RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 C16orf95Q9H693 158 aa9.72□□□□□ -0.85
GABPB1-206ENST00000543881 ABCB9Q9NP78 766 aa9.72□□□□□ -0.85
GABPB1-206ENST00000543881 IGKV1D-17A0A075B6S4 117 aa9.71□□□□□ -0.86
GABPB1-206ENST00000543881 A0A0U1RQV5 110 aa9.71□□□□□ -0.86
GABPB1-206ENST00000543881 ZNF816-ZNF321PA0A0X1KG74 233 aa9.71□□□□□ -0.86
GABPB1-206ENST00000543881 A0A1W2PRD5 423 aa9.71□□□□□ -0.86
GABPB1-206ENST00000543881 A0A1W2PRF3 423 aa9.71□□□□□ -0.86
GABPB1-206ENST00000543881 A0A1W2PRM7 423 aa9.71□□□□□ -0.86
GABPB1-206ENST00000543881 ZNF732B4DXR9 585 aa9.71□□□□□ -0.86
GABPB1-206ENST00000543881 M0R129 80 aa9.71□□□□□ -0.86
GABPB1-206ENST00000543881 GPR37O15354 613 aa9.71□□□□□ -0.86
GABPB1-206ENST00000543881 SIGLEC5O15389 551 aa9.71□□□□□ -0.86
GABPB1-206ENST00000543881 PRKYO43930 277 aa9.71□□□□□ -0.86
GABPB1-206ENST00000543881 OPN1MWP04001 364 aa9.71□□□□□ -0.86
GABPB1-206ENST00000543881 ACAA1P09110 424 aaPredicted RBP9.71□□□□□ -0.86
GABPB1-206ENST00000543881 OPN1MW2P0DN77 364 aa9.71□□□□□ -0.86
GABPB1-206ENST00000543881 OPN1MW3P0DN78 364 aa9.71□□□□□ -0.86
GABPB1-206ENST00000543881 EPHA2P29317 976 aa9.71□□□□□ -0.86
GABPB1-206ENST00000543881 MAP2K3P46734 347 aa9.71□□□□□ -0.86
GABPB1-206ENST00000543881 ROM1Q03395 351 aa9.71□□□□□ -0.86
GABPB1-206ENST00000543881 MFGE8Q08431 387 aaPredicted RBP9.71□□□□□ -0.86
GABPB1-206ENST00000543881 KLRD1Q13241 179 aa9.71□□□□□ -0.86
GABPB1-206ENST00000543881 PTGES3Q15185 160 aaKnown RBP9.71□□□□□ -0.86
GABPB1-206ENST00000543881 CEACAM21Q3KPI0 293 aa9.71□□□□□ -0.86
GABPB1-206ENST00000543881 LRRC10Q5BKY1 277 aa9.71□□□□□ -0.86
GABPB1-206ENST00000543881 GDPGP1Q6ZNW5 385 aa9.71□□□□□ -0.86
GABPB1-206ENST00000543881 PNKDQ8N490 385 aa9.71□□□□□ -0.86
GABPB1-206ENST00000543881 FAM81AQ8TBF8 368 aa9.71□□□□□ -0.86
GABPB1-206ENST00000543881 OR51E1Q8TCB6 317 aa9.71□□□□□ -0.86
GABPB1-206ENST00000543881 H1FXQ92522 213 aaKnown RBP9.71□□□□□ -0.86
GABPB1-206ENST00000543881 NRBF2Q96F24 287 aa9.71□□□□□ -0.86
GABPB1-206ENST00000543881 DMRTB1Q96MA1 342 aa9.71□□□□□ -0.86
GABPB1-206ENST00000543881 OR8B4Q96RC9 309 aa9.71□□□□□ -0.86
GABPB1-206ENST00000543881 PBOV1Q9GZY1 135 aa9.71□□□□□ -0.86
GABPB1-206ENST00000543881 ELL3Q9HB65 397 aaPredicted RBP9.71□□□□□ -0.86
GABPB1-206ENST00000543881 GPR84Q9NQS5 396 aa9.71□□□□□ -0.86
GABPB1-206ENST00000543881 PAPOLBQ9NRJ5 636 aaKnown RBP9.71□□□□□ -0.86
GABPB1-206ENST00000543881 NLKQ9UBE8 527 aa9.71□□□□□ -0.86
GABPB1-206ENST00000543881 SLC25A10Q9UBX3 287 aaPredicted RBP9.71□□□□□ -0.86
GABPB1-206ENST00000543881 ACOD1A6NK06 481 aa9.7□□□□□ -0.86
GABPB1-206ENST00000543881 OR2AT4A6NND4 320 aa9.7□□□□□ -0.86
GABPB1-206ENST00000543881 MAGEB4O15481 346 aaPredicted RBP9.7□□□□□ -0.86
GABPB1-206ENST00000543881 MITFO75030 526 aaPredicted RBP9.7□□□□□ -0.86
GABPB1-206ENST00000543881 SRSF10O75494 262 aaKnown RBP9.7□□□□□ -0.86
GABPB1-206ENST00000543881 DNAJC8O75937 253 aaPredicted RBP9.7□□□□□ -0.86
GABPB1-206ENST00000543881 PSG2P11465 335 aa9.7□□□□□ -0.86
GABPB1-206ENST00000543881 FAHP16930 419 aa9.7□□□□□ -0.86
GABPB1-206ENST00000543881 GLRA1P23415 457 aa9.7□□□□□ -0.86
GABPB1-206ENST00000543881 GNG3P63215 75 aa9.7□□□□□ -0.86
GABPB1-206ENST00000543881 EFNB1P98172 346 aa9.7□□□□□ -0.86
GABPB1-206ENST00000543881 KCTD18Q6PI47 426 aaPredicted RBP9.7□□□□□ -0.86
GABPB1-206ENST00000543881 ZNF679Q8IYX0 411 aa9.7□□□□□ -0.86
GABPB1-206ENST00000543881 ZNRF1Q8ND25 227 aa9.7□□□□□ -0.86
GABPB1-206ENST00000543881 MRAPQ8TCY5 172 aa9.7□□□□□ -0.86
GABPB1-206ENST00000543881 BCAS4Q8TDM0 211 aa9.7□□□□□ -0.86
GABPB1-206ENST00000543881 LRTOMTQ8WZ04 291 aa9.7□□□□□ -0.86
GABPB1-206ENST00000543881 MED30Q96HR3 178 aa9.7□□□□□ -0.86
GABPB1-206ENST00000543881 HIST1H2AAQ96QV6 131 aa9.7□□□□□ -0.86
GABPB1-206ENST00000543881 CADM1Q9BY67 442 aaKnown RBP9.7□□□□□ -0.86
GABPB1-206ENST00000543881 MROQ9BYG7 248 aa9.7□□□□□ -0.86
GABPB1-206ENST00000543881 DPAGT1Q9H3H5 408 aa9.7□□□□□ -0.86
GABPB1-206ENST00000543881 ZNF222Q9UK12 451 aa9.7□□□□□ -0.86
GABPB1-206ENST00000543881 MAB21L2Q9Y586 359 aa9.7□□□□□ -0.86
GABPB1-206ENST00000543881 NKX6-3A6NJ46 265 aa9.69□□□□□ -0.86
GABPB1-206ENST00000543881 NPFFO15130 113 aa9.69□□□□□ -0.86
GABPB1-206ENST00000543881 GSC2O15499 205 aa9.69□□□□□ -0.86
GABPB1-206ENST00000543881 ZNF254O75437 659 aa9.69□□□□□ -0.86
GABPB1-206ENST00000543881 TTRP02766 147 aa9.69□□□□□ -0.86
GABPB1-206ENST00000543881 GABRA2P47869 451 aa9.69□□□□□ -0.86
GABPB1-206ENST00000543881 CAV3P56539 151 aa9.69□□□□□ -0.86
GABPB1-206ENST00000543881 EGR3Q06889 387 aa9.69□□□□□ -0.86
GABPB1-206ENST00000543881 AADACL4Q5VUY2 407 aa9.69□□□□□ -0.86
GABPB1-206ENST00000543881 DHRS7BQ6IAN0 325 aaPredicted RBP9.69□□□□□ -0.86
GABPB1-206ENST00000543881 MOB3CQ70IA8 216 aa9.69□□□□□ -0.86
GABPB1-206ENST00000543881 CMTM4Q8IZR5 234 aa9.69□□□□□ -0.86
GABPB1-206ENST00000543881 OR5A2Q8NGI9 324 aa9.69□□□□□ -0.86
GABPB1-206ENST00000543881 DNAJC9Q8WXX5 260 aa9.69□□□□□ -0.86
GABPB1-206ENST00000543881 AQP3Q92482 292 aa9.69□□□□□ -0.86
GABPB1-206ENST00000543881 FAM210AQ96ND0 272 aa9.69□□□□□ -0.86
GABPB1-206ENST00000543881 APOL4Q9BPW4 351 aa9.69□□□□□ -0.86
GABPB1-206ENST00000543881 TEX12Q9BXU0 123 aa9.69□□□□□ -0.86
GABPB1-206ENST00000543881 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.69□□□□□ -0.86
GABPB1-206ENST00000543881 ZNRD1Q9P1U0 126 aa9.69□□□□□ -0.86
GABPB1-206ENST00000543881 NUFIP1Q9UHK0 495 aaKnown RBP9.69□□□□□ -0.86
GABPB1-206ENST00000543881 PIGLQ9Y2B2 252 aa9.69□□□□□ -0.86
GABPB1-206ENST00000543881 FAM96BQ9Y3D0 163 aa9.69□□□□□ -0.86
GABPB1-206ENST00000543881 TSPAN9O75954 239 aa9.68□□□□□ -0.86
GABPB1-206ENST00000543881 ATP6V1B1P15313 513 aa9.68□□□□□ -0.86
GABPB1-206ENST00000543881 NDUFB7P17568 137 aa9.68□□□□□ -0.86
GABPB1-206ENST00000543881 LOXL3P58215 753 aa9.68□□□□□ -0.86
GABPB1-206ENST00000543881 RIPPLY1Q0D2K3 151 aa9.68□□□□□ -0.86
GABPB1-206ENST00000543881 LCN1P1Q5VSP4 162 aa9.68□□□□□ -0.86
GABPB1-206ENST00000543881 PLCXD3Q63HM9 321 aa9.68□□□□□ -0.86
GABPB1-206ENST00000543881 HCP5Q6MZN7 132 aa9.68□□□□□ -0.86
GABPB1-206ENST00000543881 HAGHLQ6PII5 290 aaPredicted RBP9.68□□□□□ -0.86
GABPB1-206ENST00000543881 PLEKHG7Q6ZR37 379 aa9.68□□□□□ -0.86
GABPB1-206ENST00000543881 C1orf122Q6ZSJ8 110 aa9.68□□□□□ -0.86
GABPB1-206ENST00000543881 MEPCEQ7L2J0 689 aaKnown RBP9.68□□□□□ -0.86
GABPB1-206ENST00000543881 COMMD2Q86X83 199 aa9.68□□□□□ -0.86
GABPB1-206ENST00000543881 TCEANCQ8N8B7 351 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms