RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 FABP3P05413 133 aa5.54□□□□□ -1.52
PRPF40B-214ENST00000551320 CALCBP10092 127 aa5.54□□□□□ -1.52
PRPF40B-214ENST00000551320 PSG2P11465 335 aa5.54□□□□□ -1.52
PRPF40B-214ENST00000551320 IGLL1P15814 213 aa5.54□□□□□ -1.52
PRPF40B-214ENST00000551320 EEF1B2P24534 225 aaKnown RBP5.54□□□□□ -1.52
PRPF40B-214ENST00000551320 CD24P25063 80 aa5.54□□□□□ -1.52
PRPF40B-214ENST00000551320 HSD11B1P28845 292 aa5.54□□□□□ -1.52
PRPF40B-214ENST00000551320 FMO3P31513 532 aa5.54□□□□□ -1.52
PRPF40B-214ENST00000551320 EFNB2P52799 333 aa5.54□□□□□ -1.52
PRPF40B-214ENST00000551320 ZNF273Q14593 569 aa5.54□□□□□ -1.52
PRPF40B-214ENST00000551320 HERPUD1Q15011 391 aa5.54□□□□□ -1.52
PRPF40B-214ENST00000551320 KCNJ8Q15842 424 aa5.54□□□□□ -1.52
PRPF40B-214ENST00000551320 LRRC10Q5BKY1 277 aa5.54□□□□□ -1.52
PRPF40B-214ENST00000551320 TMEM236Q5W0B7 351 aa5.54□□□□□ -1.52
PRPF40B-214ENST00000551320 ZNF770Q6IQ21 691 aaPredicted RBP5.54□□□□□ -1.52
PRPF40B-214ENST00000551320 C10orf99Q6UWK7 81 aa5.54□□□□□ -1.52
PRPF40B-214ENST00000551320 BAIAP2L2Q6UXY1 529 aa5.54□□□□□ -1.52
PRPF40B-214ENST00000551320 GDPGP1Q6ZNW5 385 aa5.54□□□□□ -1.52
PRPF40B-214ENST00000551320 Q6ZTK2 550 aa5.54□□□□□ -1.52
PRPF40B-214ENST00000551320 ARPINQ7Z6K5 226 aa5.54□□□□□ -1.52
PRPF40B-214ENST00000551320 TMEM179BQ7Z7N9 219 aa5.54□□□□□ -1.52
PRPF40B-214ENST00000551320 HS3ST5Q8IZT8 346 aa5.54□□□□□ -1.52
PRPF40B-214ENST00000551320 CD177Q8N6Q3 437 aa5.54□□□□□ -1.52
PRPF40B-214ENST00000551320 OR8B12Q8NGG6 310 aa5.54□□□□□ -1.52
PRPF40B-214ENST00000551320 OR51G2Q8NGK0 314 aa5.54□□□□□ -1.52
PRPF40B-214ENST00000551320 OR4C15Q8NGM1 316 aa5.54□□□□□ -1.52
PRPF40B-214ENST00000551320 ANGPTL6Q8NI99 470 aa5.54□□□□□ -1.52
PRPF40B-214ENST00000551320 THEM6Q8WUY1 208 aa5.54□□□□□ -1.52
PRPF40B-214ENST00000551320 SPSB4Q96A44 273 aa5.54□□□□□ -1.52
PRPF40B-214ENST00000551320 RBMXL1Q96E39 390 aaKnown RBP5.54□□□□□ -1.52
PRPF40B-214ENST00000551320 RAB3IPQ96QF0 476 aaPredicted RBP5.54□□□□□ -1.52
PRPF40B-214ENST00000551320 CITED2Q99967 270 aaPredicted RBP5.54□□□□□ -1.52
PRPF40B-214ENST00000551320 NIPSNAP1Q9BPW8 284 aa5.54□□□□□ -1.52
PRPF40B-214ENST00000551320 NMNAT2Q9BZQ4 307 aa5.54□□□□□ -1.52
PRPF40B-214ENST00000551320 MYLK2Q9H1R3 596 aa5.54□□□□□ -1.52
PRPF40B-214ENST00000551320 C14orf119Q9NWQ9 140 aa5.54□□□□□ -1.52
PRPF40B-214ENST00000551320 AURKAIP1Q9NWT8 199 aaPredicted RBP5.54□□□□□ -1.52
PRPF40B-214ENST00000551320 KAAG1Q9UBP8 84 aa5.54□□□□□ -1.52
PRPF40B-214ENST00000551320 LYVE1Q9Y5Y7 322 aa5.54□□□□□ -1.52
PRPF40B-214ENST00000551320 BTBD17A6NE02 478 aa5.53□□□□□ -1.52
PRPF40B-214ENST00000551320 OR2AT4A6NND4 320 aa5.53□□□□□ -1.52
PRPF40B-214ENST00000551320 ZNF732B4DXR9 585 aa5.53□□□□□ -1.52
PRPF40B-214ENST00000551320 ZNF878C9JN71 531 aa5.53□□□□□ -1.52
PRPF40B-214ENST00000551320 NDUFA2O43678 99 aa5.53□□□□□ -1.52
PRPF40B-214ENST00000551320 SYNGR1O43759 233 aa5.53□□□□□ -1.52
PRPF40B-214ENST00000551320 ECDO95905 644 aaPredicted RBP5.53□□□□□ -1.52
PRPF40B-214ENST00000551320 OPN1MWP04001 364 aa5.53□□□□□ -1.52
PRPF40B-214ENST00000551320 MRPL3P09001 348 aaKnown RBP5.53□□□□□ -1.52
PRPF40B-214ENST00000551320 ACAA1P09110 424 aaPredicted RBP5.53□□□□□ -1.52
PRPF40B-214ENST00000551320 H2BFMP0C1H6 154 aa5.53□□□□□ -1.52
PRPF40B-214ENST00000551320 OPN1MW2P0DN77 364 aa5.53□□□□□ -1.52
PRPF40B-214ENST00000551320 OPN1MW3P0DN78 364 aa5.53□□□□□ -1.52
PRPF40B-214ENST00000551320 MUC1P15941 1255 aaPredicted RBP5.53□□□□□ -1.52
PRPF40B-214ENST00000551320 PRKACGP22612 351 aa5.53□□□□□ -1.52
PRPF40B-214ENST00000551320 TGFBR2P37173 567 aa5.53□□□□□ -1.52
PRPF40B-214ENST00000551320 GNALP38405 381 aa5.53□□□□□ -1.52
PRPF40B-214ENST00000551320 OPRL1P41146 370 aa5.53□□□□□ -1.52
PRPF40B-214ENST00000551320 BPIFB3P59826 476 aa5.53□□□□□ -1.52
PRPF40B-214ENST00000551320 BLCAPP62952 87 aa5.53□□□□□ -1.52
PRPF40B-214ENST00000551320 STEAP3Q658P3 488 aa5.53□□□□□ -1.52
PRPF40B-214ENST00000551320 TMEM200BQ69YZ2 307 aa5.53□□□□□ -1.52
PRPF40B-214ENST00000551320 PLBD1Q6P4A8 553 aa5.53□□□□□ -1.52
PRPF40B-214ENST00000551320 PGM2L1Q6PCE3 622 aa5.53□□□□□ -1.52
PRPF40B-214ENST00000551320 CRIP3Q6Q6R5 217 aa5.53□□□□□ -1.52
PRPF40B-214ENST00000551320 HACD2Q6Y1H2 254 aa5.53□□□□□ -1.52
PRPF40B-214ENST00000551320 ZNF788Q6ZQV5 615 aa5.53□□□□□ -1.52
PRPF40B-214ENST00000551320 PLEKHG7Q6ZR37 379 aa5.53□□□□□ -1.52
PRPF40B-214ENST00000551320 MOB3CQ70IA8 216 aa5.53□□□□□ -1.52
PRPF40B-214ENST00000551320 SLC36A1Q7Z2H8 476 aa5.53□□□□□ -1.52
PRPF40B-214ENST00000551320 BCDIN3DQ7Z5W3 292 aaKnown RBP5.53□□□□□ -1.52
PRPF40B-214ENST00000551320 THNSL2Q86YJ6 484 aa5.53□□□□□ -1.52
PRPF40B-214ENST00000551320 TIGD4Q8IY51 512 aa5.53□□□□□ -1.52
PRPF40B-214ENST00000551320 C11orf42Q8N5U0 333 aa5.53□□□□□ -1.52
PRPF40B-214ENST00000551320 OR52L1Q8NGH7 329 aa5.53□□□□□ -1.52
PRPF40B-214ENST00000551320 OR2T4Q8NH00 348 aa5.53□□□□□ -1.52
PRPF40B-214ENST00000551320 OR5P3Q8WZ94 311 aa5.53□□□□□ -1.52
PRPF40B-214ENST00000551320 PHF21AQ96BD5 680 aa5.53□□□□□ -1.52
PRPF40B-214ENST00000551320 R3HDM4Q96D70 268 aa5.53□□□□□ -1.52
PRPF40B-214ENST00000551320 NSMCE2Q96MF7 247 aa5.53□□□□□ -1.52
PRPF40B-214ENST00000551320 ZNF702PQ9H963 129 aa5.53□□□□□ -1.52
PRPF40B-214ENST00000551320 VIPAS39Q9H9C1 493 aa5.53□□□□□ -1.52
PRPF40B-214ENST00000551320 SPAG4Q9NPE6 437 aa5.53□□□□□ -1.52
PRPF40B-214ENST00000551320 KRCC1Q9NPI7 259 aaPredicted RBP5.53□□□□□ -1.52
PRPF40B-214ENST00000551320 SERTAD4Q9NUC0 356 aa5.53□□□□□ -1.52
PRPF40B-214ENST00000551320 NLKQ9UBE8 527 aa5.53□□□□□ -1.52
PRPF40B-214ENST00000551320 CD300AQ9UGN4 299 aa5.53□□□□□ -1.52
PRPF40B-214ENST00000551320 SAMD4AQ9UPU9 718 aaKnown RBP5.53□□□□□ -1.52
PRPF40B-214ENST00000551320 FAM172BPA6NC97 362 aa5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 NKX6-3A6NJ46 265 aa5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 RFPL4AA6NLU0 287 aa5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 RFPL4AL1F8VTS6 287 aa5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 F8VVB4 439 aa5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 F8VWA3 439 aa5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 SIGLEC5O15389 551 aa5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 XRCC2O43543 280 aa5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 IDH3BO43837 385 aa5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 GMNNO75496 209 aa5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 CCNB2O95067 398 aa5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 FAHP16930 419 aa5.52□□□□□ -1.53
PRPF40B-214ENST00000551320 GLRA1P23415 457 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms