RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 J3QT63 122 aa9.8□□□□□ -0.84
TRAFD1-209ENST00000552896 CDIPTO14735 213 aa9.8□□□□□ -0.84
TRAFD1-209ENST00000552896 MYL12BO14950 172 aa9.8□□□□□ -0.84
TRAFD1-209ENST00000552896 LMX1BO60663 402 aa9.8□□□□□ -0.84
TRAFD1-209ENST00000552896 ZNF205O95201 554 aa9.8□□□□□ -0.84
TRAFD1-209ENST00000552896 MUC1P15941 1255 aaPredicted RBP9.8□□□□□ -0.84
TRAFD1-209ENST00000552896 ZNF20P17024 532 aa9.8□□□□□ -0.84
TRAFD1-209ENST00000552896 EGR1P18146 543 aa9.8□□□□□ -0.84
TRAFD1-209ENST00000552896 TAS2R43P59537 309 aa9.8□□□□□ -0.84
TRAFD1-209ENST00000552896 CNN3Q15417 329 aaKnown RBP9.8□□□□□ -0.84
TRAFD1-209ENST00000552896 ESCO2Q56NI9 601 aa9.8□□□□□ -0.84
TRAFD1-209ENST00000552896 RNLSQ5VYX0 342 aa9.8□□□□□ -0.84
TRAFD1-209ENST00000552896 XAF1Q6GPH4 301 aa9.8□□□□□ -0.84
TRAFD1-209ENST00000552896 RPL22L1Q6P5R6 122 aaKnown RBP9.8□□□□□ -0.84
TRAFD1-209ENST00000552896 UTS2BQ765I0 119 aa9.8□□□□□ -0.84
TRAFD1-209ENST00000552896 NLRC3Q7RTR2 1065 aa9.8□□□□□ -0.84
TRAFD1-209ENST00000552896 ZNF573Q86YE8 665 aa9.8□□□□□ -0.84
TRAFD1-209ENST00000552896 OR51A4Q8NGJ6 313 aa9.8□□□□□ -0.84
TRAFD1-209ENST00000552896 OR13C3Q8NGS6 347 aa9.8□□□□□ -0.84
TRAFD1-209ENST00000552896 OR10AC1Q8NH08 325 aa9.8□□□□□ -0.84
TRAFD1-209ENST00000552896 RPL3LQ92901 407 aaKnown RBP9.8□□□□□ -0.84
TRAFD1-209ENST00000552896 TMEM186Q96B77 213 aa9.8□□□□□ -0.84
TRAFD1-209ENST00000552896 C12orf43Q96C57 262 aaKnown RBP9.8□□□□□ -0.84
TRAFD1-209ENST00000552896 SMIM19Q96E16 107 aa9.8□□□□□ -0.84
TRAFD1-209ENST00000552896 ADAT3Q96EY9 351 aaPredicted RBP9.8□□□□□ -0.84
TRAFD1-209ENST00000552896 NEIL1Q96FI4 390 aaPredicted RBP9.8□□□□□ -0.84
TRAFD1-209ENST00000552896 ZNF184Q99676 751 aaPredicted RBP9.8□□□□□ -0.84
TRAFD1-209ENST00000552896 PDCD1LG2Q9BQ51 273 aa9.8□□□□□ -0.84
TRAFD1-209ENST00000552896 SCN3BQ9NY72 215 aa9.8□□□□□ -0.84
TRAFD1-209ENST00000552896 LPAR3Q9UBY5 353 aa9.8□□□□□ -0.84
TRAFD1-209ENST00000552896 CLEC2DQ9UHP7 191 aa9.8□□□□□ -0.84
TRAFD1-209ENST00000552896 POLR3KQ9Y2Y1 108 aaPredicted RBP9.8□□□□□ -0.84
TRAFD1-209ENST00000552896 PPIAL4CA0A0B4J2A2 164 aa9.79□□□□□ -0.84
TRAFD1-209ENST00000552896 A6NIN4 97 aa9.79□□□□□ -0.84
TRAFD1-209ENST00000552896 C3orf80F5H4A9 247 aa9.79□□□□□ -0.84
TRAFD1-209ENST00000552896 NDUFA2O43678 99 aa9.79□□□□□ -0.84
TRAFD1-209ENST00000552896 FOXH1O75593 365 aa9.79□□□□□ -0.84
TRAFD1-209ENST00000552896 SERPINA3P01011 423 aa9.79□□□□□ -0.84
TRAFD1-209ENST00000552896 CDK1P06493 297 aa9.79□□□□□ -0.84
TRAFD1-209ENST00000552896 GATA3P23771 443 aa9.79□□□□□ -0.84
TRAFD1-209ENST00000552896 MPZP25189 248 aa9.79□□□□□ -0.84
TRAFD1-209ENST00000552896 C21orf33P30042 268 aaPredicted RBP9.79□□□□□ -0.84
TRAFD1-209ENST00000552896 GTF2A1P52655 376 aaPredicted RBP9.79□□□□□ -0.84
TRAFD1-209ENST00000552896 WNT4P56705 351 aa9.79□□□□□ -0.84
TRAFD1-209ENST00000552896 SLC35A2P78381 396 aa9.79□□□□□ -0.84
TRAFD1-209ENST00000552896 HOXA4Q00056 320 aaPredicted RBP9.79□□□□□ -0.84
TRAFD1-209ENST00000552896 MICBQ29980 383 aa9.79□□□□□ -0.84
TRAFD1-209ENST00000552896 FAM90A1Q86YD7 464 aa9.79□□□□□ -0.84
TRAFD1-209ENST00000552896 BOLLQ8N9W6 283 aaKnown RBP9.79□□□□□ -0.84
TRAFD1-209ENST00000552896 C19orf18Q8NEA5 215 aa9.79□□□□□ -0.84
TRAFD1-209ENST00000552896 OR8B3Q8NGG8 313 aa9.79□□□□□ -0.84
TRAFD1-209ENST00000552896 TSEN15Q8WW01 171 aaKnown RBP9.79□□□□□ -0.84
TRAFD1-209ENST00000552896 AQP3Q92482 292 aa9.79□□□□□ -0.84
TRAFD1-209ENST00000552896 MYDGFQ969H8 173 aa9.79□□□□□ -0.84
TRAFD1-209ENST00000552896 OR8B2Q96RD0 313 aa9.79□□□□□ -0.84
TRAFD1-209ENST00000552896 SSBP3Q9BWW4 388 aaPredicted RBP9.79□□□□□ -0.84
TRAFD1-209ENST00000552896 METTL17Q9H7H0 456 aaPredicted RBP9.79□□□□□ -0.84
TRAFD1-209ENST00000552896 LPAR2Q9HBW0 351 aa9.79□□□□□ -0.84
TRAFD1-209ENST00000552896 PAK1IP1Q9NWT1 392 aaPredicted RBP9.79□□□□□ -0.84
TRAFD1-209ENST00000552896 HIF1ANQ9NWT6 349 aa9.79□□□□□ -0.84
TRAFD1-209ENST00000552896 BABAM2Q9NXR7 383 aa9.79□□□□□ -0.84
TRAFD1-209ENST00000552896 ERVK-18Q9QC07 812 aa9.79□□□□□ -0.84
TRAFD1-209ENST00000552896 CDC42EP3Q9UKI2 254 aa9.79□□□□□ -0.84
TRAFD1-209ENST00000552896 SLC7A11Q9UPY5 501 aa9.79□□□□□ -0.84
TRAFD1-209ENST00000552896 POLDIP2Q9Y2S7 368 aa9.79□□□□□ -0.84
TRAFD1-209ENST00000552896 A0A0G2JMP0 313 aa9.78□□□□□ -0.84
TRAFD1-209ENST00000552896 A0A0X1KG70 313 aa9.78□□□□□ -0.84
TRAFD1-209ENST00000552896 KIAA1324LA8MWY0 1029 aaPredicted RBP9.78□□□□□ -0.84
TRAFD1-209ENST00000552896 OGG1O15527 345 aa9.78□□□□□ -0.84
TRAFD1-209ENST00000552896 PLPP2O43688 288 aa9.78□□□□□ -0.84
TRAFD1-209ENST00000552896 RRP9O43818 475 aaKnown RBP9.78□□□□□ -0.84
TRAFD1-209ENST00000552896 CRLF1O75462 422 aa9.78□□□□□ -0.84
TRAFD1-209ENST00000552896 RHBDL1O75783 438 aa9.78□□□□□ -0.84
TRAFD1-209ENST00000552896 LALBAP00709 142 aa9.78□□□□□ -0.84
TRAFD1-209ENST00000552896 WNT2P09544 360 aa9.78□□□□□ -0.84
TRAFD1-209ENST00000552896 HNF1AP20823 631 aa9.78□□□□□ -0.84
TRAFD1-209ENST00000552896 HAAOP46952 286 aa9.78□□□□□ -0.84
TRAFD1-209ENST00000552896 PITPNBP48739 271 aa9.78□□□□□ -0.84
TRAFD1-209ENST00000552896 NPY4RP50391 375 aa9.78□□□□□ -0.84
TRAFD1-209ENST00000552896 FUT6P51993 359 aa9.78□□□□□ -0.84
TRAFD1-209ENST00000552896 SEC61A1P61619 476 aaKnown RBP9.78□□□□□ -0.84
TRAFD1-209ENST00000552896 LCN2P80188 198 aa9.78□□□□□ -0.84
TRAFD1-209ENST00000552896 BDH1Q02338 343 aa9.78□□□□□ -0.84
TRAFD1-209ENST00000552896 UBE2V2Q15819 145 aa9.78□□□□□ -0.84
TRAFD1-209ENST00000552896 DMRTC1Q5HYR2 192 aa9.78□□□□□ -0.84
TRAFD1-209ENST00000552896 STUMQ69YW2 141 aa9.78□□□□□ -0.84
TRAFD1-209ENST00000552896 DMKNQ6E0U4 476 aaPredicted RBP9.78□□□□□ -0.84
TRAFD1-209ENST00000552896 SFRP4Q6FHJ7 346 aaPredicted RBP9.78□□□□□ -0.84
TRAFD1-209ENST00000552896 HAGHLQ6PII5 290 aaPredicted RBP9.78□□□□□ -0.84
TRAFD1-209ENST00000552896 PARP16Q8N5Y8 322 aa9.78□□□□□ -0.84
TRAFD1-209ENST00000552896 POC1AQ8NBT0 407 aa9.78□□□□□ -0.84
TRAFD1-209ENST00000552896 DNAAF1Q8NEP3 725 aa9.78□□□□□ -0.84
TRAFD1-209ENST00000552896 OR4M2Q8NGB6 313 aa9.78□□□□□ -0.84
TRAFD1-209ENST00000552896 TRMT10AQ8TBZ6 339 aaKnown RBP9.78□□□□□ -0.84
TRAFD1-209ENST00000552896 GPR148Q8TDV2 347 aa9.78□□□□□ -0.84
TRAFD1-209ENST00000552896 NPRL2Q8WTW4 380 aa9.78□□□□□ -0.84
TRAFD1-209ENST00000552896 RGP1Q92546 391 aaPredicted RBP9.78□□□□□ -0.84
TRAFD1-209ENST00000552896 SPSB1Q96BD6 273 aa9.78□□□□□ -0.84
TRAFD1-209ENST00000552896 FGGYQ96C11 551 aa9.78□□□□□ -0.84
TRAFD1-209ENST00000552896 CNBD2Q96M20 576 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms