RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 IL4I1Q96RQ9 567 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 WACQ9BTA9 647 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 NMNAT2Q9BZQ4 307 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 IMPAD1Q9NX62 359 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 POU2F3Q9UKI9 436 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 DHDHQ9UQ10 334 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 RNF24Q9Y225 148 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 RNF115Q9Y4L5 304 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 GMPPBQ9Y5P6 360 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 ALPK2Q86TB3 2170 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 CSMD1Q96PZ7 3565 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 IGHV1-18A0A0C4DH31 117 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 M0R129 80 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 AP4M1O00189 453 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 HOXA3O43365 443 aaPredicted RBP4.38□□□□□ -1.71
CLIP1-217ENST00000543205 IGLV1-44P01699 117 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 SERPINA5P05154 406 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 MMP7P09237 267 aaPredicted RBP4.38□□□□□ -1.71
CLIP1-217ENST00000543205 CECR9P0C854 216 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 DANCRP0C864 163 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 ZNF32P17041 273 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 EEF1B2P24534 225 aaKnown RBP4.38□□□□□ -1.71
CLIP1-217ENST00000543205 PRDX2P32119 198 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 APLNRP35414 380 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 GGT2P36268 569 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 MTCP1P56278 107 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 PSG4Q00888 419 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 SCRN3Q0VDG4 424 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 IL18Q14116 193 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 TBC1D28Q2M2D7 210 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 PABPC1L2AQ5JQF8 200 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 SLC35D3Q5M8T2 416 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 LCN1P1Q5VSP4 162 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 OTPQ5XKR4 325 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 ADAM5Q6NVV9 412 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 ASCC1Q8N9N2 400 aaKnown RBP4.38□□□□□ -1.71
CLIP1-217ENST00000543205 SLC30A7Q8NEW0 376 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 GJC3Q8NFK1 279 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 SLC26A10Q8NG04 563 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 OR1J2Q8NGS2 313 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 FAM81AQ8TBF8 368 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 ZNRF4Q8WWF5 429 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 CYGBQ8WWM9 190 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 RAB40CQ96S21 281 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 MBOAT4Q96T53 435 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 HCAR1Q9BXC0 346 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 PKIBQ9C010 78 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 OR2H1Q9GZK4 316 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 VCX3BQ9H321 246 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 C1orf198Q9H425 327 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 CDH20Q9HBT6 801 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 NOX3Q9HBY0 568 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 CHMP1AQ9HD42 196 aaPredicted RBP4.38□□□□□ -1.71
CLIP1-217ENST00000543205 DNAJC4Q9NNZ3 241 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 HINT3Q9NQE9 182 aaKnown RBP4.38□□□□□ -1.71
CLIP1-217ENST00000543205 NUDT15Q9NV35 164 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 KCNG2Q9UJ96 466 aa4.38□□□□□ -1.71
CLIP1-217ENST00000543205 ABCA2Q9BZC7 2435 aa4.37□□□□□ -1.71
CLIP1-217ENST00000543205 LOC100130705A0A1B0GUX0 176 aa4.37□□□□□ -1.71
CLIP1-217ENST00000543205 F5H697 171 aa4.37□□□□□ -1.71
CLIP1-217ENST00000543205 ZNF593O00488 134 aaPredicted RBP4.37□□□□□ -1.71
CLIP1-217ENST00000543205 SGCEO43556 437 aa4.37□□□□□ -1.71
CLIP1-217ENST00000543205 MPZL2O60487 215 aa4.37□□□□□ -1.71
CLIP1-217ENST00000543205 ATP6V1G2O95670 118 aa4.37□□□□□ -1.71
CLIP1-217ENST00000543205 PLAUP00749 431 aa4.37□□□□□ -1.71
CLIP1-217ENST00000543205 PRF1P14222 555 aa4.37□□□□□ -1.71
CLIP1-217ENST00000543205 ZNF14P17017 642 aaPredicted RBP4.37□□□□□ -1.71
CLIP1-217ENST00000543205 CCNOP22674 350 aa4.37□□□□□ -1.71
CLIP1-217ENST00000543205 UCP1P25874 307 aa4.37□□□□□ -1.71
CLIP1-217ENST00000543205 STOMP27105 288 aa4.37□□□□□ -1.71
CLIP1-217ENST00000543205 LOXP28300 417 aaPredicted RBP4.37□□□□□ -1.71
CLIP1-217ENST00000543205 FCGR2BP31994 310 aaPredicted RBP4.37□□□□□ -1.71
CLIP1-217ENST00000543205 OR3A1P47881 315 aa4.37□□□□□ -1.71
CLIP1-217ENST00000543205 NPBWR1P48145 328 aa4.37□□□□□ -1.71
CLIP1-217ENST00000543205 GDI2P50395 445 aaKnown RBP4.37□□□□□ -1.71
CLIP1-217ENST00000543205 CDH11P55287 796 aa4.37□□□□□ -1.71
CLIP1-217ENST00000543205 NAAAQ02083 359 aa4.37□□□□□ -1.71
CLIP1-217ENST00000543205 APOFQ13790 326 aa4.37□□□□□ -1.71
CLIP1-217ENST00000543205 PCK2Q16822 640 aa4.37□□□□□ -1.71
CLIP1-217ENST00000543205 C2orf68Q2NKX9 166 aa4.37□□□□□ -1.71
CLIP1-217ENST00000543205 SPANXN2Q5MJ10 180 aa4.37□□□□□ -1.71
CLIP1-217ENST00000543205 NXNL2Q5VZ03 156 aa4.37□□□□□ -1.71
CLIP1-217ENST00000543205 TTC23Q5W5X9 447 aa4.37□□□□□ -1.71
CLIP1-217ENST00000543205 ZNF774Q6NX45 483 aa4.37□□□□□ -1.71
CLIP1-217ENST00000543205 CDC20BQ86Y33 519 aa4.37□□□□□ -1.71
CLIP1-217ENST00000543205 ERI1Q8IV48 349 aaKnown RBP4.37□□□□□ -1.71
CLIP1-217ENST00000543205 GID4Q8IVV7 300 aa4.37□□□□□ -1.71
CLIP1-217ENST00000543205 STHQ8IWL8 128 aa4.37□□□□□ -1.71
CLIP1-217ENST00000543205 DHRSXQ8N5I4 330 aa4.37□□□□□ -1.71
CLIP1-217ENST00000543205 KBTBD8Q8NFY9 601 aa4.37□□□□□ -1.71
CLIP1-217ENST00000543205 OR4F15Q8NGB8 312 aa4.37□□□□□ -1.71
CLIP1-217ENST00000543205 TRUB1Q8WWH5 349 aaKnown RBP4.37□□□□□ -1.71
CLIP1-217ENST00000543205 AKAP1Q92667 903 aaKnown RBP eCLIP4.37□□□□□ -1.71
CLIP1-217ENST00000543205 ZMYND19Q96E35 227 aaPredicted RBP4.37□□□□□ -1.71
CLIP1-217ENST00000543205 ZNF75AQ96N20 296 aa4.37□□□□□ -1.71
CLIP1-217ENST00000543205 TEAD3Q99594 435 aa4.37□□□□□ -1.71
CLIP1-217ENST00000543205 APOL4Q9BPW4 351 aa4.37□□□□□ -1.71
CLIP1-217ENST00000543205 WDR76Q9H967 626 aa4.37□□□□□ -1.71
CLIP1-217ENST00000543205 UBTD1Q9HAC8 227 aa4.37□□□□□ -1.71
CLIP1-217ENST00000543205 MRPL22Q9NWU5 206 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms