RNA–Protein interactions for RNA: ENST00000543354.5

RPS6KC1-206, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best) BASIC

Gene RPS6KC1, Length 4,082 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-206ENST00000543354 IGKV1-8A0A0C4DH67 115 aa12.34□□□□□ -0.43
RPS6KC1-206ENST00000543354 CXCL13O43927 109 aa12.34□□□□□ -0.43
RPS6KC1-206ENST00000543354 RCC1P18754 421 aaPredicted RBP12.34□□□□□ -0.43
RPS6KC1-206ENST00000543354 RAB4AP20338 218 aa12.34□□□□□ -0.43
RPS6KC1-206ENST00000543354 SNCAP37840 140 aa12.34□□□□□ -0.43
RPS6KC1-206ENST00000543354 EIF1P41567 113 aaKnown RBP12.34□□□□□ -0.43
RPS6KC1-206ENST00000543354 PNLIPRP2P54317 469 aa12.34□□□□□ -0.43
RPS6KC1-206ENST00000543354 SHBQ15464 509 aa12.34□□□□□ -0.43
RPS6KC1-206ENST00000543354 TMEM240Q5SV17 173 aa12.34□□□□□ -0.43
RPS6KC1-206ENST00000543354 PRSS54Q6PEW0 395 aa12.34□□□□□ -0.43
RPS6KC1-206ENST00000543354 FAM185AQ8N0U4 392 aa12.34□□□□□ -0.43
RPS6KC1-206ENST00000543354 SLC25A38Q96DW6 304 aa12.34□□□□□ -0.43
RPS6KC1-206ENST00000543354 MS4A3Q96HJ5 214 aa12.34□□□□□ -0.43
RPS6KC1-206ENST00000543354 ZNF275Q9NSD4 429 aaPredicted RBP12.34□□□□□ -0.43
RPS6KC1-206ENST00000543354 ABCD4O14678 606 aa12.33□□□□□ -0.43
RPS6KC1-206ENST00000543354 SFT2D2O95562 160 aa12.33□□□□□ -0.43
RPS6KC1-206ENST00000543354 HAAOP46952 286 aa12.33□□□□□ -0.43
RPS6KC1-206ENST00000543354 CATR1Q13166 79 aa12.33□□□□□ -0.43
RPS6KC1-206ENST00000543354 ZNF66Q6ZN08 573 aa12.33□□□□□ -0.43
RPS6KC1-206ENST00000543354 Q6ZS52 159 aa12.33□□□□□ -0.43
RPS6KC1-206ENST00000543354 OR5C1Q8NGR4 320 aa12.33□□□□□ -0.43
RPS6KC1-206ENST00000543354 PLEKHF2Q9H8W4 249 aa12.33□□□□□ -0.43
RPS6KC1-206ENST00000543354 TCN2P20062 427 aa12.33□□□□□ -0.44
RPS6KC1-206ENST00000543354 ECI1P42126 302 aa12.33□□□□□ -0.44
RPS6KC1-206ENST00000543354 PLAC9Q5JTB6 97 aa12.33□□□□□ -0.44
RPS6KC1-206ENST00000543354 ASB5Q8WWX0 329 aa12.33□□□□□ -0.44
RPS6KC1-206ENST00000543354 PGLYRP3Q96LB9 341 aa12.33□□□□□ -0.44
RPS6KC1-206ENST00000543354 GNRHR2Q96P88 292 aa12.33□□□□□ -0.44
RPS6KC1-206ENST00000543354 AMELYQ99218 206 aa12.33□□□□□ -0.44
RPS6KC1-206ENST00000543354 VN1R1Q9GZP7 353 aa12.33□□□□□ -0.44
RPS6KC1-206ENST00000543354 HS3ST3A1Q9Y663 406 aa12.33□□□□□ -0.44
RPS6KC1-206ENST00000543354 COL11A1P12107 1806 aaPredicted RBP12.33□□□□□ -0.44
RPS6KC1-206ENST00000543354 BRWD3Q6RI45 1802 aa12.33□□□□□ -0.44
RPS6KC1-206ENST00000543354 DOCK6Q96HP0 2047 aa12.33□□□□□ -0.44
RPS6KC1-206ENST00000543354 PIN1P1O15428 100 aa12.33□□□□□ -0.44
RPS6KC1-206ENST00000543354 C1QL1O75973 258 aa12.33□□□□□ -0.44
RPS6KC1-206ENST00000543354 OR5AC1P0C628 307 aa12.33□□□□□ -0.44
RPS6KC1-206ENST00000543354 FAM199XQ6PEV8 388 aaPredicted RBP12.33□□□□□ -0.44
RPS6KC1-206ENST00000543354 ZNF610Q8N9Z0 462 aa12.33□□□□□ -0.44
RPS6KC1-206ENST00000543354 TLNRD1Q9H1K6 362 aa12.33□□□□□ -0.44
RPS6KC1-206ENST00000543354 RASL12Q9NYN1 266 aa12.33□□□□□ -0.44
RPS6KC1-206ENST00000543354 FREM3P0C091 2139 aa12.33□□□□□ -0.44
RPS6KC1-206ENST00000543354 A0A1W2PP11 408 aa12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 DHHO43323 396 aa12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 GCH1P30793 250 aa12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 PTGFRP43088 359 aa12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 DUSP3P51452 185 aaPredicted RBP12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 EDDM3BP56851 147 aa12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 ROBO4Q8WZ75 1007 aa12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 PHYHIPLQ96FC7 376 aa12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 ZMIZ1Q9ULJ6 1067 aa12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 STRAPQ9Y3F4 350 aaKnown RBP12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 ABCA7Q8IZY2 2146 aa12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 MASP2O00187 686 aa12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 HLA-DOBP13765 273 aa12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 CXCL12P48061 93 aa12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 POLR2GP62487 172 aaKnown RBP eCLIP12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 ARHGEF39Q8N4T4 335 aa12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 OR6S1Q8NH40 331 aa12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 NANOS1Q8WY41 292 aaKnown RBP12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 FAM103A1Q9BTL3 118 aaKnown RBP12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 SLC35B3Q9H1N7 401 aa12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 PKDREJQ9NTG1 2253 aa12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 MPDZO75970 2070 aa12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 KIR2DS1A0A191URI9 304 aa12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 PLSCR5A0PG75 271 aa12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 FAM166BA8MTA8 275 aa12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 H0YIG0 161 aa12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 CTRB1P17538 263 aa12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 MDKP21741 143 aaPredicted RBP12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 FPR2P25090 351 aa12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 KIR2DS4P43632 304 aa12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 NPBWR1P48145 328 aa12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 RAB1AP62820 205 aa12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 KIR2DS1Q14954 304 aa12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 CTRB2Q6GPI1 263 aa12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 FAM109BQ6ICB4 259 aaPredicted RBP12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 LRP11Q86VZ4 500 aa12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 RHBDD1Q8TEB9 315 aa12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 STRADBQ9C0K7 418 aa12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 RAB18Q9NP72 206 aa12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 MGAMO43451 1857 aa12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 ACACAQ13085 2346 aa12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 SERPINE3A8MV23 424 aa12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 SIRPB1O00241 398 aa12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 DEGS1O15121 323 aa12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 LINC01565O15544 149 aa12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 TGFBR3Q03167 851 aa12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 OR13D1Q8NGV5 346 aa12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 CA5BP1Q8WTZ4 195 aa12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 ST8SIA1Q92185 356 aa12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 LPAR3Q9UBY5 353 aa12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 CES1P1Q9UKY3 287 aa12.32□□□□□ -0.44
RPS6KC1-206ENST00000543354 FRG2CA6NGY1 282 aa12.31□□□□□ -0.44
RPS6KC1-206ENST00000543354 FGF8P55075 233 aaPredicted RBP12.31□□□□□ -0.44
RPS6KC1-206ENST00000543354 H3F3AP84243 136 aa12.31□□□□□ -0.44
RPS6KC1-206ENST00000543354 DGAT2L6Q6ZPD8 337 aa12.31□□□□□ -0.44
RPS6KC1-206ENST00000543354 Q7L0L9 218 aa12.31□□□□□ -0.44
RPS6KC1-206ENST00000543354 COMMD1Q8N668 190 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms