RNA–Protein interactions for RNA: ENST00000549963.1

GPN3-206, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 497 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-206ENST00000549963 BORCS8Q96FH0 119 aa12.55□□□□□ -0.4
GPN3-206ENST00000549963 PDCD1LG2Q9BQ51 273 aa12.55□□□□□ -0.4
GPN3-206ENST00000549963 TMEM246Q9BRR3 403 aa12.55□□□□□ -0.4
GPN3-206ENST00000549963 CDCA4Q9BXL8 241 aa12.55□□□□□ -0.4
GPN3-206ENST00000549963 CHST5Q9GZS9 411 aa12.55□□□□□ -0.4
GPN3-206ENST00000549963 DNAJB11Q9UBS4 358 aa12.55□□□□□ -0.4
GPN3-206ENST00000549963 POLDIP2Q9Y2S7 368 aa12.55□□□□□ -0.4
GPN3-206ENST00000549963 ZNF469Q96JG9 3925 aaPredicted RBP12.55□□□□□ -0.4
GPN3-206ENST00000549963 TEP1Q99973 2627 aaKnown RBP12.55□□□□□ -0.4
GPN3-206ENST00000549963 TRAV20A0A0B4J274 112 aa12.54□□□□□ -0.4
GPN3-206ENST00000549963 C3orf80F5H4A9 247 aa12.54□□□□□ -0.4
GPN3-206ENST00000549963 DENRO43583 198 aaKnown RBP12.54□□□□□ -0.4
GPN3-206ENST00000549963 RGS10O43665 173 aa12.54□□□□□ -0.4
GPN3-206ENST00000549963 FOXH1O75593 365 aa12.54□□□□□ -0.4
GPN3-206ENST00000549963 CYB5AP00167 134 aa12.54□□□□□ -0.4
GPN3-206ENST00000549963 MSMBP08118 114 aa12.54□□□□□ -0.4
GPN3-206ENST00000549963 RPS2P15880 293 aaKnown RBP12.54□□□□□ -0.4
GPN3-206ENST00000549963 ZNF16P17020 682 aaPredicted RBP12.54□□□□□ -0.4
GPN3-206ENST00000549963 HAAOP46952 286 aa12.54□□□□□ -0.4
GPN3-206ENST00000549963 ATP1B3P54709 279 aa12.54□□□□□ -0.4
GPN3-206ENST00000549963 DVL1P1P54792 670 aaPredicted RBP12.54□□□□□ -0.4
GPN3-206ENST00000549963 SLC35A2P78381 396 aa12.54□□□□□ -0.4
GPN3-206ENST00000549963 DMRTC1Q5HYR2 192 aa12.54□□□□□ -0.4
GPN3-206ENST00000549963 FAM201AQ5SY85 155 aa12.54□□□□□ -0.4
GPN3-206ENST00000549963 HAGHLQ6PII5 290 aaPredicted RBP12.54□□□□□ -0.4
GPN3-206ENST00000549963 GCSAMQ8N6F7 178 aa12.54□□□□□ -0.4
GPN3-206ENST00000549963 DNAAF1Q8NEP3 725 aa12.54□□□□□ -0.4
GPN3-206ENST00000549963 OR8B3Q8NGG8 313 aa12.54□□□□□ -0.4
GPN3-206ENST00000549963 SMIM19Q96E16 107 aa12.54□□□□□ -0.4
GPN3-206ENST00000549963 NEIL1Q96FI4 390 aaPredicted RBP12.54□□□□□ -0.4
GPN3-206ENST00000549963 OR8B2Q96RD0 313 aa12.54□□□□□ -0.4
GPN3-206ENST00000549963 CCDC90BQ9GZT6 254 aa12.54□□□□□ -0.4
GPN3-206ENST00000549963 DUSP21Q9H596 190 aa12.54□□□□□ -0.4
GPN3-206ENST00000549963 RASL12Q9NYN1 266 aa12.54□□□□□ -0.4
GPN3-206ENST00000549963 ZNF281Q9Y2X9 895 aa12.54□□□□□ -0.4
GPN3-206ENST00000549963 HIVEP2P31629 2446 aa12.53□□□□□ -0.4
GPN3-206ENST00000549963 ZANQ9Y493 2812 aa12.53□□□□□ -0.4
GPN3-206ENST00000549963 PQLC2LA1A4F0 135 aa12.53□□□□□ -0.4
GPN3-206ENST00000549963 CEACAM18A8MTB9 384 aa12.53□□□□□ -0.4
GPN3-206ENST00000549963 SRRM5B3KS81 715 aa12.53□□□□□ -0.4
GPN3-206ENST00000549963 FAM157AC9JC47 383 aa12.53□□□□□ -0.4
GPN3-206ENST00000549963 MAGEB3O15480 346 aa12.53□□□□□ -0.4
GPN3-206ENST00000549963 WNT2P09544 360 aa12.53□□□□□ -0.4
GPN3-206ENST00000549963 ATF1P18846 271 aa12.53□□□□□ -0.4
GPN3-206ENST00000549963 HNF1AP20823 631 aa12.53□□□□□ -0.4
GPN3-206ENST00000549963 GLRA1P23415 457 aa12.53□□□□□ -0.4
GPN3-206ENST00000549963 CRHBPP24387 322 aa12.53□□□□□ -0.4
GPN3-206ENST00000549963 CD80P33681 288 aa12.53□□□□□ -0.4
GPN3-206ENST00000549963 RBP2P50120 134 aa12.53□□□□□ -0.4
GPN3-206ENST00000549963 KRTAP1-1Q07627 177 aa12.53□□□□□ -0.4
GPN3-206ENST00000549963 UBE2V2Q15819 145 aa12.53□□□□□ -0.4
GPN3-206ENST00000549963 TRMT10AQ8TBZ6 339 aaKnown RBP12.53□□□□□ -0.4
GPN3-206ENST00000549963 NPRL2Q8WTW4 380 aa12.53□□□□□ -0.4
GPN3-206ENST00000549963 AQP3Q92482 292 aa12.53□□□□□ -0.4
GPN3-206ENST00000549963 GHSRQ92847 366 aa12.53□□□□□ -0.4
GPN3-206ENST00000549963 TMEM186Q96B77 213 aa12.53□□□□□ -0.4
GPN3-206ENST00000549963 TMIGD2Q96BF3 282 aa12.53□□□□□ -0.4
GPN3-206ENST00000549963 C12orf43Q96C57 262 aaKnown RBP12.53□□□□□ -0.4
GPN3-206ENST00000549963 ADAT3Q96EY9 351 aaPredicted RBP12.53□□□□□ -0.4
GPN3-206ENST00000549963 ZCCHC4Q9H5U6 513 aa12.53□□□□□ -0.4
GPN3-206ENST00000549963 METTL17Q9H7H0 456 aaPredicted RBP12.53□□□□□ -0.4
GPN3-206ENST00000549963 LRCH1Q9Y2L9 728 aa12.53□□□□□ -0.4
GPN3-206ENST00000549963 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.53□□□□□ -0.4
GPN3-206ENST00000549963 MALRD1Q5VYJ5 2156 aa12.52□□□□□ -0.4
GPN3-206ENST00000549963 J3QT63 122 aa12.52□□□□□ -0.41
GPN3-206ENST00000549963 PLPP2O43688 288 aa12.52□□□□□ -0.41
GPN3-206ENST00000549963 GATA3P23771 443 aa12.52□□□□□ -0.41
GPN3-206ENST00000549963 RBMXP38159 391 aaKnown RBP12.52□□□□□ -0.41
GPN3-206ENST00000549963 NPY4RP50391 375 aa12.52□□□□□ -0.41
GPN3-206ENST00000549963 MTCP1P56278 107 aa12.52□□□□□ -0.41
GPN3-206ENST00000549963 GNB2P62879 340 aa12.52□□□□□ -0.41
GPN3-206ENST00000549963 BDH1Q02338 343 aa12.52□□□□□ -0.41
GPN3-206ENST00000549963 HNRNPA0Q13151 305 aaKnown RBP12.52□□□□□ -0.41
GPN3-206ENST00000549963 SPHARQ15513 63 aa12.52□□□□□ -0.41
GPN3-206ENST00000549963 MED22Q15528 200 aa12.52□□□□□ -0.41
GPN3-206ENST00000549963 YIF1BQ5BJH7 314 aa12.52□□□□□ -0.41
GPN3-206ENST00000549963 TEX36Q5VZQ5 186 aa12.52□□□□□ -0.41
GPN3-206ENST00000549963 DMKNQ6E0U4 476 aaPredicted RBP12.52□□□□□ -0.41
GPN3-206ENST00000549963 LHFPL2Q6ZUX7 228 aa12.52□□□□□ -0.41
GPN3-206ENST00000549963 PRSS48Q7RTY5 328 aa12.52□□□□□ -0.41
GPN3-206ENST00000549963 MKXQ8IYA7 352 aa12.52□□□□□ -0.41
GPN3-206ENST00000549963 C19orf18Q8NEA5 215 aa12.52□□□□□ -0.41
GPN3-206ENST00000549963 OR51A4Q8NGJ6 313 aa12.52□□□□□ -0.41
GPN3-206ENST00000549963 OR10AC1Q8NH08 325 aa12.52□□□□□ -0.41
GPN3-206ENST00000549963 THRSPQ92748 146 aa12.52□□□□□ -0.41
GPN3-206ENST00000549963 SPSB1Q96BD6 273 aa12.52□□□□□ -0.41
GPN3-206ENST00000549963 CPNE2Q96FN4 548 aaPredicted RBP12.52□□□□□ -0.41
GPN3-206ENST00000549963 SSBP3Q9BWW4 388 aaPredicted RBP12.52□□□□□ -0.41
GPN3-206ENST00000549963 YTHDF1Q9BYJ9 559 aaKnown RBP12.52□□□□□ -0.41
GPN3-206ENST00000549963 PKIBQ9C010 78 aa12.52□□□□□ -0.41
GPN3-206ENST00000549963 LPAR2Q9HBW0 351 aa12.52□□□□□ -0.41
GPN3-206ENST00000549963 TMEM160Q9NX00 188 aa12.52□□□□□ -0.41
GPN3-206ENST00000549963 LPAR3Q9UBY5 353 aa12.52□□□□□ -0.41
GPN3-206ENST00000549963 TLN2Q9Y4G6 2542 aa12.52□□□□□ -0.41
GPN3-206ENST00000549963 AKR7A2O43488 359 aa12.51□□□□□ -0.41
GPN3-206ENST00000549963 ADAM20O43506 726 aa12.51□□□□□ -0.41
GPN3-206ENST00000549963 ALX3O95076 343 aa12.51□□□□□ -0.41
GPN3-206ENST00000549963 GYPAP02724 150 aa12.51□□□□□ -0.41
GPN3-206ENST00000549963 MT-ND2P03891 347 aa12.51□□□□□ -0.41
GPN3-206ENST00000549963 CD1AP06126 327 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms