RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 SLC18B1Q6NT16 456 aa4.27□□□□□ -1.73
HOXB3-213ENST00000552000 TSEN54Q7Z6J9 526 aaKnown RBP4.27□□□□□ -1.73
HOXB3-213ENST00000552000 DHDDSQ86SQ9 333 aa4.27□□□□□ -1.73
HOXB3-213ENST00000552000 SBSPONQ8IVN8 264 aa4.27□□□□□ -1.73
HOXB3-213ENST00000552000 OR6V1Q8N148 313 aa4.27□□□□□ -1.73
HOXB3-213ENST00000552000 EIF1ADQ8N9N8 165 aaKnown RBP4.27□□□□□ -1.73
HOXB3-213ENST00000552000 ZNRF1Q8ND25 227 aa4.27□□□□□ -1.73
HOXB3-213ENST00000552000 OR2AJ1Q8NGZ0 328 aa4.27□□□□□ -1.73
HOXB3-213ENST00000552000 OR10A6Q8NH74 314 aa4.27□□□□□ -1.73
HOXB3-213ENST00000552000 OR5K1Q8NHB7 308 aa4.27□□□□□ -1.73
HOXB3-213ENST00000552000 RASSF5Q8WWW0 418 aa4.27□□□□□ -1.73
HOXB3-213ENST00000552000 ZBTB9Q96C00 473 aa4.27□□□□□ -1.73
HOXB3-213ENST00000552000 FOXRED1Q96CU9 486 aaPredicted RBP4.27□□□□□ -1.73
HOXB3-213ENST00000552000 CGREF1Q99674 301 aa4.27□□□□□ -1.73
HOXB3-213ENST00000552000 POLR2J2Q9GZM3 115 aaKnown RBP4.27□□□□□ -1.73
HOXB3-213ENST00000552000 POLR2J3Q9H1A7 115 aaKnown RBP4.27□□□□□ -1.73
HOXB3-213ENST00000552000 PPP1R3EQ9H7J1 279 aa4.27□□□□□ -1.73
HOXB3-213ENST00000552000 NMNAT1Q9HAN9 279 aaPredicted RBP4.27□□□□□ -1.73
HOXB3-213ENST00000552000 PNRC2Q9NPJ4 139 aaKnown RBP4.27□□□□□ -1.73
HOXB3-213ENST00000552000 C19orf12Q9NSK7 152 aa4.27□□□□□ -1.73
HOXB3-213ENST00000552000 RHCGQ9UBD6 479 aa4.27□□□□□ -1.73
HOXB3-213ENST00000552000 BAG5Q9UL15 447 aa4.27□□□□□ -1.73
HOXB3-213ENST00000552000 IER3IP1Q9Y5U9 82 aa4.27□□□□□ -1.73
HOXB3-213ENST00000552000 SNX13Q9Y5W8 968 aa4.27□□□□□ -1.73
HOXB3-213ENST00000552000 IGLV1-36A0A0B4J1U3 117 aa4.26□□□□□ -1.73
HOXB3-213ENST00000552000 RBMY1BA6NDE4 496 aaKnown RBP4.26□□□□□ -1.73
HOXB3-213ENST00000552000 RBMY1EA6NEQ0 496 aaKnown RBP4.26□□□□□ -1.73
HOXB3-213ENST00000552000 SH2D7A6NKC9 451 aaPredicted RBP4.26□□□□□ -1.73
HOXB3-213ENST00000552000 OR2AT4A6NND4 320 aa4.26□□□□□ -1.73
HOXB3-213ENST00000552000 RGS16O15492 202 aaPredicted RBP4.26□□□□□ -1.73
HOXB3-213ENST00000552000 ARG1P05089 322 aa4.26□□□□□ -1.73
HOXB3-213ENST00000552000 LPLP06858 475 aa4.26□□□□□ -1.73
HOXB3-213ENST00000552000 RBMY1DP0C7P1 496 aaKnown RBP4.26□□□□□ -1.73
HOXB3-213ENST00000552000 CCL3L1P16619 93 aa4.26□□□□□ -1.73
HOXB3-213ENST00000552000 CRABP1P29762 137 aa4.26□□□□□ -1.73
HOXB3-213ENST00000552000 MYCNOSP40205 109 aa4.26□□□□□ -1.73
HOXB3-213ENST00000552000 MRPL19P49406 292 aaKnown RBP4.26□□□□□ -1.73
HOXB3-213ENST00000552000 PRKXP51817 358 aa4.26□□□□□ -1.73
HOXB3-213ENST00000552000 SLC25A1P53007 311 aa4.26□□□□□ -1.73
HOXB3-213ENST00000552000 RAB25P57735 213 aa4.26□□□□□ -1.73
HOXB3-213ENST00000552000 RPL23AP62750 156 aaKnown RBP4.26□□□□□ -1.73
HOXB3-213ENST00000552000 SPIBQ01892 262 aa4.26□□□□□ -1.73
HOXB3-213ENST00000552000 SLC34A1Q06495 639 aa4.26□□□□□ -1.73
HOXB3-213ENST00000552000 ST3GAL3Q11203 375 aa4.26□□□□□ -1.73
HOXB3-213ENST00000552000 SLC36A3Q495N2 470 aa4.26□□□□□ -1.73
HOXB3-213ENST00000552000 ABCA11PQ4W5N1 156 aa4.26□□□□□ -1.73
HOXB3-213ENST00000552000 CT83Q5H943 113 aa4.26□□□□□ -1.73
HOXB3-213ENST00000552000 GPR139Q6DWJ6 353 aa4.26□□□□□ -1.73
HOXB3-213ENST00000552000 DNM1P34Q6PK57 102 aa4.26□□□□□ -1.73
HOXB3-213ENST00000552000 TBPL2Q6SJ96 375 aa4.26□□□□□ -1.73
HOXB3-213ENST00000552000 ZNF730Q6ZMV8 503 aa4.26□□□□□ -1.73
HOXB3-213ENST00000552000 CCDC80Q76M96 950 aa4.26□□□□□ -1.73
HOXB3-213ENST00000552000 PIGWQ7Z7B1 504 aa4.26□□□□□ -1.73
HOXB3-213ENST00000552000 CPLX4Q7Z7G2 160 aa4.26□□□□□ -1.73
HOXB3-213ENST00000552000 ADCK1Q86TW2 530 aa4.26□□□□□ -1.73
HOXB3-213ENST00000552000 C11orf42Q8N5U0 333 aa4.26□□□□□ -1.73
HOXB3-213ENST00000552000 SLC26A10Q8NG04 563 aa4.26□□□□□ -1.73
HOXB3-213ENST00000552000 OR52H1Q8NGJ2 320 aa4.26□□□□□ -1.73
HOXB3-213ENST00000552000 OR10Z1Q8NGY1 313 aa4.26□□□□□ -1.73
HOXB3-213ENST00000552000 LZICQ8WZA0 190 aa4.26□□□□□ -1.73
HOXB3-213ENST00000552000 ANP32BQ92688 251 aaKnown RBP4.26□□□□□ -1.73
HOXB3-213ENST00000552000 RPL3LQ92901 407 aaKnown RBP4.26□□□□□ -1.73
HOXB3-213ENST00000552000 SPTSSAQ969W0 71 aa4.26□□□□□ -1.73
HOXB3-213ENST00000552000 MALSU1Q96EH3 234 aa4.26□□□□□ -1.73
HOXB3-213ENST00000552000 PRRC1Q96M27 445 aa4.26□□□□□ -1.73
HOXB3-213ENST00000552000 DUX3Q96PT4 197 aa4.26□□□□□ -1.73
HOXB3-213ENST00000552000 PAPOLGQ9BWT3 736 aaKnown RBP4.26□□□□□ -1.73
HOXB3-213ENST00000552000 NDEL1Q9GZM8 345 aa4.26□□□□□ -1.73
HOXB3-213ENST00000552000 KAT8Q9H7Z6 458 aaKnown RBP4.26□□□□□ -1.73
HOXB3-213ENST00000552000 NRIP3Q9NQ35 241 aa4.26□□□□□ -1.73
HOXB3-213ENST00000552000 USE1Q9NZ43 259 aa4.26□□□□□ -1.73
HOXB3-213ENST00000552000 NLKQ9UBE8 527 aa4.26□□□□□ -1.73
HOXB3-213ENST00000552000 CYB5R1Q9UHQ9 305 aa4.26□□□□□ -1.73
HOXB3-213ENST00000552000 A4GNTQ9UNA3 340 aa4.26□□□□□ -1.73
HOXB3-213ENST00000552000 B9D1Q9UPM9 204 aa4.26□□□□□ -1.73
HOXB3-213ENST00000552000 TBL2Q9Y4P3 447 aaKnown RBP4.26□□□□□ -1.73
HOXB3-213ENST00000552000 HILPDAQ9Y5L2 63 aa4.26□□□□□ -1.73
HOXB3-213ENST00000552000 DNAH6Q9C0G6 4158 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 IGKV1D-17A0A075B6S4 117 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 A0A087WUU8 490 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 hCG_1809904A0A1W2PP81 198 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 A0A1W2PPE2 198 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 A0A1W2PR64 198 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 A0A1W2PRV1 198 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 MEX3AA1L020 520 aaKnown RBP4.25□□□□□ -1.73
HOXB3-213ENST00000552000 PSMB11A5LHX3 300 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 ODF3BA8MYP8 253 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 J3KTA2 159 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 ZNF561-AS1K7EIQ3 104 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 TIPRLO75663 272 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 JTBO76095 146 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 NDUFB2O95178 105 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 LY86O95711 162 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 HLA-DQA2P01906 255 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 SNRNP70P08621 437 aaKnown RBP4.25□□□□□ -1.73
HOXB3-213ENST00000552000 TROVE2P10155 538 aaKnown RBP eCLIP4.25□□□□□ -1.73
HOXB3-213ENST00000552000 PSG2P11465 335 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 GLRA1P23415 457 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 CD24P25063 80 aa4.25□□□□□ -1.73
HOXB3-213ENST00000552000 OTX1P32242 354 aaPredicted RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms