RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 ZBTB25P24278 435 aa13.8□□□□□ -0.2
SNRNP70-203ENST00000544278 GMFBP60983 142 aa13.8□□□□□ -0.2
SNRNP70-203ENST00000544278 SLC25A53Q5H9E4 307 aa13.8□□□□□ -0.2
SNRNP70-203ENST00000544278 CRIP3Q6Q6R5 217 aa13.8□□□□□ -0.2
SNRNP70-203ENST00000544278 TOMM40LQ969M1 308 aa13.8□□□□□ -0.2
SNRNP70-203ENST00000544278 NABP1Q96AH0 204 aa13.8□□□□□ -0.2
SNRNP70-203ENST00000544278 SLC17A5Q9NRA2 495 aa13.8□□□□□ -0.2
SNRNP70-203ENST00000544278 PTTG3PQ9NZH4 202 aa13.8□□□□□ -0.2
SNRNP70-203ENST00000544278 EMC3Q9P0I2 261 aa13.8□□□□□ -0.2
SNRNP70-203ENST00000544278 SHPKQ9UHJ6 478 aa13.8□□□□□ -0.2
SNRNP70-203ENST00000544278 MCTS1Q9ULC4 181 aaKnown RBP13.8□□□□□ -0.2
SNRNP70-203ENST00000544278 DMXL2Q8TDJ6 3036 aa13.8□□□□□ -0.2
SNRNP70-203ENST00000544278 P04436 131 aa13.79□□□□□ -0.2
SNRNP70-203ENST00000544278 FGF2P09038 288 aa13.79□□□□□ -0.2
SNRNP70-203ENST00000544278 PTGFRP43088 359 aa13.79□□□□□ -0.2
SNRNP70-203ENST00000544278 MTCP1P56278 107 aa13.79□□□□□ -0.2
SNRNP70-203ENST00000544278 CARD18P57730 90 aa13.79□□□□□ -0.2
SNRNP70-203ENST00000544278 CEACAM16Q2WEN9 425 aa13.79□□□□□ -0.2
SNRNP70-203ENST00000544278 SP6Q3SY56 376 aa13.79□□□□□ -0.2
SNRNP70-203ENST00000544278 PPP1R32Q7Z5V6 425 aa13.79□□□□□ -0.2
SNRNP70-203ENST00000544278 OR5M8Q8NGP6 311 aa13.79□□□□□ -0.2
SNRNP70-203ENST00000544278 OR51F2Q8NH61 342 aa13.79□□□□□ -0.2
SNRNP70-203ENST00000544278 THRSPQ92748 146 aa13.79□□□□□ -0.2
SNRNP70-203ENST00000544278 SLC25A21Q9BQT8 299 aaPredicted RBP13.79□□□□□ -0.2
SNRNP70-203ENST00000544278 COA4Q9NYJ1 87 aa13.79□□□□□ -0.2
SNRNP70-203ENST00000544278 F5H0A9 414 aaPredicted RBP13.79□□□□□ -0.2
SNRNP70-203ENST00000544278 CD74P04233 296 aa13.79□□□□□ -0.2
SNRNP70-203ENST00000544278 HPNP05981 417 aa13.79□□□□□ -0.2
SNRNP70-203ENST00000544278 SFTPBP07988 381 aa13.79□□□□□ -0.2
SNRNP70-203ENST00000544278 NOVA1P51513 510 aaKnown RBP13.79□□□□□ -0.2
SNRNP70-203ENST00000544278 CLDN15P56746 228 aa13.79□□□□□ -0.2
SNRNP70-203ENST00000544278 FXYD4P59646 89 aa13.79□□□□□ -0.2
SNRNP70-203ENST00000544278 LYG2Q86SG7 212 aa13.79□□□□□ -0.2
SNRNP70-203ENST00000544278 CT55Q8WUE5 264 aa13.79□□□□□ -0.2
SNRNP70-203ENST00000544278 SGK3Q96BR1 496 aa13.79□□□□□ -0.2
SNRNP70-203ENST00000544278 PARP12Q9H0J9 701 aaKnown RBP13.79□□□□□ -0.2
SNRNP70-203ENST00000544278 NELFAQ9H3P2 528 aa13.79□□□□□ -0.2
SNRNP70-203ENST00000544278 C5orf66Q9H5L9 145 aa13.79□□□□□ -0.2
SNRNP70-203ENST00000544278 LOXL2Q9Y4K0 774 aa13.79□□□□□ -0.2
SNRNP70-203ENST00000544278 SPP1P10451 314 aa13.79□□□□□ -0.2
SNRNP70-203ENST00000544278 EIF1P41567 113 aaKnown RBP13.79□□□□□ -0.2
SNRNP70-203ENST00000544278 RAB13P51153 203 aa13.79□□□□□ -0.2
SNRNP70-203ENST00000544278 S100A10P60903 97 aa13.79□□□□□ -0.2
SNRNP70-203ENST00000544278 H3F3AP84243 136 aa13.79□□□□□ -0.2
SNRNP70-203ENST00000544278 C1orf210Q8IVY1 113 aa13.79□□□□□ -0.2
SNRNP70-203ENST00000544278 TMEM185AQ8NFB2 350 aa13.79□□□□□ -0.2
SNRNP70-203ENST00000544278 OR10D3Q8NH80 312 aa13.79□□□□□ -0.2
SNRNP70-203ENST00000544278 RNF138Q8WVD3 245 aa13.79□□□□□ -0.2
SNRNP70-203ENST00000544278 PRRT1Q99946 306 aa13.79□□□□□ -0.2
SNRNP70-203ENST00000544278 OR10A2Q9H208 303 aa13.79□□□□□ -0.2
SNRNP70-203ENST00000544278 PADI1Q9ULC6 663 aa13.79□□□□□ -0.2
SNRNP70-203ENST00000544278 SMG1Q96Q15 3661 aaKnown RBP13.78□□□□□ -0.2
SNRNP70-203ENST00000544278 MSGN1A6NI15 193 aa13.78□□□□□ -0.2
SNRNP70-203ENST00000544278 HTR5AP47898 357 aa13.78□□□□□ -0.2
SNRNP70-203ENST00000544278 MECP2P51608 486 aaKnown RBP13.78□□□□□ -0.2
SNRNP70-203ENST00000544278 SCAND1P57086 179 aa13.78□□□□□ -0.2
SNRNP70-203ENST00000544278 ZXDAP98168 799 aa13.78□□□□□ -0.2
SNRNP70-203ENST00000544278 IL11RAQ14626 422 aa13.78□□□□□ -0.2
SNRNP70-203ENST00000544278 PIGYQ3MUY2 71 aa13.78□□□□□ -0.2
SNRNP70-203ENST00000544278 GJC3Q8NFK1 279 aa13.78□□□□□ -0.2
SNRNP70-203ENST00000544278 FOXRED1Q96CU9 486 aaPredicted RBP13.78□□□□□ -0.2
SNRNP70-203ENST00000544278 PIGQQ9BRB3 760 aa13.78□□□□□ -0.2
SNRNP70-203ENST00000544278 SLC26A1Q9H2B4 701 aa13.78□□□□□ -0.2
SNRNP70-203ENST00000544278 P4HTMQ9NXG6 502 aa13.78□□□□□ -0.2
SNRNP70-203ENST00000544278 FOXJ2Q9P0K8 574 aa13.78□□□□□ -0.2
SNRNP70-203ENST00000544278 TCFL5Q9UL49 500 aa13.78□□□□□ -0.2
SNRNP70-203ENST00000544278 RFPL4AA6NLU0 287 aa13.78□□□□□ -0.2
SNRNP70-203ENST00000544278 DHRS7CA6NNS2 312 aa13.78□□□□□ -0.2
SNRNP70-203ENST00000544278 RFPL4AL1F8VTS6 287 aa13.78□□□□□ -0.2
SNRNP70-203ENST00000544278 EIF3GO75821 320 aaKnown RBP eCLIP13.78□□□□□ -0.2
SNRNP70-203ENST00000544278 DSCR4P56555 118 aaPredicted RBP13.78□□□□□ -0.2
SNRNP70-203ENST00000544278 GUCA2BQ16661 112 aa13.78□□□□□ -0.2
SNRNP70-203ENST00000544278 AAED1Q7RTV5 226 aa13.78□□□□□ -0.2
SNRNP70-203ENST00000544278 CCDC36Q8IYA8 594 aa13.78□□□□□ -0.2
SNRNP70-203ENST00000544278 OR5H2Q8NGV7 314 aa13.78□□□□□ -0.2
SNRNP70-203ENST00000544278 OR13G1Q8NGZ3 307 aa13.78□□□□□ -0.2
SNRNP70-203ENST00000544278 PAQR8Q8TEZ7 354 aa13.78□□□□□ -0.2
SNRNP70-203ENST00000544278 TMEM230Q96A57 120 aa13.78□□□□□ -0.2
SNRNP70-203ENST00000544278 THOC3Q96J01 351 aaKnown RBP13.78□□□□□ -0.2
SNRNP70-203ENST00000544278 ANGPTL4Q9BY76 406 aa13.78□□□□□ -0.2
SNRNP70-203ENST00000544278 NOSIPQ9Y314 301 aaKnown RBP13.78□□□□□ -0.2
SNRNP70-203ENST00000544278 CSAG2Q9Y5P2 127 aa13.78□□□□□ -0.2
SNRNP70-203ENST00000544278 DUSP1P28562 367 aa13.77□□□□□ -0.2
SNRNP70-203ENST00000544278 MLF1P58340 268 aa13.77□□□□□ -0.2
SNRNP70-203ENST00000544278 ANKRD55Q3KP44 614 aa13.77□□□□□ -0.2
SNRNP70-203ENST00000544278 ACER2Q5QJU3 275 aa13.77□□□□□ -0.2
SNRNP70-203ENST00000544278 RAB12Q6IQ22 244 aa13.77□□□□□ -0.2
SNRNP70-203ENST00000544278 DOK3Q7L591 496 aa13.77□□□□□ -0.2
SNRNP70-203ENST00000544278 KCNG3Q8TAE7 436 aa13.77□□□□□ -0.2
SNRNP70-203ENST00000544278 SCARB1Q8WTV0 552 aa13.77□□□□□ -0.2
SNRNP70-203ENST00000544278 DCUN1D4Q92564 292 aa13.77□□□□□ -0.2
SNRNP70-203ENST00000544278 TMEM231Q9H6L2 316 aa13.77□□□□□ -0.2
SNRNP70-203ENST00000544278 CRIM1Q9NZV1 1036 aa13.77□□□□□ -0.2
SNRNP70-203ENST00000544278 PCNX1Q96RV3 2341 aa13.77□□□□□ -0.2
SNRNP70-203ENST00000544278 GTF3C1Q12789 2109 aa13.77□□□□□ -0.2
SNRNP70-203ENST00000544278 IGKV1-27A0A075B6S5 117 aa13.77□□□□□ -0.21
SNRNP70-203ENST00000544278 RNF222A6NCQ9 220 aa13.77□□□□□ -0.21
SNRNP70-203ENST00000544278 ZNF587BE7ETH6 402 aa13.77□□□□□ -0.21
SNRNP70-203ENST00000544278 JMJD7P0C870 316 aa13.77□□□□□ -0.21
SNRNP70-203ENST00000544278 SNRPEP62304 92 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms