RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 TMIGD2Q96BF3 282 aa19.27■□□□□ 0.68
CHFR-222ENST00000544093 RNFT2Q96EX2 444 aa19.27■□□□□ 0.68
CHFR-222ENST00000544093 WDR13Q9H1Z4 485 aa19.27■□□□□ 0.68
CHFR-222ENST00000544093 RASSF4Q9H2L5 321 aa19.27■□□□□ 0.68
CHFR-222ENST00000544093 RPUSD1Q9UJJ7 312 aaKnown RBP19.27■□□□□ 0.68
CHFR-222ENST00000544093 GNG8Q9UK08 70 aa19.27■□□□□ 0.68
CHFR-222ENST00000544093 POLDIP2Q9Y2S7 368 aa19.27■□□□□ 0.68
CHFR-222ENST00000544093 SYT7O43581 403 aa19.26■□□□□ 0.67
CHFR-222ENST00000544093 UBCP0CG48 685 aaKnown RBP19.26■□□□□ 0.67
CHFR-222ENST00000544093 ISL1P61371 349 aa19.26■□□□□ 0.67
CHFR-222ENST00000544093 IL13RA1P78552 427 aa19.26■□□□□ 0.67
CHFR-222ENST00000544093 PDCD1Q15116 288 aa19.26■□□□□ 0.67
CHFR-222ENST00000544093 HAGHLQ6PII5 290 aaPredicted RBP19.26■□□□□ 0.67
CHFR-222ENST00000544093 FAM216BQ8N7L0 139 aa19.26■□□□□ 0.67
CHFR-222ENST00000544093 ZDHHC22Q8N966 263 aa19.26■□□□□ 0.67
CHFR-222ENST00000544093 ANGPTL6Q8NI99 470 aa19.26■□□□□ 0.67
CHFR-222ENST00000544093 C10orf35Q96D05 121 aa19.26■□□□□ 0.67
CHFR-222ENST00000544093 WDFY2Q96P53 400 aa19.26■□□□□ 0.67
CHFR-222ENST00000544093 MBOAT4Q96T53 435 aa19.26■□□□□ 0.67
CHFR-222ENST00000544093 PCGF1Q9BSM1 259 aa19.26■□□□□ 0.67
CHFR-222ENST00000544093 CNTD2Q9H8S5 307 aa19.26■□□□□ 0.67
CHFR-222ENST00000544093 DAPL1A0PJW8 107 aa19.25■□□□□ 0.67
CHFR-222ENST00000544093 ANKRD61A6NGH8 418 aa19.25■□□□□ 0.67
CHFR-222ENST00000544093 OR2AT4A6NND4 320 aa19.25■□□□□ 0.67
CHFR-222ENST00000544093 J3QRE1 110 aa19.25■□□□□ 0.67
CHFR-222ENST00000544093 RHBDL1O75783 438 aa19.25■□□□□ 0.67
CHFR-222ENST00000544093 GMFBP60983 142 aa19.25■□□□□ 0.67
CHFR-222ENST00000544093 ACTA2P62736 377 aa19.25■□□□□ 0.67
CHFR-222ENST00000544093 ACTG2P63267 376 aa19.25■□□□□ 0.67
CHFR-222ENST00000544093 ZNF85Q03923 595 aa19.25■□□□□ 0.67
CHFR-222ENST00000544093 ZSCAN26Q16670 478 aa19.25■□□□□ 0.67
CHFR-222ENST00000544093 CDONQ4KMG0 1287 aa19.25■□□□□ 0.67
CHFR-222ENST00000544093 ZNF788Q6ZQV5 615 aa19.25■□□□□ 0.67
CHFR-222ENST00000544093 EGFL6Q8IUX8 553 aa19.25■□□□□ 0.67
CHFR-222ENST00000544093 ACBD7Q8N6N7 88 aa19.25■□□□□ 0.67
CHFR-222ENST00000544093 RDH12Q96NR8 316 aa19.25■□□□□ 0.67
CHFR-222ENST00000544093 SNTG1Q9NSN8 517 aa19.25■□□□□ 0.67
CHFR-222ENST00000544093 SLC7A11Q9UPY5 501 aa19.25■□□□□ 0.67
CHFR-222ENST00000544093 KPTNQ9Y664 436 aa19.25■□□□□ 0.67
CHFR-222ENST00000544093 J3QT63 122 aa19.24■□□□□ 0.67
CHFR-222ENST00000544093 GATBO75879 557 aaKnown RBP19.24■□□□□ 0.67
CHFR-222ENST00000544093 MMP9P14780 707 aa19.24■□□□□ 0.67
CHFR-222ENST00000544093 HAAOP46952 286 aa19.24■□□□□ 0.67
CHFR-222ENST00000544093 UBA52P62987 128 aaKnown RBP19.24■□□□□ 0.67
CHFR-222ENST00000544093 IKZF1Q13422 519 aa19.24■□□□□ 0.67
CHFR-222ENST00000544093 SMIM21Q3B7S5 101 aa19.24■□□□□ 0.67
CHFR-222ENST00000544093 CMTM4Q8IZR5 234 aa19.24■□□□□ 0.67
CHFR-222ENST00000544093 LY6G5BQ8NDX9 201 aa19.24■□□□□ 0.67
CHFR-222ENST00000544093 OR5T2Q8NGG2 359 aa19.24■□□□□ 0.67
CHFR-222ENST00000544093 SEH1LQ96EE3 360 aa19.24■□□□□ 0.67
CHFR-222ENST00000544093 ESM1Q9NQ30 184 aa19.24■□□□□ 0.67
CHFR-222ENST00000544093 GPR173Q9NS66 373 aa19.24■□□□□ 0.67
CHFR-222ENST00000544093 ACOXLQ9NUZ1 547 aa19.24■□□□□ 0.67
CHFR-222ENST00000544093 EXOGQ9Y2C4 368 aaKnown RBP19.24■□□□□ 0.67
CHFR-222ENST00000544093 LOC100130705A0A1B0GUX0 176 aa19.23■□□□□ 0.67
CHFR-222ENST00000544093 PQLC2LA1A4F0 135 aa19.23■□□□□ 0.67
CHFR-222ENST00000544093 CLDN34H7C241 214 aa19.23■□□□□ 0.67
CHFR-222ENST00000544093 SIGLEC5O15389 551 aa19.23■□□□□ 0.67
CHFR-222ENST00000544093 SLC16A6O15403 523 aa19.23■□□□□ 0.67
CHFR-222ENST00000544093 NOS1APO75052 506 aaPredicted RBP19.23■□□□□ 0.67
CHFR-222ENST00000544093 FCN3O75636 299 aa19.23■□□□□ 0.67
CHFR-222ENST00000544093 BAG2O95816 211 aa19.23■□□□□ 0.67
CHFR-222ENST00000544093 SERPINA3P01011 423 aa19.23■□□□□ 0.67
CHFR-222ENST00000544093 ACAA1P09110 424 aaPredicted RBP19.23■□□□□ 0.67
CHFR-222ENST00000544093 GABRB1P18505 474 aa19.23■□□□□ 0.67
CHFR-222ENST00000544093 PRTN3P24158 256 aa19.23■□□□□ 0.67
CHFR-222ENST00000544093 COMPP49747 757 aaPredicted RBP19.23■□□□□ 0.67
CHFR-222ENST00000544093 CAV3P56539 151 aa19.23■□□□□ 0.67
CHFR-222ENST00000544093 BAMBIQ13145 260 aa19.23■□□□□ 0.67
CHFR-222ENST00000544093 TP53I3Q53FA7 332 aa19.23■□□□□ 0.67
CHFR-222ENST00000544093 TMEM244Q5VVB8 128 aa19.23■□□□□ 0.67
CHFR-222ENST00000544093 ENTHD1Q8IYW4 607 aa19.23■□□□□ 0.67
CHFR-222ENST00000544093 BCL6BQ8N143 479 aaPredicted RBP19.23■□□□□ 0.67
CHFR-222ENST00000544093 KIR3DL3Q8N743 410 aa19.23■□□□□ 0.67
CHFR-222ENST00000544093 POC1AQ8NBT0 407 aa19.23■□□□□ 0.67
CHFR-222ENST00000544093 GCDHQ92947 438 aaPredicted RBP19.23■□□□□ 0.67
CHFR-222ENST00000544093 SLC29A1Q99808 456 aa19.23■□□□□ 0.67
CHFR-222ENST00000544093 SIRPDQ9H106 197 aa19.23■□□□□ 0.67
CHFR-222ENST00000544093 C8orf4Q9NR00 106 aa19.23■□□□□ 0.67
CHFR-222ENST00000544093 SLC25A10Q9UBX3 287 aaPredicted RBP19.23■□□□□ 0.67
CHFR-222ENST00000544093 IGHV3OR16-10A0A075B7F0 116 aa19.22■□□□□ 0.67
CHFR-222ENST00000544093 TMEM89A2RUT3 159 aa19.22■□□□□ 0.67
CHFR-222ENST00000544093 RPSAP08865 295 aaKnown RBP19.22■□□□□ 0.67
CHFR-222ENST00000544093 AMY2BP19961 511 aa19.22■□□□□ 0.67
CHFR-222ENST00000544093 ODF4Q2M2E3 257 aa19.22■□□□□ 0.67
CHFR-222ENST00000544093 FDX2Q6P4F2 183 aa19.22■□□□□ 0.67
CHFR-222ENST00000544093 C12orf54Q6X4T0 127 aa19.22■□□□□ 0.67
CHFR-222ENST00000544093 RHOXF1Q8NHV9 184 aa19.22■□□□□ 0.67
CHFR-222ENST00000544093 C8orf46Q8TAG6 207 aa19.22■□□□□ 0.67
CHFR-222ENST00000544093 GATAD2BQ8WXI9 593 aa19.22■□□□□ 0.67
CHFR-222ENST00000544093 PP6455Q8WZ26 134 aa19.22■□□□□ 0.67
CHFR-222ENST00000544093 SLC25A28Q96A46 364 aa19.22■□□□□ 0.67
CHFR-222ENST00000544093 GAFA1Q96PS6 74 aa19.22■□□□□ 0.67
CHFR-222ENST00000544093 TBX15Q96SF7 602 aa19.22■□□□□ 0.67
CHFR-222ENST00000544093 DCTN5Q9BTE1 182 aa19.22■□□□□ 0.67
CHFR-222ENST00000544093 PKIBQ9C010 78 aa19.22■□□□□ 0.67
CHFR-222ENST00000544093 CHST5Q9GZS9 411 aa19.22■□□□□ 0.67
CHFR-222ENST00000544093 INPP5EQ9NRR6 644 aa19.22■□□□□ 0.67
CHFR-222ENST00000544093 A0A1B0GW55 424 aa19.21■□□□□ 0.67
CHFR-222ENST00000544093 DNAJC9-AS1A6NH13 148 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms