RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 LYRM2Q9NU23 88 aaPredicted RBP7.88□□□□□ -1.15
VPS13D-212ENST00000543766 EXO1Q9UQ84 846 aaKnown RBP7.88□□□□□ -1.15
VPS13D-212ENST00000543766 INSIG2Q9Y5U4 225 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 TRAV39A0A0B4J263 110 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 A0A0B4J2A0 478 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 SLC25A12O75746 678 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 NDUFB8O95169 186 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 CD160O95971 181 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 OR13C7P0DN81 318 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 SELENOPP49908 381 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 RAP2BP61225 183 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 RPS13P62277 151 aaKnown RBP7.88□□□□□ -1.15
VPS13D-212ENST00000543766 ZNF77Q15935 545 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 LRRC75A-AS1Q8N1F1 130 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 TTC9BQ8N6N2 239 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 ZNF611Q8N823 705 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 OR1J4Q8NGS1 313 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 OR4L1Q8NH43 312 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 IL22RA2Q969J5 263 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 SLC25A31Q9H0C2 315 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 WSB2Q9NYS7 404 aaPredicted RBP7.88□□□□□ -1.15
VPS13D-212ENST00000543766 PEMTQ9UBM1 199 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 SHPKQ9UHJ6 478 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 OR51B2Q9Y5P1 312 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 A0A0U1RQF3 1178 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 C21orf140B9A014 251 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 ZNF670-ZNF695F2Z2N8 137 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 TNFSF15O95150 251 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 H1F0P07305 194 aaKnown RBP7.88□□□□□ -1.15
VPS13D-212ENST00000543766 TRGC1P0CF51 173 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 FGF5P12034 268 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 PGAM2P15259 253 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 CHATP28329 748 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 IMPA1P29218 277 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 CRYBB2P43320 205 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 POLR2JP52435 117 aaKnown RBP7.88□□□□□ -1.15
VPS13D-212ENST00000543766 ZNF660Q6AZW8 331 aaPredicted RBP7.88□□□□□ -1.15
VPS13D-212ENST00000543766 DOCK3Q8IZD9 2030 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 INO80EQ8NBZ0 244 aaPredicted RBP7.88□□□□□ -1.15
VPS13D-212ENST00000543766 C2CD4AQ8NCU7 369 aaPredicted RBP7.88□□□□□ -1.15
VPS13D-212ENST00000543766 PLPP5Q8NEB5 264 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 OR52R1Q8NGF1 315 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 PROKR1Q8TCW9 393 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 POP5Q969H6 163 aaKnown RBP7.88□□□□□ -1.15
VPS13D-212ENST00000543766 FLYWCH2Q96CP2 140 aaKnown RBP7.88□□□□□ -1.15
VPS13D-212ENST00000543766 PSMG3Q9BT73 122 aaPredicted RBP7.88□□□□□ -1.15
VPS13D-212ENST00000543766 SYT4Q9H2B2 425 aa7.88□□□□□ -1.15
VPS13D-212ENST00000543766 TMEM269A0A1B0GVZ9 245 aa7.87□□□□□ -1.15
VPS13D-212ENST00000543766 PLPP3O14495 311 aa7.87□□□□□ -1.15
VPS13D-212ENST00000543766 HSBP1O75506 76 aa7.87□□□□□ -1.15
VPS13D-212ENST00000543766 LRATO95237 230 aa7.87□□□□□ -1.15
VPS13D-212ENST00000543766 FAHP16930 419 aa7.87□□□□□ -1.15
VPS13D-212ENST00000543766 OR10J1P30954 320 aa7.87□□□□□ -1.15
VPS13D-212ENST00000543766 OR3A4PP47883 348 aa7.87□□□□□ -1.15
VPS13D-212ENST00000543766 CXADRP78310 365 aa7.87□□□□□ -1.15
VPS13D-212ENST00000543766 HSD52Q0P140 79 aa7.87□□□□□ -1.15
VPS13D-212ENST00000543766 TMEM183BQ1AE95 376 aa7.87□□□□□ -1.15
VPS13D-212ENST00000543766 TMEM92Q6UXU6 159 aa7.87□□□□□ -1.15
VPS13D-212ENST00000543766 CFAP52Q8N1V2 620 aa7.87□□□□□ -1.15
VPS13D-212ENST00000543766 SLC25A46Q96AG3 418 aa7.87□□□□□ -1.15
VPS13D-212ENST00000543766 MAP1LC3AQ9H492 121 aa7.87□□□□□ -1.15
VPS13D-212ENST00000543766 ARL15Q9NXU5 204 aa7.87□□□□□ -1.15
VPS13D-212ENST00000543766 CDC42EP3Q9UKI2 254 aa7.87□□□□□ -1.15
VPS13D-212ENST00000543766 TRAV8-7A0A075B6U6 113 aa7.87□□□□□ -1.15
VPS13D-212ENST00000543766 TRBV5-3A0A0A0MS03 114 aa7.87□□□□□ -1.15
VPS13D-212ENST00000543766 HIDE1A8MVS5 230 aa7.87□□□□□ -1.15
VPS13D-212ENST00000543766 TRAF3IP2O43734 574 aaPredicted RBP7.87□□□□□ -1.15
VPS13D-212ENST00000543766 HGFP14210 728 aa7.87□□□□□ -1.15
VPS13D-212ENST00000543766 HOXB9P17482 250 aaPredicted RBP7.87□□□□□ -1.15
VPS13D-212ENST00000543766 HTR1FP30939 366 aa7.87□□□□□ -1.15
VPS13D-212ENST00000543766 SULT1A1P50225 295 aa7.87□□□□□ -1.15
VPS13D-212ENST00000543766 PPOXP50336 477 aa7.87□□□□□ -1.15
VPS13D-212ENST00000543766 FOXL1Q12952 345 aa7.87□□□□□ -1.15
VPS13D-212ENST00000543766 ZNF585BQ52M93 769 aa7.87□□□□□ -1.15
VPS13D-212ENST00000543766 TP53I3Q53FA7 332 aa7.87□□□□□ -1.15
VPS13D-212ENST00000543766 DMRTC1Q5HYR2 192 aa7.87□□□□□ -1.15
VPS13D-212ENST00000543766 MSRB3Q8IXL7 192 aa7.87□□□□□ -1.15
VPS13D-212ENST00000543766 ZNF595Q8IYB9 648 aa7.87□□□□□ -1.15
VPS13D-212ENST00000543766 OR4F6Q8NGB9 312 aa7.87□□□□□ -1.15
VPS13D-212ENST00000543766 GPR119Q8TDV5 335 aa7.87□□□□□ -1.15
VPS13D-212ENST00000543766 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.87□□□□□ -1.15
VPS13D-212ENST00000543766 NEU4Q8WWR8 484 aaPredicted RBP7.87□□□□□ -1.15
VPS13D-212ENST00000543766 KIRREL1Q96J84 757 aa7.87□□□□□ -1.15
VPS13D-212ENST00000543766 SGK494Q96LW2 274 aa7.87□□□□□ -1.15
VPS13D-212ENST00000543766 GINS3Q9BRX5 216 aa7.87□□□□□ -1.15
VPS13D-212ENST00000543766 SNX10Q9Y5X0 201 aa7.87□□□□□ -1.15
VPS13D-212ENST00000543766 CCDC88CQ9P219 2028 aa7.87□□□□□ -1.15
VPS13D-212ENST00000543766 MBLAC1A4D2B0 266 aaPredicted RBP7.87□□□□□ -1.15
VPS13D-212ENST00000543766 ZNF561-AS1K7EIQ3 104 aa7.87□□□□□ -1.15
VPS13D-212ENST00000543766 ERI3O43414 337 aaKnown RBP7.87□□□□□ -1.15
VPS13D-212ENST00000543766 SOX14O95416 240 aa7.87□□□□□ -1.15
VPS13D-212ENST00000543766 HLA-HP01893 362 aa7.87□□□□□ -1.15
VPS13D-212ENST00000543766 GUCA1AP43080 201 aaPredicted RBP7.87□□□□□ -1.15
VPS13D-212ENST00000543766 EFNA5P52803 228 aa7.87□□□□□ -1.15
VPS13D-212ENST00000543766 OR8B8Q15620 311 aa7.87□□□□□ -1.15
VPS13D-212ENST00000543766 SPIN4Q56A73 249 aa7.87□□□□□ -1.15
VPS13D-212ENST00000543766 C3orf56Q8N813 242 aa7.87□□□□□ -1.15
VPS13D-212ENST00000543766 ZNF485Q8NCK3 441 aa7.87□□□□□ -1.15
VPS13D-212ENST00000543766 OR51A4Q8NGJ6 313 aa7.87□□□□□ -1.15
VPS13D-212ENST00000543766 OR13C6PQ8NH95 151 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms