RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 CEACAM18A8MTB9 384 aa16.21■□□□□ 0.19
DDX54-207ENST00000550016 MYL12BO14950 172 aa16.21■□□□□ 0.19
DDX54-207ENST00000550016 LALBAP00709 142 aa16.21■□□□□ 0.19
DDX54-207ENST00000550016 CD80P33681 288 aa16.21■□□□□ 0.19
DDX54-207ENST00000550016 WNT4P56705 351 aa16.21■□□□□ 0.19
DDX54-207ENST00000550016 SLC35A2P78381 396 aa16.21■□□□□ 0.19
DDX54-207ENST00000550016 HOXA4Q00056 320 aaPredicted RBP16.21■□□□□ 0.19
DDX54-207ENST00000550016 SFRP4Q6FHJ7 346 aaPredicted RBP16.21■□□□□ 0.19
DDX54-207ENST00000550016 UTS2BQ765I0 119 aa16.21■□□□□ 0.19
DDX54-207ENST00000550016 ZNF573Q86YE8 665 aa16.21■□□□□ 0.19
DDX54-207ENST00000550016 C19orf18Q8NEA5 215 aa16.21■□□□□ 0.19
DDX54-207ENST00000550016 ZNF671Q8TAW3 534 aa16.21■□□□□ 0.19
DDX54-207ENST00000550016 PAK1IP1Q9NWT1 392 aaPredicted RBP16.21■□□□□ 0.19
DDX54-207ENST00000550016 SIRT4Q9Y6E7 314 aaPredicted RBP16.21■□□□□ 0.19
DDX54-207ENST00000550016 OOEPA6NGQ2 149 aa16.2■□□□□ 0.18
DDX54-207ENST00000550016 SRRM5B3KS81 715 aa16.2■□□□□ 0.18
DDX54-207ENST00000550016 F5H0A9 414 aaPredicted RBP16.2■□□□□ 0.18
DDX54-207ENST00000550016 C3orf80F5H4A9 247 aa16.2■□□□□ 0.18
DDX54-207ENST00000550016 MSMBP08118 114 aa16.2■□□□□ 0.18
DDX54-207ENST00000550016 WNT2P09544 360 aa16.2■□□□□ 0.18
DDX54-207ENST00000550016 EGR1P18146 543 aa16.2■□□□□ 0.18
DDX54-207ENST00000550016 CRHBPP24387 322 aa16.2■□□□□ 0.18
DDX54-207ENST00000550016 FUT6P51993 359 aa16.2■□□□□ 0.18
DDX54-207ENST00000550016 TAS2R43P59537 309 aa16.2■□□□□ 0.18
DDX54-207ENST00000550016 RBM48Q5RL73 367 aaKnown RBP16.2■□□□□ 0.18
DDX54-207ENST00000550016 DCDC5Q6ZRR9 648 aa16.2■□□□□ 0.18
DDX54-207ENST00000550016 OR51F2Q8NH61 342 aa16.2■□□□□ 0.18
DDX54-207ENST00000550016 AQP3Q92482 292 aa16.2■□□□□ 0.18
DDX54-207ENST00000550016 FAM230AA0A1W2PPH8 454 aa16.19■□□□□ 0.18
DDX54-207ENST00000550016 DENRO43583 198 aaKnown RBP16.19■□□□□ 0.18
DDX54-207ENST00000550016 NDUFA2O43678 99 aa16.19■□□□□ 0.18
DDX54-207ENST00000550016 PLPP2O43688 288 aa16.19■□□□□ 0.18
DDX54-207ENST00000550016 MUC1P15941 1255 aaPredicted RBP16.19■□□□□ 0.18
DDX54-207ENST00000550016 HAAOP46952 286 aa16.19■□□□□ 0.18
DDX54-207ENST00000550016 DVL1P1P54792 670 aaPredicted RBP16.19■□□□□ 0.18
DDX54-207ENST00000550016 CNN3Q15417 329 aaKnown RBP16.19■□□□□ 0.18
DDX54-207ENST00000550016 TEX36Q5VZQ5 186 aa16.19■□□□□ 0.18
DDX54-207ENST00000550016 DMKNQ6E0U4 476 aaPredicted RBP16.19■□□□□ 0.18
DDX54-207ENST00000550016 HAGHLQ6PII5 290 aaPredicted RBP16.19■□□□□ 0.18
DDX54-207ENST00000550016 TRMT10AQ8TBZ6 339 aaKnown RBP16.19■□□□□ 0.18
DDX54-207ENST00000550016 GPR148Q8TDV2 347 aa16.19■□□□□ 0.18
DDX54-207ENST00000550016 NPRL2Q8WTW4 380 aa16.19■□□□□ 0.18
DDX54-207ENST00000550016 SGCDQ92629 289 aa16.19■□□□□ 0.18
DDX54-207ENST00000550016 SMIM19Q96E16 107 aa16.19■□□□□ 0.18
DDX54-207ENST00000550016 MND1Q9BWT6 205 aa16.19■□□□□ 0.18
DDX54-207ENST00000550016 RASSF4Q9H2L5 321 aa16.19■□□□□ 0.18
DDX54-207ENST00000550016 LPAR2Q9HBW0 351 aa16.19■□□□□ 0.18
DDX54-207ENST00000550016 KCNS2Q9ULS6 477 aa16.19■□□□□ 0.18
DDX54-207ENST00000550016 DHDHQ9UQ10 334 aa16.19■□□□□ 0.18
DDX54-207ENST00000550016 SETD2Q9BYW2 2564 aaPredicted RBP16.18■□□□□ 0.18
DDX54-207ENST00000550016 FN1P02751 2386 aaKnown RBP16.18■□□□□ 0.18
DDX54-207ENST00000550016 NIPBLQ6KC79 2804 aaeCLIP16.18■□□□□ 0.18
DDX54-207ENST00000550016 TRAV20A0A0B4J274 112 aa16.18■□□□□ 0.18
DDX54-207ENST00000550016 INAFM1C9JVW0 142 aa16.18■□□□□ 0.18
DDX54-207ENST00000550016 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.18■□□□□ 0.18
DDX54-207ENST00000550016 RHBDL1O75783 438 aa16.18■□□□□ 0.18
DDX54-207ENST00000550016 RPS2P15880 293 aaKnown RBP16.18■□□□□ 0.18
DDX54-207ENST00000550016 ATF1P18846 271 aa16.18■□□□□ 0.18
DDX54-207ENST00000550016 MICBQ29980 383 aa16.18■□□□□ 0.18
DDX54-207ENST00000550016 LYPD2Q6UXB3 125 aa16.18■□□□□ 0.18
DDX54-207ENST00000550016 GLCCI1Q86VQ1 547 aa16.18■□□□□ 0.18
DDX54-207ENST00000550016 FAM90A1Q86YD7 464 aa16.18■□□□□ 0.18
DDX54-207ENST00000550016 ZFP41Q8N8Y5 198 aa16.18■□□□□ 0.18
DDX54-207ENST00000550016 DNAAF1Q8NEP3 725 aa16.18■□□□□ 0.18
DDX54-207ENST00000550016 TSEN15Q8WW01 171 aaKnown RBP16.18■□□□□ 0.18
DDX54-207ENST00000550016 RGP1Q92546 391 aaPredicted RBP16.18■□□□□ 0.18
DDX54-207ENST00000550016 GHSRQ92847 366 aa16.18■□□□□ 0.18
DDX54-207ENST00000550016 TMEM186Q96B77 213 aa16.18■□□□□ 0.18
DDX54-207ENST00000550016 NEIL1Q96FI4 390 aaPredicted RBP16.18■□□□□ 0.18
DDX54-207ENST00000550016 ZNF281Q9Y2X9 895 aa16.18■□□□□ 0.18
DDX54-207ENST00000550016 IGHV3OR15-7A0A075B7D8 119 aa16.17■□□□□ 0.18
DDX54-207ENST00000550016 IGKV1-9A0A0C4DH69 117 aa16.17■□□□□ 0.18
DDX54-207ENST00000550016 J3QT63 122 aa16.17■□□□□ 0.18
DDX54-207ENST00000550016 TNFRSF13BO14836 293 aaPredicted RBP16.17■□□□□ 0.18
DDX54-207ENST00000550016 AKR7A2O43488 359 aa16.17■□□□□ 0.18
DDX54-207ENST00000550016 RGS10O43665 173 aa16.17■□□□□ 0.18
DDX54-207ENST00000550016 FOXH1O75593 365 aa16.17■□□□□ 0.18
DDX54-207ENST00000550016 PRKACBP22694 351 aa16.17■□□□□ 0.18
DDX54-207ENST00000550016 IRF3Q14653 427 aa16.17■□□□□ 0.18
DDX54-207ENST00000550016 ESCO2Q56NI9 601 aa16.17■□□□□ 0.18
DDX54-207ENST00000550016 NLRC3Q7RTR2 1065 aa16.17■□□□□ 0.18
DDX54-207ENST00000550016 ANGPTL5Q86XS5 388 aa16.17■□□□□ 0.18
DDX54-207ENST00000550016 SERPINA12Q8IW75 414 aa16.17■□□□□ 0.18
DDX54-207ENST00000550016 PARP16Q8N5Y8 322 aa16.17■□□□□ 0.18
DDX54-207ENST00000550016 OR8B3Q8NGG8 313 aa16.17■□□□□ 0.18
DDX54-207ENST00000550016 OR5D14Q8NGL3 314 aa16.17■□□□□ 0.18
DDX54-207ENST00000550016 BORCS8Q96FH0 119 aa16.17■□□□□ 0.18
DDX54-207ENST00000550016 OR8B2Q96RD0 313 aa16.17■□□□□ 0.18
DDX54-207ENST00000550016 ZCCHC4Q9H5U6 513 aa16.17■□□□□ 0.18
DDX54-207ENST00000550016 HIF1ANQ9NWT6 349 aa16.17■□□□□ 0.18
DDX54-207ENST00000550016 TMEM160Q9NX00 188 aa16.17■□□□□ 0.18
DDX54-207ENST00000550016 BLOC1S6Q9UL45 172 aa16.17■□□□□ 0.18
DDX54-207ENST00000550016 LRCH1Q9Y2L9 728 aa16.17■□□□□ 0.18
DDX54-207ENST00000550016 POLDIP2Q9Y2S7 368 aa16.17■□□□□ 0.18
DDX54-207ENST00000550016 SYNGR1O43759 233 aa16.16■□□□□ 0.18
DDX54-207ENST00000550016 GYPAP02724 150 aa16.16■□□□□ 0.18
DDX54-207ENST00000550016 MT-ND2P03891 347 aa16.16■□□□□ 0.18
DDX54-207ENST00000550016 MPZP25189 248 aa16.16■□□□□ 0.18
DDX54-207ENST00000550016 ATP1B3P54709 279 aa16.16■□□□□ 0.18
DDX54-207ENST00000550016 GMFBP60983 142 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms