RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 UBTFL6P0CB48 400 aaPredicted RBP2.83□□□□□ -1.96
SNHG1-222ENST00000545308 GIMD1P0DJR0 217 aa2.83□□□□□ -1.96
SNHG1-222ENST00000545308 CT45A6P0DMU7 189 aa2.83□□□□□ -1.96
SNHG1-222ENST00000545308 CT45A5P0DMU8 189 aa2.83□□□□□ -1.96
SNHG1-222ENST00000545308 CT45A7P0DMV0 189 aa2.83□□□□□ -1.96
SNHG1-222ENST00000545308 NR2C1P13056 603 aa2.83□□□□□ -1.96
SNHG1-222ENST00000545308 HPGDP15428 266 aa2.83□□□□□ -1.96
SNHG1-222ENST00000545308 LONP1P36776 959 aaKnown RBP2.83□□□□□ -1.96
SNHG1-222ENST00000545308 CFHR2P36980 270 aa2.83□□□□□ -1.96
SNHG1-222ENST00000545308 CSKP41240 450 aa2.83□□□□□ -1.96
SNHG1-222ENST00000545308 PSMD8P48556 350 aa2.83□□□□□ -1.96
SNHG1-222ENST00000545308 NUP107P57740 925 aa2.83□□□□□ -1.96
SNHG1-222ENST00000545308 GNB2P62879 340 aa2.83□□□□□ -1.96
SNHG1-222ENST00000545308 CDC20Q12834 499 aa2.83□□□□□ -1.96
SNHG1-222ENST00000545308 DAZ2Q13117 558 aaKnown RBP2.83□□□□□ -1.96
SNHG1-222ENST00000545308 ART3Q13508 389 aa2.83□□□□□ -1.96
SNHG1-222ENST00000545308 OR7A5Q15622 319 aa2.83□□□□□ -1.96
SNHG1-222ENST00000545308 ZSCAN26Q16670 478 aa2.83□□□□□ -1.96
SNHG1-222ENST00000545308 DEFB133Q30KQ1 61 aa2.83□□□□□ -1.96
SNHG1-222ENST00000545308 ZBED5Q49AG3 693 aa2.83□□□□□ -1.96
SNHG1-222ENST00000545308 CT45A1Q5HYN5 189 aa2.83□□□□□ -1.96
SNHG1-222ENST00000545308 SPINK14Q6IE38 97 aa2.83□□□□□ -1.96
SNHG1-222ENST00000545308 FRMPD2BQ6IN97 320 aa2.83□□□□□ -1.96
SNHG1-222ENST00000545308 ASCL4Q6XD76 172 aa2.83□□□□□ -1.96
SNHG1-222ENST00000545308 SH2D6Q7Z4S9 175 aa2.83□□□□□ -1.96
SNHG1-222ENST00000545308 CBLN2Q8IUK8 224 aa2.83□□□□□ -1.96
SNHG1-222ENST00000545308 STK40Q8N2I9 435 aa2.83□□□□□ -1.96
SNHG1-222ENST00000545308 SUMF2Q8NBJ7 301 aa2.83□□□□□ -1.96
SNHG1-222ENST00000545308 INO80EQ8NBZ0 244 aaPredicted RBP2.83□□□□□ -1.96
SNHG1-222ENST00000545308 OR5T3Q8NGG3 340 aa2.83□□□□□ -1.96
SNHG1-222ENST00000545308 OR10G9Q8NGN4 311 aa2.83□□□□□ -1.96
SNHG1-222ENST00000545308 OR2A1Q8NGT9 310 aa2.83□□□□□ -1.96
SNHG1-222ENST00000545308 CT45A3Q8NHU0 189 aa2.83□□□□□ -1.96
SNHG1-222ENST00000545308 GIMAP1Q8WWP7 306 aa2.83□□□□□ -1.96
SNHG1-222ENST00000545308 FAM131CQ96AQ9 280 aa2.83□□□□□ -1.96
SNHG1-222ENST00000545308 CCDC127Q96BQ5 260 aa2.83□□□□□ -1.96
SNHG1-222ENST00000545308 AURKBQ96GD4 344 aaPredicted RBP2.83□□□□□ -1.96
SNHG1-222ENST00000545308 BMFQ96LC9 184 aa2.83□□□□□ -1.96
SNHG1-222ENST00000545308 LLPHQ9BRT6 129 aaKnown RBP2.83□□□□□ -1.96
SNHG1-222ENST00000545308 SIKE1Q9BRV8 207 aa2.83□□□□□ -1.96
SNHG1-222ENST00000545308 MRPL40Q9NQ50 206 aaKnown RBP2.83□□□□□ -1.96
SNHG1-222ENST00000545308 DAZ3Q9NR90 486 aaKnown RBP2.83□□□□□ -1.96
SNHG1-222ENST00000545308 FBXO8Q9NRD0 319 aa2.83□□□□□ -1.96
SNHG1-222ENST00000545308 CLN6Q9NWW5 311 aa2.83□□□□□ -1.96
SNHG1-222ENST00000545308 SLC39A1Q9NY26 324 aa2.83□□□□□ -1.96
SNHG1-222ENST00000545308 SHPKQ9UHJ6 478 aa2.83□□□□□ -1.96
SNHG1-222ENST00000545308 TP53TG5Q9Y2B4 290 aa2.83□□□□□ -1.96
SNHG1-222ENST00000545308 YARS2Q9Y2Z4 477 aaKnown RBP2.83□□□□□ -1.96
SNHG1-222ENST00000545308 HEBP2Q9Y5Z4 205 aa2.83□□□□□ -1.96
SNHG1-222ENST00000545308 TNRC6AQ8NDV7 1962 aaKnown RBP2.83□□□□□ -1.96
SNHG1-222ENST00000545308 NF1P21359 2839 aa2.83□□□□□ -1.96
SNHG1-222ENST00000545308 COL27A1Q8IZC6 1860 aaPredicted RBP2.82□□□□□ -1.96
SNHG1-222ENST00000545308 PIKFYVEQ9Y2I7 2098 aa2.82□□□□□ -1.96
SNHG1-222ENST00000545308 DCHS2Q6V1P9 2916 aa2.82□□□□□ -1.96
SNHG1-222ENST00000545308 A0A0J9YYE9 177 aa2.82□□□□□ -1.96
SNHG1-222ENST00000545308 CXorf51AA0A1B0GTR3 108 aa2.82□□□□□ -1.96
SNHG1-222ENST00000545308 A0A1W2PNU3 283 aaPredicted RBP2.82□□□□□ -1.96
SNHG1-222ENST00000545308 NCBP2LA6PVI3 153 aaKnown RBP2.82□□□□□ -1.96
SNHG1-222ENST00000545308 KPNA3O00505 521 aaPredicted RBP2.82□□□□□ -1.96
SNHG1-222ENST00000545308 PEX7O00628 323 aa2.82□□□□□ -1.96
SNHG1-222ENST00000545308 LSM8O95777 96 aaKnown RBP2.82□□□□□ -1.96
SNHG1-222ENST00000545308 TRBC1P01850 177 aa2.82□□□□□ -1.96
SNHG1-222ENST00000545308 HBE1P02100 147 aa2.82□□□□□ -1.96
SNHG1-222ENST00000545308 KRT16P08779 473 aa2.82□□□□□ -1.96
SNHG1-222ENST00000545308 TPM1P09493 284 aa2.82□□□□□ -1.96
SNHG1-222ENST00000545308 CD99P14209 185 aa2.82□□□□□ -1.96
SNHG1-222ENST00000545308 COX6B1P14854 86 aa2.82□□□□□ -1.96
SNHG1-222ENST00000545308 CNR1P21554 472 aa2.82□□□□□ -1.96
SNHG1-222ENST00000545308 AK4P27144 223 aaPredicted RBP2.82□□□□□ -1.96
SNHG1-222ENST00000545308 DRD3P35462 400 aa2.82□□□□□ -1.96
SNHG1-222ENST00000545308 NUP62P37198 522 aaPredicted RBP2.82□□□□□ -1.96
SNHG1-222ENST00000545308 RFC3P40938 356 aa2.82□□□□□ -1.96
SNHG1-222ENST00000545308 SERPINB8P50452 374 aa2.82□□□□□ -1.96
SNHG1-222ENST00000545308 YWHAEP62258 255 aaKnown RBP2.82□□□□□ -1.96
SNHG1-222ENST00000545308 LCN2P80188 198 aa2.82□□□□□ -1.96
SNHG1-222ENST00000545308 PON3Q15166 354 aa2.82□□□□□ -1.96
SNHG1-222ENST00000545308 FAM83EQ2M2I3 478 aa2.82□□□□□ -1.96
SNHG1-222ENST00000545308 RFX4Q33E94 735 aa2.82□□□□□ -1.96
SNHG1-222ENST00000545308 OTPQ5XKR4 325 aa2.82□□□□□ -1.96
SNHG1-222ENST00000545308 ZNF621Q6ZSS3 439 aa2.82□□□□□ -1.96
SNHG1-222ENST00000545308 CLEC20AQ6ZU45 233 aa2.82□□□□□ -1.96
SNHG1-222ENST00000545308 COX15Q7KZN9 410 aa2.82□□□□□ -1.96
SNHG1-222ENST00000545308 PEX26Q7Z412 305 aa2.82□□□□□ -1.96
SNHG1-222ENST00000545308 LYG1Q8N1E2 194 aa2.82□□□□□ -1.96
SNHG1-222ENST00000545308 OR4A15Q8NGL6 344 aa2.82□□□□□ -1.96
SNHG1-222ENST00000545308 LINC01006Q8NI28 216 aa2.82□□□□□ -1.96
SNHG1-222ENST00000545308 CD300LFQ8TDQ1 290 aa2.82□□□□□ -1.96
SNHG1-222ENST00000545308 MITD1Q8WV92 249 aa2.82□□□□□ -1.96
SNHG1-222ENST00000545308 PIH1D2Q8WWB5 315 aa2.82□□□□□ -1.96
SNHG1-222ENST00000545308 APH1AQ96BI3 265 aa2.82□□□□□ -1.96
SNHG1-222ENST00000545308 FAM3DQ96BQ1 224 aa2.82□□□□□ -1.96
SNHG1-222ENST00000545308 DNAJC1Q96KC8 554 aaKnown RBP2.82□□□□□ -1.96
SNHG1-222ENST00000545308 FOXC2Q99958 501 aa2.82□□□□□ -1.96
SNHG1-222ENST00000545308 YTHDF1Q9BYJ9 559 aaKnown RBP2.82□□□□□ -1.96
SNHG1-222ENST00000545308 MRPL37Q9BZE1 423 aaKnown RBP2.82□□□□□ -1.96
SNHG1-222ENST00000545308 NAA50Q9GZZ1 169 aaKnown RBP2.82□□□□□ -1.96
SNHG1-222ENST00000545308 XKR8Q9H6D3 395 aa2.82□□□□□ -1.96
SNHG1-222ENST00000545308 SLC25A37Q9NYZ2 338 aa2.82□□□□□ -1.96
SNHG1-222ENST00000545308 SAR1BQ9Y6B6 198 aa2.82□□□□□ -1.96
SNHG1-222ENST00000545308 U3KQA8 63 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms