RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 C2orf74A8MZ97 194 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 H3BNH8 94 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 PSMD12O00232 456 aaPredicted RBP2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 NUPL2O15504 423 aaKnown RBP2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 SLC37A4O43826 429 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 SC5DO75845 299 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 PIAS1O75925 651 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 AQP8O94778 261 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 TBX6O95947 436 aaPredicted RBP2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 OXTP01178 125 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 CATP04040 527 aaKnown RBP2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 CSNK2A2P19784 350 aaPredicted RBP2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 RAB3AP20336 220 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 RAB4AP20338 218 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 GPX4P36969 197 aaPredicted RBP2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 DLX1P56177 255 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 RAB4BP61018 213 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 ESRRGP62508 458 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 SKP1P63208 163 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 CSNK1G2P78368 415 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 FLI1Q01543 452 aaPredicted RBP2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 CLINT1Q14677 625 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 ZNF846Q147U1 533 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 OR7A5Q15622 319 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 NRF1Q16656 503 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 UBE2SQ16763 222 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 ATP6V1FQ16864 119 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 DNAL1Q4LDG9 190 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 PAGE2BQ5JRK9 111 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 TPTE2P1Q5T6R2 138 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 LCE1EQ5T753 118 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 ZNF620Q6ZNG0 422 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 GPRIN3Q6ZVF9 776 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 ZNF767PQ75MW2 155 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 FAM220AQ7Z4H9 259 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 UNC93AQ86WB7 457 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 ZADH2Q8N4Q0 377 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 TMEM252Q8N6L7 170 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 DUSP18Q8NEJ0 188 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 OR5H6Q8NGV6 325 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 OR6N2Q8NGY6 317 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 ZNF461Q8TAF7 563 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 LGALS14Q8TCE9 139 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 TMEM239Q8WW34 195 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 OR8D1Q8WZ84 308 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 YIPF5Q969M3 257 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 C12orf43Q96C57 262 aaKnown RBP2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 ISOC1Q96CN7 298 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 CENPNQ96H22 339 aaPredicted RBP2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 CNBD2Q96M20 576 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 LINC00479Q96M42 142 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 UTP23Q9BRU9 249 aaKnown RBP2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 BCL2L14Q9BZR8 327 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 SLC19A3Q9BZV2 496 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 SYT4Q9H2B2 425 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 Q9H3A6 140 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 RPF2Q9H7B2 306 aaKnown RBP2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 GNB4Q9HAV0 340 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 OR2S2Q9NQN1 319 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 MS4A12Q9NXJ0 267 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 CLEC5AQ9NY25 188 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 XCL2Q9UBD3 114 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 SHPKQ9UHJ6 478 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 CLEC2DQ9UHP7 191 aa2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 MRM2Q9UI43 246 aaKnown RBP2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 PTPRZ1P23471 2315 aaPredicted RBP2.99□□□□□ -1.93
SFSWAP-211ENST00000542813 ZFYVE26Q68DK2 2539 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 NFASCO94856 1347 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 MN1Q10571 1320 aaPredicted RBP2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 TRANK1O15050 2925 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 IGLV8-61A0A075B6I0 122 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 IGKV1D-13A0A0B4J2D9 117 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 EXOC1LA0A1B0GW35 172 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 NDUFAF8A1L188 74 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 ISPDA4D126 451 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 LINC00862A6NCI5 91 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 HACD1B0YJ81 288 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 LINC00587B1AMM8 73 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 CLDN25C9JDP6 229 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 H0YJX3 145 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 I3L4J1 428 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 ZNF780AO75290 641 aaPredicted RBP2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 ZMPSTE24O75844 475 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 CCNKO75909 580 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 AIFM1O95831 613 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 IGHV3-48P01763 117 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 SEMG1P04279 462 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 RHOCP08134 193 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 TRAPPC2P0DI81 140 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 TRAPPC2BP0DI82 140 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 IGKV1-13P0DP09 117 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 ZP3P21754 424 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 AK4P27144 223 aaPredicted RBP2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 FMO3P31513 532 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 CRATP43155 626 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 CSNK1DP48730 415 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 RAB7AP51149 207 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 SPCS3P61009 180 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 NUTF2P61970 127 aaKnown RBP2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 DYNLL1P63167 89 aaKnown RBP2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms