RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 SERPINE3A8MV23 424 aa13.36□□□□□ -0.27
CNN3-207ENST00000545882 TLX3O43711 291 aaPredicted RBP13.36□□□□□ -0.27
CNN3-207ENST00000545882 KNG1P01042 644 aa13.36□□□□□ -0.27
CNN3-207ENST00000545882 DBHP09172 617 aa13.36□□□□□ -0.27
CNN3-207ENST00000545882 MUC1P15941 1255 aaPredicted RBP13.36□□□□□ -0.27
CNN3-207ENST00000545882 LPAR6P43657 344 aa13.36□□□□□ -0.27
CNN3-207ENST00000545882 S100A10P60903 97 aa13.36□□□□□ -0.27
CNN3-207ENST00000545882 OR2A2Q6IF42 318 aa13.36□□□□□ -0.27
CNN3-207ENST00000545882 LRRC18Q8N456 261 aa13.36□□□□□ -0.27
CNN3-207ENST00000545882 GJC3Q8NFK1 279 aa13.36□□□□□ -0.27
CNN3-207ENST00000545882 HLA-CQ95604 372 aa13.36□□□□□ -0.27
CNN3-207ENST00000545882 SAT2Q96F10 170 aaPredicted RBP13.36□□□□□ -0.27
CNN3-207ENST00000545882 NECAB3Q96P71 396 aaPredicted RBP13.36□□□□□ -0.27
CNN3-207ENST00000545882 NRIP2Q9BQI9 281 aa13.36□□□□□ -0.27
CNN3-207ENST00000545882 PIGQQ9BRB3 760 aa13.36□□□□□ -0.27
CNN3-207ENST00000545882 CNTNAP3Q9BZ76 1288 aa13.36□□□□□ -0.27
CNN3-207ENST00000545882 HRH4Q9H3N8 390 aa13.36□□□□□ -0.27
CNN3-207ENST00000545882 PIGLQ9Y2B2 252 aa13.36□□□□□ -0.27
CNN3-207ENST00000545882 PCDHGA1Q9Y5H4 931 aa13.36□□□□□ -0.27
CNN3-207ENST00000545882 CCDC85CA6NKD9 419 aa13.35□□□□□ -0.27
CNN3-207ENST00000545882 H7C2Y5 167 aa13.35□□□□□ -0.27
CNN3-207ENST00000545882 RRP8O43159 456 aaKnown RBP13.35□□□□□ -0.27
CNN3-207ENST00000545882 LRP3O75074 770 aa13.35□□□□□ -0.27
CNN3-207ENST00000545882 SFTPBP07988 381 aa13.35□□□□□ -0.27
CNN3-207ENST00000545882 TMEM268Q5VZI3 342 aa13.35□□□□□ -0.27
CNN3-207ENST00000545882 MRPL14Q6P1L8 145 aaKnown RBP13.35□□□□□ -0.27
CNN3-207ENST00000545882 TMEM123Q8N131 208 aa13.35□□□□□ -0.27
CNN3-207ENST00000545882 UCN2Q96RP3 112 aa13.35□□□□□ -0.27
CNN3-207ENST00000545882 LIME1Q9H400 295 aa13.35□□□□□ -0.27
CNN3-207ENST00000545882 RHOFQ9HBH0 211 aa13.35□□□□□ -0.27
CNN3-207ENST00000545882 RCC2Q9P258 522 aaKnown RBP13.35□□□□□ -0.27
CNN3-207ENST00000545882 IFNA2P01563 188 aa13.35□□□□□ -0.27
CNN3-207ENST00000545882 PRKACAP17612 351 aa13.35□□□□□ -0.27
CNN3-207ENST00000545882 CPT2P23786 658 aa13.35□□□□□ -0.27
CNN3-207ENST00000545882 FKBP2P26885 142 aaKnown RBP13.35□□□□□ -0.27
CNN3-207ENST00000545882 EPHA8P29322 1005 aaPredicted RBP13.35□□□□□ -0.27
CNN3-207ENST00000545882 CAV2P51636 162 aa13.35□□□□□ -0.27
CNN3-207ENST00000545882 PCOLCEQ15113 449 aa13.35□□□□□ -0.27
CNN3-207ENST00000545882 SNAI3Q3KNW1 292 aa13.35□□□□□ -0.27
CNN3-207ENST00000545882 FOXRED2Q8IWF2 684 aa13.35□□□□□ -0.27
CNN3-207ENST00000545882 SEMA6DQ8NFY4 1073 aa13.35□□□□□ -0.27
CNN3-207ENST00000545882 PP6455Q8WZ26 134 aa13.35□□□□□ -0.27
CNN3-207ENST00000545882 CCDC74BQ96LY2 380 aa13.35□□□□□ -0.27
CNN3-207ENST00000545882 Q96M66 194 aa13.35□□□□□ -0.27
CNN3-207ENST00000545882 PROK2Q9HC23 129 aa13.35□□□□□ -0.27
CNN3-207ENST00000545882 DECR2Q9NUI1 292 aa13.35□□□□□ -0.27
CNN3-207ENST00000545882 ZNF701Q9NV72 531 aaPredicted RBP13.35□□□□□ -0.27
CNN3-207ENST00000545882 ZNF581Q9P0T4 197 aa13.35□□□□□ -0.27
CNN3-207ENST00000545882 C14orf166Q9Y224 244 aaKnown RBP13.35□□□□□ -0.27
CNN3-207ENST00000545882 NCKAP5O14513 1909 aa13.34□□□□□ -0.27
CNN3-207ENST00000545882 GDF9O60383 454 aa13.34□□□□□ -0.27
CNN3-207ENST00000545882 IAH1Q2TAA2 248 aaPredicted RBP13.34□□□□□ -0.27
CNN3-207ENST00000545882 BTNL8Q6UX41 500 aa13.34□□□□□ -0.27
CNN3-207ENST00000545882 SGK3Q96BR1 496 aa13.34□□□□□ -0.27
CNN3-207ENST00000545882 FBXO17Q96EF6 278 aa13.34□□□□□ -0.27
CNN3-207ENST00000545882 ZNF837Q96EG3 531 aaPredicted RBP13.34□□□□□ -0.27
CNN3-207ENST00000545882 ZNF2Q9BSG1 426 aaPredicted RBP13.34□□□□□ -0.27
CNN3-207ENST00000545882 TAF9BQ9HBM6 251 aa13.34□□□□□ -0.27
CNN3-207ENST00000545882 C1orf123Q9NWV4 160 aa13.34□□□□□ -0.27
CNN3-207ENST00000545882 OCIAD1Q9NX40 245 aa13.34□□□□□ -0.27
CNN3-207ENST00000545882 C19orf25Q9UFG5 118 aaPredicted RBP13.34□□□□□ -0.27
CNN3-207ENST00000545882 ZNF175Q9Y473 711 aa13.34□□□□□ -0.27
CNN3-207ENST00000545882 TNRC6BQ9UPQ9 1833 aaKnown RBP13.34□□□□□ -0.27
CNN3-207ENST00000545882 ARID1AO14497 2285 aa13.33□□□□□ -0.27
CNN3-207ENST00000545882 TAAR5O14804 337 aa13.33□□□□□ -0.28
CNN3-207ENST00000545882 DHHO43323 396 aa13.33□□□□□ -0.28
CNN3-207ENST00000545882 SNAPINO95295 136 aa13.33□□□□□ -0.28
CNN3-207ENST00000545882 CTSDP07339 412 aaPredicted RBP13.33□□□□□ -0.28
CNN3-207ENST00000545882 PET100P0DJ07 73 aa13.33□□□□□ -0.28
CNN3-207ENST00000545882 PVALBP20472 110 aaPredicted RBP13.33□□□□□ -0.28
CNN3-207ENST00000545882 NME2P22392 152 aa13.33□□□□□ -0.28
CNN3-207ENST00000545882 GABRR1P24046 479 aa13.33□□□□□ -0.28
CNN3-207ENST00000545882 NFYBP25208 207 aa13.33□□□□□ -0.28
CNN3-207ENST00000545882 SULT1A2P50226 295 aa13.33□□□□□ -0.28
CNN3-207ENST00000545882 PPA1Q15181 289 aa13.33□□□□□ -0.28
CNN3-207ENST00000545882 RPUSD3Q6P087 351 aaKnown RBP13.33□□□□□ -0.28
CNN3-207ENST00000545882 GALNTL5Q7Z4T8 443 aa13.33□□□□□ -0.28
CNN3-207ENST00000545882 ZIC4Q8N9L1 334 aa13.33□□□□□ -0.28
CNN3-207ENST00000545882 MRPL24Q96A35 216 aaKnown RBP13.33□□□□□ -0.28
CNN3-207ENST00000545882 ELL3Q9HB65 397 aaPredicted RBP13.33□□□□□ -0.28
CNN3-207ENST00000545882 GPR173Q9NS66 373 aa13.33□□□□□ -0.28
CNN3-207ENST00000545882 TUBD1Q9UJT1 453 aa13.33□□□□□ -0.28
CNN3-207ENST00000545882 FOXD3Q9UJU5 478 aaPredicted RBP13.33□□□□□ -0.28
CNN3-207ENST00000545882 AMDHD2Q9Y303 409 aa13.33□□□□□ -0.28
CNN3-207ENST00000545882 CRYM-AS1A6NIL9 109 aa13.33□□□□□ -0.28
CNN3-207ENST00000545882 C9JQL5 133 aa13.33□□□□□ -0.28
CNN3-207ENST00000545882 RNASEK-C17orf49H0YIS7 233 aa13.33□□□□□ -0.28
CNN3-207ENST00000545882 M0R135 149 aa13.33□□□□□ -0.28
CNN3-207ENST00000545882 TP53I11O14683 189 aa13.33□□□□□ -0.28
CNN3-207ENST00000545882 ZIC3O60481 467 aa13.33□□□□□ -0.28
CNN3-207ENST00000545882 MED6O75586 246 aa13.33□□□□□ -0.28
CNN3-207ENST00000545882 CD5P06127 495 aa13.33□□□□□ -0.28
CNN3-207ENST00000545882 FCGR3AP08637 254 aa13.33□□□□□ -0.28
CNN3-207ENST00000545882 ACKR3P25106 362 aa13.33□□□□□ -0.28
CNN3-207ENST00000545882 RPL12P30050 165 aaKnown RBP13.33□□□□□ -0.28
CNN3-207ENST00000545882 RBMXP38159 391 aaKnown RBP13.33□□□□□ -0.28
CNN3-207ENST00000545882 ID4P47928 161 aa13.33□□□□□ -0.28
CNN3-207ENST00000545882 OR9K2Q8NGE7 335 aa13.33□□□□□ -0.28
CNN3-207ENST00000545882 NTNG2Q96CW9 530 aa13.33□□□□□ -0.28
CNN3-207ENST00000545882 CPNE2Q96FN4 548 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms