 141 aa10.25□□□□□ -0.77
VPS29-211ENST00000553128 GYPBP06028 91 aa10.25□□□□□ -0.77
VPS29-211ENST00000553128 OR12D2P58182 307 aa10.25□□□□□ -0.77
VPS29-211ENST00000553128 RPL23AP62750 156 aaKnown RBP10.25□□□□□ -0.77
VPS29-211ENST00000553128 ACP7Q6ZNF0 438 aa10.25□□□□□ -0.77
VPS29-211ENST00000553128 OR2W3Q7Z3T1 314 aa10.25□□□□□ -0.77
VPS29-211ENST00000553128 ZNF329Q86UD4 541 aa10.25□□□□□ -0.77
VPS29-211ENST00000553128 CYP4Z1Q86W10 505 aa10.25□□□□□ -0.77
VPS29-211ENST00000553128 BATF2Q8N1L9 274 aa10.25□□□□□ -0.77
VPS29-211ENST00000553128 OR51D1Q8NGF3 324 aa10.25□□□□□ -0.77
VPS29-211ENST00000553128 OR13D1Q8NGV5 346 aa10.25□□□□□ -0.77
VPS29-211ENST00000553128 OR51I2Q9H344 312 aa10.25□□□□□ -0.77
VPS29-211ENST00000553128 PALMDQ9NP74 551 aa10.25□□□□□ -0.77
VPS29-211ENST00000553128 NDUFAF4Q9P032 175 aa10.25□□□□□ -0.77
VPS29-211ENST00000553128 ALMS1Q8TCU4 4167 aa10.25□□□□□ -0.77
VPS29-211ENST00000553128 ZNF732B4DXR9 585 aa10.24□□□□□ -0.77
VPS29-211ENST00000553128 RAMP3O60896 148 aa10.24□□□□□ -0.77
VPS29-211ENST00000553128 AZGP1P25311 298 aaKnown RBP10.24□□□□□ -0.77
VPS29-211ENST00000553128 PRDX2P32119 198 aa10.24□□□□□ -0.77
VPS29-211ENST00000553128 GRB2P62993 217 aaKnown RBP10.24□□□□□ -0.77
VPS29-211ENST00000553128 EIF2B1Q14232 305 aaKnown RBP10.24□□□□□ -0.77
VPS29-211ENST00000553128 CEP78Q5JTW2 689 aa10.24□□□□□ -0.77
VPS29-211ENST00000553128 LCN8Q6JVE9 175 aa10.24□□□□□ -0.77
VPS29-211ENST00000553128 SBSPONQ8IVN8 264 aa10.24□□□□□ -0.77
VPS29-211ENST00000553128 TIGD4Q8IY51 512 aa10.24□□□□□ -0.77
VPS29-211ENST00000553128 STON2Q8WXE9 905 aa10.24□□□□□ -0.77
VPS29-211ENST00000553128 AQP3Q92482 292 aa10.24□□□□□ -0.77
VPS29-211ENST00000553128 AMELYQ99218 206 aa10.24□□□□□ -0.77
VPS29-211ENST00000553128 C1orf21Q9H246 121 aa10.24□□□□□ -0.77
VPS29-211ENST00000553128 TBC1D23Q9NUY8 699 aa10.24□□□□□ -0.77
VPS29-211ENST00000553128 NPPAP01160 153 aa10.23□□□□□ -0.77
VPS29-211ENST00000553128 IGHV1-8P0DP01 117 aa10.23□□□□□ -0.77
VPS29-211ENST00000553128 CLUP10909 449 aa10.23□□□□□ -0.77
VPS29-211ENST00000553128 CHATP28329 748 aa10.23□□□□□ -0.77
VPS29-211ENST00000553128 HSD11B1P28845 292 aa10.23□□□□□ -0.77
VPS29-211ENST00000553128 MYCNOSP40205 109 aa10.23□□□□□ -0.77
VPS29-211ENST00000553128 COQ5Q5HYK3 327 aa10.23□□□□□ -0.77
VPS29-211ENST00000553128 C9orf152Q5JTZ5 239 aa10.23□□□□□ -0.77
VPS29-211ENST00000553128 MEPCEQ7L2J0 689 aaKnown RBP10.23□□□□□ -0.77
VPS29-211ENST00000553128 TCF23Q7RTU1 214 aa10.23□□□□□ -0.77
VPS29-211ENST00000553128 CALHM1Q8IU99 346 aa10.23□□□□□ -0.77
VPS29-211ENST00000553128 ZDHHC23Q8IYP9 409 aa10.23□□□□□ -0.77
VPS29-211ENST00000553128 OSR2Q8N2R0 312 aa10.23□□□□□ -0.77
VPS29-211ENST00000553128 ZNF561Q8N587 486 aa10.23□□□□□ -0.77
VPS29-211ENST00000553128 NDNFQ8TB73 568 aa10.23□□□□□ -0.77
VPS29-211ENST00000553128 PGAM5Q96HS1 289 aa10.23□□□□□ -0.77
VPS29-211ENST00000553128 C7orf34Q96L11 122 aa10.23□□□□□ -0.77
VPS29-211ENST00000553128 DHRS1Q96LJ7 313 aa10.23□□□□□ -0.77
VPS29-211ENST00000553128 SLC25A33Q9BSK2 321 aa10.23□□□□□ -0.77
VPS29-211ENST00000553128 MYLK2Q9H1R3 596 aa10.23□□□□□ -0.77
VPS29-211ENST00000553128 OR10A2Q9H208 303 aa10.23□□□□□ -0.77
VPS29-211ENST00000553128 EGLN3Q9H6Z9 239 aa10.23□□□□□ -0.77
VPS29-211ENST00000553128 LIN7BQ9HAP6 207 aa10.23□□□□□ -0.77
VPS29-211ENST00000553128 VNN3Q9NY84 501 aa10.23□□□□□ -0.77
VPS29-211ENST00000553128 A0A0G2JND7 137 aa10.22□□□□□ -0.77
VPS29-211ENST00000553128 PSMB11A5LHX3 300 aa10.22□□□□□ -0.77
VPS29-211ENST00000553128 SLC1A7O00341 560 aa10.22□□□□□ -0.77
VPS29-211ENST00000553128 SLC22A2O15244 555 aa10.22□□□□□ -0.77
VPS29-211ENST00000553128 IDH3BO43837 385 aa10.22□□□□□ -0.77
VPS29-211ENST00000553128 TK1P04183 234 aa10.22□□□□□ -0.77
VPS29-211ENST00000553128 ZNF728P0DKX0 622 aa10.22□□□□□ -0.77
VPS29-211ENST00000553128 NCK1P16333 377 aa10.22□□□□□ -0.77
VPS29-211ENST00000553128 RHCEP18577 417 aa10.22□□□□□ -0.77
VPS29-211ENST00000553128 CFL1P23528 166 aaKnown RBP10.22□□□□□ -0.77
VPS29-211ENST00000553128 ECI1P42126 302 aa10.22□□□□□ -0.77
VPS29-211ENST00000553128 SLC15A1P46059 708 aa10.22□□□□□ -0.77
VPS29-211ENST00000553128 RAB25P57735 213 aa10.22□□□□□ -0.77
VPS29-211ENST00000553128 ACTA2P62736 377 aa10.22□□□□□ -0.77
VPS29-211ENST00000553128 ACTG2P63267 376 aa10.22□□□□□ -0.77
VPS29-211ENST00000553128 ACTC1P68032 377 aa10.22□□□□□ -0.77
VPS29-211ENST00000553128 ACTA1P68133 377 aa10.22□□□□□ -0.77
VPS29-211ENST00000553128 LIPEQ05469 1076 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms