RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 GMFBP60983 142 aa15.6■□□□□ 0.09
PRPF40B-206ENST00000547764 TMEM244Q5VVB8 128 aa15.6■□□□□ 0.09
PRPF40B-206ENST00000547764 WDR25Q64LD2 544 aaPredicted RBP15.6■□□□□ 0.09
PRPF40B-206ENST00000547764 C8orf59Q8N0T1 100 aaPredicted RBP15.6■□□□□ 0.09
PRPF40B-206ENST00000547764 JAM3Q9BX67 310 aa15.6■□□□□ 0.09
PRPF40B-206ENST00000547764 WDR13Q9H1Z4 485 aa15.6■□□□□ 0.09
PRPF40B-206ENST00000547764 OPN4Q9UHM6 478 aa15.6■□□□□ 0.09
PRPF40B-206ENST00000547764 INSIG2Q9Y5U4 225 aa15.6■□□□□ 0.09
PRPF40B-206ENST00000547764 MXRA5Q9NR99 2828 aa15.6■□□□□ 0.09
PRPF40B-206ENST00000547764 ISG15P05161 165 aa15.59■□□□□ 0.09
PRPF40B-206ENST00000547764 DCKP27707 260 aa15.59■□□□□ 0.09
PRPF40B-206ENST00000547764 PAX2Q02962 417 aa15.59■□□□□ 0.09
PRPF40B-206ENST00000547764 ALKBH1Q13686 389 aaKnown RBP15.59■□□□□ 0.09
PRPF40B-206ENST00000547764 HAGHLQ6PII5 290 aaPredicted RBP15.59■□□□□ 0.09
PRPF40B-206ENST00000547764 AQP3Q92482 292 aa15.59■□□□□ 0.09
PRPF40B-206ENST00000547764 TFAP2CQ92754 450 aa15.59■□□□□ 0.09
PRPF40B-206ENST00000547764 ERVK-18Q9QC07 812 aa15.59■□□□□ 0.09
PRPF40B-206ENST00000547764 PQLC2LA1A4F0 135 aa15.58■□□□□ 0.08
PRPF40B-206ENST00000547764 IRGMA1A4Y4 181 aa15.58■□□□□ 0.08
PRPF40B-206ENST00000547764 OR4C45A6NMZ5 311 aa15.58■□□□□ 0.08
PRPF40B-206ENST00000547764 E9PI62 339 aa15.58■□□□□ 0.08
PRPF40B-206ENST00000547764 ADRA2CP18825 462 aa15.58■□□□□ 0.08
PRPF40B-206ENST00000547764 NPY4RP50391 375 aa15.58■□□□□ 0.08
PRPF40B-206ENST00000547764 ETV1P50549 477 aa15.58■□□□□ 0.08
PRPF40B-206ENST00000547764 UBE2V2Q15819 145 aa15.58■□□□□ 0.08
PRPF40B-206ENST00000547764 LAIR2Q6ISS4 152 aa15.58■□□□□ 0.08
PRPF40B-206ENST00000547764 ZNF573Q86YE8 665 aa15.58■□□□□ 0.08
PRPF40B-206ENST00000547764 OR5T2Q8NGG2 359 aa15.58■□□□□ 0.08
PRPF40B-206ENST00000547764 ZNF671Q8TAW3 534 aa15.58■□□□□ 0.08
PRPF40B-206ENST00000547764 RAB40AQ8WXH6 277 aa15.58■□□□□ 0.08
PRPF40B-206ENST00000547764 DACT3Q96B18 629 aaPredicted RBP15.58■□□□□ 0.08
PRPF40B-206ENST00000547764 C12orf43Q96C57 262 aaKnown RBP15.58■□□□□ 0.08
PRPF40B-206ENST00000547764 C10orf35Q96D05 121 aa15.58■□□□□ 0.08
PRPF40B-206ENST00000547764 TECTBQ96PL2 329 aa15.58■□□□□ 0.08
PRPF40B-206ENST00000547764 CCL13Q99616 98 aa15.58■□□□□ 0.08
PRPF40B-206ENST00000547764 CHST5Q9GZS9 411 aa15.58■□□□□ 0.08
PRPF40B-206ENST00000547764 RASSF4Q9H2L5 321 aa15.58■□□□□ 0.08
PRPF40B-206ENST00000547764 SMURF1Q9HCE7 757 aa15.58■□□□□ 0.08
PRPF40B-206ENST00000547764 SNTG1Q9NSN8 517 aa15.58■□□□□ 0.08
PRPF40B-206ENST00000547764 KAAG1Q9UBP8 84 aa15.58■□□□□ 0.08
PRPF40B-206ENST00000547764 DNAJB11Q9UBS4 358 aa15.58■□□□□ 0.08
PRPF40B-206ENST00000547764 IGHV2-70DA0A0C4DH43 119 aa15.57■□□□□ 0.08
PRPF40B-206ENST00000547764 TMPRSS2O15393 492 aa15.57■□□□□ 0.08
PRPF40B-206ENST00000547764 FCN3O75636 299 aa15.57■□□□□ 0.08
PRPF40B-206ENST00000547764 GLRA1P23415 457 aa15.57■□□□□ 0.08
PRPF40B-206ENST00000547764 HAAOP46952 286 aa15.57■□□□□ 0.08
PRPF40B-206ENST00000547764 GBX2P52951 348 aaPredicted RBP15.57■□□□□ 0.08
PRPF40B-206ENST00000547764 PAX8Q06710 450 aa15.57■□□□□ 0.08
PRPF40B-206ENST00000547764 MRPL28Q13084 256 aaKnown RBP15.57■□□□□ 0.08
PRPF40B-206ENST00000547764 C1QL2Q7Z5L3 287 aa15.57■□□□□ 0.08
PRPF40B-206ENST00000547764 TEX29Q8N6K0 151 aa15.57■□□□□ 0.08
PRPF40B-206ENST00000547764 ZNF676Q8N7Q3 588 aa15.57■□□□□ 0.08
PRPF40B-206ENST00000547764 OR10AC1Q8NH08 325 aa15.57■□□□□ 0.08
PRPF40B-206ENST00000547764 TRMT10AQ8TBZ6 339 aaKnown RBP15.57■□□□□ 0.08
PRPF40B-206ENST00000547764 FBLIM1Q8WUP2 373 aa15.57■□□□□ 0.08
PRPF40B-206ENST00000547764 GGHQ92820 318 aa15.57■□□□□ 0.08
PRPF40B-206ENST00000547764 ADAT3Q96EY9 351 aaPredicted RBP15.57■□□□□ 0.08
PRPF40B-206ENST00000547764 METRNQ9UJH8 293 aa15.57■□□□□ 0.08
PRPF40B-206ENST00000547764 HHLA2Q9UM44 414 aa15.57■□□□□ 0.08
PRPF40B-206ENST00000547764 DIMT1Q9UNQ2 313 aaKnown RBP15.57■□□□□ 0.08
PRPF40B-206ENST00000547764 AUP1Q9Y679 476 aa15.57■□□□□ 0.08
PRPF40B-206ENST00000547764 A0A1B0GW55 424 aa15.56■□□□□ 0.08
PRPF40B-206ENST00000547764 FAM230AA0A1W2PPH8 454 aa15.56■□□□□ 0.08
PRPF40B-206ENST00000547764 C22orf46C9J442 243 aa15.56■□□□□ 0.08
PRPF40B-206ENST00000547764 J3QT63 122 aa15.56■□□□□ 0.08
PRPF40B-206ENST00000547764 DVL1O14640 695 aa15.56■□□□□ 0.08
PRPF40B-206ENST00000547764 GATBO75879 557 aaKnown RBP15.56■□□□□ 0.08
PRPF40B-206ENST00000547764 SERPINA3P01011 423 aa15.56■□□□□ 0.08
PRPF40B-206ENST00000547764 DUX4L2P0CJ85 424 aa15.56■□□□□ 0.08
PRPF40B-206ENST00000547764 DUX4L3P0CJ86 424 aa15.56■□□□□ 0.08
PRPF40B-206ENST00000547764 DUX4L4P0CJ87 422 aa15.56■□□□□ 0.08
PRPF40B-206ENST00000547764 DUX4L5P0CJ88 424 aa15.56■□□□□ 0.08
PRPF40B-206ENST00000547764 DUX4L6P0CJ89 424 aa15.56■□□□□ 0.08
PRPF40B-206ENST00000547764 DUX4L7P0CJ90 424 aa15.56■□□□□ 0.08
PRPF40B-206ENST00000547764 AMY2BP19961 511 aa15.56■□□□□ 0.08
PRPF40B-206ENST00000547764 AQP4P55087 323 aa15.56■□□□□ 0.08
PRPF40B-206ENST00000547764 ATPAF1Q5TC12 328 aaPredicted RBP15.56■□□□□ 0.08
PRPF40B-206ENST00000547764 STUMQ69YW2 141 aa15.56■□□□□ 0.08
PRPF40B-206ENST00000547764 DUX4L9Q6RFH8 374 aaPredicted RBP15.56■□□□□ 0.08
PRPF40B-206ENST00000547764 BTNL3Q6UXE8 466 aa15.56■□□□□ 0.08
PRPF40B-206ENST00000547764 OR51A4Q8NGJ6 313 aa15.56■□□□□ 0.08
PRPF40B-206ENST00000547764 NPRL2Q8WTW4 380 aa15.56■□□□□ 0.08
PRPF40B-206ENST00000547764 PP6455Q8WZ26 134 aa15.56■□□□□ 0.08
PRPF40B-206ENST00000547764 FGGYQ96C11 551 aa15.56■□□□□ 0.08
PRPF40B-206ENST00000547764 TMEM80Q96HE8 168 aa15.56■□□□□ 0.08
PRPF40B-206ENST00000547764 DUX4Q9UBX2 424 aa15.56■□□□□ 0.08
PRPF40B-206ENST00000547764 SLC7A11Q9UPY5 501 aa15.56■□□□□ 0.08
PRPF40B-206ENST00000547764 CAB39Q9Y376 341 aaPredicted RBP15.56■□□□□ 0.08
PRPF40B-206ENST00000547764 ATRQ13535 2644 aa15.56■□□□□ 0.08
PRPF40B-206ENST00000547764 KIR2DS1A0A191URI9 304 aa15.55■□□□□ 0.08
PRPF40B-206ENST00000547764 H0YHG0 523 aa15.55■□□□□ 0.08
PRPF40B-206ENST00000547764 H0YJX3 145 aa15.55■□□□□ 0.08
PRPF40B-206ENST00000547764 SYNGR1O43759 233 aa15.55■□□□□ 0.08
PRPF40B-206ENST00000547764 XPNPEP2O43895 674 aa15.55■□□□□ 0.08
PRPF40B-206ENST00000547764 ZFPL1O95159 310 aa15.55■□□□□ 0.08
PRPF40B-206ENST00000547764 TGM4P49221 684 aa15.55■□□□□ 0.08
PRPF40B-206ENST00000547764 GTF2A1P52655 376 aaPredicted RBP15.55■□□□□ 0.08
PRPF40B-206ENST00000547764 OR2G6Q5TZ20 316 aa15.55■□□□□ 0.08
PRPF40B-206ENST00000547764 SLC36A1Q7Z2H8 476 aa15.55■□□□□ 0.08
PRPF40B-206ENST00000547764 ANGPTL5Q86XS5 388 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms