RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 IFNA2P01563 188 aa8.64□□□□□ -1.03
TRAFD1-208ENST00000552890 IGHV2-5P01817 119 aa8.64□□□□□ -1.03
TRAFD1-208ENST00000552890 MSMBP08118 114 aa8.64□□□□□ -1.03
TRAFD1-208ENST00000552890 IGHV4-31P0DP07 118 aa8.64□□□□□ -1.03
TRAFD1-208ENST00000552890 LYNX1P0DP58 116 aa8.64□□□□□ -1.03
TRAFD1-208ENST00000552890 RPS2P15880 293 aaKnown RBP8.64□□□□□ -1.03
TRAFD1-208ENST00000552890 ETV1P50549 477 aa8.64□□□□□ -1.03
TRAFD1-208ENST00000552890 GPM6AP51674 278 aa8.64□□□□□ -1.03
TRAFD1-208ENST00000552890 RIPPLY3P57055 190 aa8.64□□□□□ -1.03
TRAFD1-208ENST00000552890 GABARAPL2P60520 117 aa8.64□□□□□ -1.03
TRAFD1-208ENST00000552890 IL24Q13007 206 aa8.64□□□□□ -1.03
TRAFD1-208ENST00000552890 ZNF154Q13106 437 aa8.64□□□□□ -1.03
TRAFD1-208ENST00000552890 SPHARQ15513 63 aa8.64□□□□□ -1.03
TRAFD1-208ENST00000552890 ZNF404Q494X3 552 aa8.64□□□□□ -1.03
TRAFD1-208ENST00000552890 TMEM255AQ5JRV8 349 aa8.64□□□□□ -1.03
TRAFD1-208ENST00000552890 TEX36Q5VZQ5 186 aa8.64□□□□□ -1.03
TRAFD1-208ENST00000552890 BTNL3Q6UXE8 466 aa8.64□□□□□ -1.03
TRAFD1-208ENST00000552890 PRSS35Q8N3Z0 413 aa8.64□□□□□ -1.03
TRAFD1-208ENST00000552890 RFLNBQ8N5W9 214 aa8.64□□□□□ -1.03
TRAFD1-208ENST00000552890 PARP16Q8N5Y8 322 aa8.64□□□□□ -1.03
TRAFD1-208ENST00000552890 NANOGP1Q8N7R0 232 aa8.64□□□□□ -1.03
TRAFD1-208ENST00000552890 PNLDC1Q8NA58 520 aaKnown RBP8.64□□□□□ -1.03
TRAFD1-208ENST00000552890 FCGR1BQ92637 280 aa8.64□□□□□ -1.03
TRAFD1-208ENST00000552890 GTF3AQ92664 365 aaKnown RBP8.64□□□□□ -1.03
TRAFD1-208ENST00000552890 TMIGD2Q96BF3 282 aa8.64□□□□□ -1.03
TRAFD1-208ENST00000552890 SHARPINQ9H0F6 387 aa8.64□□□□□ -1.03
TRAFD1-208ENST00000552890 OR51I2Q9H344 312 aa8.64□□□□□ -1.03
TRAFD1-208ENST00000552890 DUSP21Q9H596 190 aa8.64□□□□□ -1.03
TRAFD1-208ENST00000552890 ZCCHC4Q9H5U6 513 aa8.64□□□□□ -1.03
TRAFD1-208ENST00000552890 FKBP14Q9NWM8 211 aa8.64□□□□□ -1.03
TRAFD1-208ENST00000552890 UBAP1Q9NZ09 502 aa8.64□□□□□ -1.03
TRAFD1-208ENST00000552890 KAAG1Q9UBP8 84 aa8.64□□□□□ -1.03
TRAFD1-208ENST00000552890 CLN8Q9UBY8 286 aa8.64□□□□□ -1.03
TRAFD1-208ENST00000552890 OR5V1Q9UGF6 321 aa8.64□□□□□ -1.03
TRAFD1-208ENST00000552890 POLR3KQ9Y2Y1 108 aaPredicted RBP8.64□□□□□ -1.03
TRAFD1-208ENST00000552890 A0A1W2PPH5 198 aa8.63□□□□□ -1.03
TRAFD1-208ENST00000552890 PQLC2LA1A4F0 135 aa8.63□□□□□ -1.03
TRAFD1-208ENST00000552890 MEGF11A6BM72 1044 aa8.63□□□□□ -1.03
TRAFD1-208ENST00000552890 CDIPTO14735 213 aa8.63□□□□□ -1.03
TRAFD1-208ENST00000552890 MAGEB4O15481 346 aaPredicted RBP8.63□□□□□ -1.03
TRAFD1-208ENST00000552890 PLPP2O43688 288 aa8.63□□□□□ -1.03
TRAFD1-208ENST00000552890 SULT1B1O43704 296 aa8.63□□□□□ -1.03
TRAFD1-208ENST00000552890 XPNPEP2O43895 674 aa8.63□□□□□ -1.03
TRAFD1-208ENST00000552890 ZFPL1O95159 310 aa8.63□□□□□ -1.03
TRAFD1-208ENST00000552890 LY6G6DO95868 133 aa8.63□□□□□ -1.03
TRAFD1-208ENST00000552890 RAB3AP20336 220 aa8.63□□□□□ -1.03
TRAFD1-208ENST00000552890 PSMB10P40306 273 aa8.63□□□□□ -1.03
TRAFD1-208ENST00000552890 KIR3DL2P43630 455 aa8.63□□□□□ -1.03
TRAFD1-208ENST00000552890 HAAOP46952 286 aa8.63□□□□□ -1.03
TRAFD1-208ENST00000552890 MTCP1P56278 107 aa8.63□□□□□ -1.03
TRAFD1-208ENST00000552890 LMO4P61968 165 aa8.63□□□□□ -1.03
TRAFD1-208ENST00000552890 GNB2P62879 340 aa8.63□□□□□ -1.03
TRAFD1-208ENST00000552890 SLC35A2P78381 396 aa8.63□□□□□ -1.03
TRAFD1-208ENST00000552890 ZMYND11Q15326 602 aa8.63□□□□□ -1.03
TRAFD1-208ENST00000552890 ODF4Q2M2E3 257 aa8.63□□□□□ -1.03
TRAFD1-208ENST00000552890 LRRC10Q5BKY1 277 aa8.63□□□□□ -1.03
TRAFD1-208ENST00000552890 ATPAF1Q5TC12 328 aaPredicted RBP8.63□□□□□ -1.03
TRAFD1-208ENST00000552890 WDR82Q6UXN9 313 aa8.63□□□□□ -1.03
TRAFD1-208ENST00000552890 LURAP1LQ8IV03 231 aa8.63□□□□□ -1.03
TRAFD1-208ENST00000552890 CDH26Q8IXH8 852 aa8.63□□□□□ -1.03
TRAFD1-208ENST00000552890 SAXO1Q8IYX7 474 aa8.63□□□□□ -1.03
TRAFD1-208ENST00000552890 ZSCAN4Q8NAM6 433 aaPredicted RBP8.63□□□□□ -1.03
TRAFD1-208ENST00000552890 SCCPDHQ8NBX0 429 aa8.63□□□□□ -1.03
TRAFD1-208ENST00000552890 LRRC29Q8WV35 223 aa8.63□□□□□ -1.03
TRAFD1-208ENST00000552890 TMEM186Q96B77 213 aa8.63□□□□□ -1.03
TRAFD1-208ENST00000552890 FGGYQ96C11 551 aa8.63□□□□□ -1.03
TRAFD1-208ENST00000552890 CNBD2Q96M20 576 aa8.63□□□□□ -1.03
TRAFD1-208ENST00000552890 S100A13Q99584 98 aa8.63□□□□□ -1.03
TRAFD1-208ENST00000552890 ZNF649Q9BS31 505 aa8.63□□□□□ -1.03
TRAFD1-208ENST00000552890 SEBOXQ9HB31 216 aaPredicted RBP8.63□□□□□ -1.03
TRAFD1-208ENST00000552890 TMEM165Q9HC07 324 aa8.63□□□□□ -1.03
TRAFD1-208ENST00000552890 VCX3AQ9NNX9 186 aa8.63□□□□□ -1.03
TRAFD1-208ENST00000552890 AASSQ9UDR5 926 aa8.63□□□□□ -1.03
TRAFD1-208ENST00000552890 TANC2Q9HCD6 1990 aa8.62□□□□□ -1.03
TRAFD1-208ENST00000552890 A8MXK9 166 aa8.62□□□□□ -1.03
TRAFD1-208ENST00000552890 TRAPPC2LH3BP13 241 aa8.62□□□□□ -1.03
TRAFD1-208ENST00000552890 NDUFB3O43676 98 aa8.62□□□□□ -1.03
TRAFD1-208ENST00000552890 ZNF780AO75290 641 aaPredicted RBP8.62□□□□□ -1.03
TRAFD1-208ENST00000552890 INMTO95050 263 aa8.62□□□□□ -1.03
TRAFD1-208ENST00000552890 CYB5R3P00387 301 aaPredicted RBP8.62□□□□□ -1.03
TRAFD1-208ENST00000552890 ALDOBP05062 364 aa8.62□□□□□ -1.03
TRAFD1-208ENST00000552890 PPIAL4GP0DN37 164 aa8.62□□□□□ -1.03
TRAFD1-208ENST00000552890 ATF1P18846 271 aa8.62□□□□□ -1.03
TRAFD1-208ENST00000552890 GLRA1P23415 457 aa8.62□□□□□ -1.03
TRAFD1-208ENST00000552890 CRHBPP24387 322 aa8.62□□□□□ -1.03
TRAFD1-208ENST00000552890 MPZP25189 248 aa8.62□□□□□ -1.03
TRAFD1-208ENST00000552890 PITPNBP48739 271 aa8.62□□□□□ -1.03
TRAFD1-208ENST00000552890 PSMD7P51665 324 aa8.62□□□□□ -1.03
TRAFD1-208ENST00000552890 BPIFB3P59826 476 aa8.62□□□□□ -1.03
TRAFD1-208ENST00000552890 GPR176Q14439 515 aa8.62□□□□□ -1.03
TRAFD1-208ENST00000552890 MPPED2Q15777 294 aa8.62□□□□□ -1.03
TRAFD1-208ENST00000552890 CHRFAM7AQ494W8 412 aa8.62□□□□□ -1.03
TRAFD1-208ENST00000552890 Q499Y3 187 aa8.62□□□□□ -1.03
TRAFD1-208ENST00000552890 CEP78Q5JTW2 689 aa8.62□□□□□ -1.03
TRAFD1-208ENST00000552890 AVPI1Q5T686 147 aa8.62□□□□□ -1.03
TRAFD1-208ENST00000552890 PRAMEF6Q5VXH4 476 aa8.62□□□□□ -1.03
TRAFD1-208ENST00000552890 DMKNQ6E0U4 476 aaPredicted RBP8.62□□□□□ -1.03
TRAFD1-208ENST00000552890 HAGHLQ6PII5 290 aaPredicted RBP8.62□□□□□ -1.03
TRAFD1-208ENST00000552890 CIARTQ8N365 385 aaPredicted RBP8.62□□□□□ -1.03
TRAFD1-208ENST00000552890 PPP1R35Q8TAP8 253 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms