RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 KCTD16Q68DU8 428 aa2.5□□□□□ -2.01
SCFD1-207ENST00000544052 DEFB106AQ8N104 65 aa2.5□□□□□ -2.01
SCFD1-207ENST00000544052 ARHGAP18Q8N392 663 aa2.5□□□□□ -2.01
SCFD1-207ENST00000544052 MCOLN3Q8TDD5 553 aa2.5□□□□□ -2.01
SCFD1-207ENST00000544052 FBXL12Q9NXK8 326 aa2.5□□□□□ -2.01
SCFD1-207ENST00000544052 RPS6KB2Q9UBS0 482 aa2.5□□□□□ -2.01
SCFD1-207ENST00000544052 AHCTF1Q8WYP5 2266 aa2.5□□□□□ -2.01
SCFD1-207ENST00000544052 RELNP78509 3460 aa2.5□□□□□ -2.01
SCFD1-207ENST00000544052 MYO18BQ8IUG5 2567 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 A0A0B4J2A0 478 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 A0A0D9SEW6 157 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 KBTBD11-OT1A0A1B0GTJ5 212 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 A0A1B0GVY2 172 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 KRTAP9-6A8MVA2 160 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 ZNF879B4DU55 563 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 ZMPSTE24O75844 475 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 SRP72O76094 671 aaKnown RBP2.49□□□□□ -2.01
SCFD1-207ENST00000544052 IGLV2-23P01705 113 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 MBP02144 154 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 GNAO1P09471 354 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 STAG3L2P0CL84 134 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 RND2P52198 227 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 STXBP1P61764 594 aaKnown RBP2.49□□□□□ -2.01
SCFD1-207ENST00000544052 RAB11AP62491 216 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 RAB11BQ15907 218 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 ZNF726P1Q15940 193 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 ANKRD22Q5VYY1 191 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 PLCXD3Q63HM9 321 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 DNAJC24Q6P3W2 148 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 CMC1Q7Z7K0 106 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 MICU2Q8IYU8 434 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 SLC25A45Q8N413 288 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 OR9G4Q8NGQ1 327 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 LKAAEAR1Q8TD35 194 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 GPX8Q8TED1 209 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 ASZ1Q8WWH4 475 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 KLK6Q92876 244 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 EEF1AKMT3Q96AZ1 226 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 FAM3DQ96BQ1 224 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 RNF185Q96GF1 192 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 SLC35E1Q96K37 410 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 SERPINB11Q96P15 392 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 COL21A1Q96P44 957 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 SH3GL3Q99963 347 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 KRTAP4-4Q9BYR3 166 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 PRRG3Q9BZD7 231 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 UCK2Q9BZX2 261 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 IQCGQ9H095 443 aaKnown RBP2.49□□□□□ -2.01
SCFD1-207ENST00000544052 RGCCQ9H4X1 137 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 SPACA1Q9HBV2 294 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 MRPS30Q9NP92 439 aaKnown RBP2.49□□□□□ -2.01
SCFD1-207ENST00000544052 CCDC59Q9P031 241 aaKnown RBP2.49□□□□□ -2.01
SCFD1-207ENST00000544052 PEF1Q9UBV8 284 aaKnown RBP2.49□□□□□ -2.01
SCFD1-207ENST00000544052 CLN8Q9UBY8 286 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 SHPKQ9UHJ6 478 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 ZNF462Q96JM2 2506 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 PRSS37A4D1T9 235 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 H0YHG0 523 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 SIVA1O15304 175 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 NUPL2O15504 423 aaKnown RBP2.49□□□□□ -2.01
SCFD1-207ENST00000544052 CD5LO43866 347 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 STX10O60499 249 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 IVLP07476 585 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 CCDC172P0C7W6 258 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 UBCP0CG48 685 aaKnown RBP2.49□□□□□ -2.01
SCFD1-207ENST00000544052 PRKACBP22694 351 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 OR1E1P30953 314 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 GPX4P36969 197 aaPredicted RBP2.49□□□□□ -2.01
SCFD1-207ENST00000544052 GPR4P46093 362 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 NMUP48645 174 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 CCR6P51684 374 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 SYCP1Q15431 976 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 HSP90AA4PQ58FG1 418 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 PIGGQ5H8A4 983 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 CCNJQ5T5M9 372 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 HES3Q5TGS1 186 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 SLC25A25Q6KCM7 469 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 NCCRP1Q6ZVX7 275 aaPredicted RBP2.49□□□□□ -2.01
SCFD1-207ENST00000544052 STPG2Q8N412 459 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 MREGQ8N565 214 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 TTC29Q8NA56 475 aaPredicted RBP2.49□□□□□ -2.01
SCFD1-207ENST00000544052 OR52E5Q8NH55 327 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 JOSD2Q8TAC2 188 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 ACTRT1Q8TDG2 376 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 BTN2A3PQ96KV6 586 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 BMFQ96LC9 184 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 KLF6Q99612 283 aaPredicted RBP2.49□□□□□ -2.01
SCFD1-207ENST00000544052 ECSITQ9BQ95 431 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 ACTR3CQ9C0K3 210 aaPredicted RBP2.49□□□□□ -2.01
SCFD1-207ENST00000544052 TCEAL2Q9H3H9 227 aaPredicted RBP2.49□□□□□ -2.01
SCFD1-207ENST00000544052 CDC42EP4Q9H3Q1 356 aaKnown RBP2.49□□□□□ -2.01
SCFD1-207ENST00000544052 PRORYQ9H606 182 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 TREM1Q9NP99 234 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 ABCB10Q9NRK6 738 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 RMND1Q9NWS8 449 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 ZNF226Q9NYT6 803 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 CELA1Q9UNI1 258 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 HS3ST2Q9Y278 367 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 C15orf41Q9Y2V0 281 aa2.49□□□□□ -2.01
SCFD1-207ENST00000544052 TET2Q6N021 2002 aaPredicted RBP2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms