RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 OR3A2P47893 321 aa12.25□□□□□ -0.45
LDB3-207ENST00000542786 DAZAP2Q15038 168 aaPredicted RBP12.25□□□□□ -0.45
LDB3-207ENST00000542786 SCGB2B2Q4G0G5 96 aa12.25□□□□□ -0.45
LDB3-207ENST00000542786 LY6G6FQ5SQ64 297 aa12.25□□□□□ -0.45
LDB3-207ENST00000542786 MCEMP1Q8IX19 187 aa12.25□□□□□ -0.45
LDB3-207ENST00000542786 OR4K15Q8NH41 348 aa12.25□□□□□ -0.45
LDB3-207ENST00000542786 ZNF75AQ96N20 296 aa12.25□□□□□ -0.45
LDB3-207ENST00000542786 FGF23Q9GZV9 251 aaPredicted RBP12.25□□□□□ -0.45
LDB3-207ENST00000542786 IL36GQ9NZH8 169 aa12.25□□□□□ -0.45
LDB3-207ENST00000542786 ZNF581Q9P0T4 197 aa12.25□□□□□ -0.45
LDB3-207ENST00000542786 FAM230AA0A1W2PPH8 454 aa12.25□□□□□ -0.45
LDB3-207ENST00000542786 PMP2P02689 132 aa12.25□□□□□ -0.45
LDB3-207ENST00000542786 TMEM225BP0DP42 221 aa12.25□□□□□ -0.45
LDB3-207ENST00000542786 ARR3P36575 388 aa12.25□□□□□ -0.45
LDB3-207ENST00000542786 RBP2P50120 134 aa12.25□□□□□ -0.45
LDB3-207ENST00000542786 DHRS2Q13268 280 aa12.25□□□□□ -0.45
LDB3-207ENST00000542786 RTP5Q14D33 572 aa12.25□□□□□ -0.45
LDB3-207ENST00000542786 GUSBP1Q15486 140 aa12.25□□□□□ -0.45
LDB3-207ENST00000542786 C4orf46Q504U0 113 aa12.25□□□□□ -0.45
LDB3-207ENST00000542786 ACTBL2Q562R1 376 aa12.25□□□□□ -0.45
LDB3-207ENST00000542786 OR1K1Q8NGR3 316 aa12.25□□□□□ -0.45
LDB3-207ENST00000542786 LILRB4Q8NHJ6 448 aa12.25□□□□□ -0.45
LDB3-207ENST00000542786 RADILQ96JH8 1075 aa12.25□□□□□ -0.45
LDB3-207ENST00000542786 TMPRSS13Q9BYE2 586 aa12.25□□□□□ -0.45
LDB3-207ENST00000542786 DLL3Q9NYJ7 618 aa12.25□□□□□ -0.45
LDB3-207ENST00000542786 SERPINE3A8MV23 424 aa12.24□□□□□ -0.45
LDB3-207ENST00000542786 ZNHIT1O43257 154 aa12.24□□□□□ -0.45
LDB3-207ENST00000542786 SPRY1O43609 319 aaPredicted RBP12.24□□□□□ -0.45
LDB3-207ENST00000542786 SIX6O95475 246 aa12.24□□□□□ -0.45
LDB3-207ENST00000542786 CEACAM1P13688 526 aa12.24□□□□□ -0.45
LDB3-207ENST00000542786 MPGP29372 298 aa12.24□□□□□ -0.45
LDB3-207ENST00000542786 SRSF4Q08170 494 aaKnown RBP12.24□□□□□ -0.45
LDB3-207ENST00000542786 GK2Q14410 553 aaPredicted RBP12.24□□□□□ -0.45
LDB3-207ENST00000542786 PPA1Q15181 289 aa12.24□□□□□ -0.45
LDB3-207ENST00000542786 FBXW9Q5XUX1 488 aa12.24□□□□□ -0.45
LDB3-207ENST00000542786 TMED4Q7Z7H5 227 aa12.24□□□□□ -0.45
LDB3-207ENST00000542786 LHFPL1Q86WI0 220 aa12.24□□□□□ -0.45
LDB3-207ENST00000542786 PXT1Q8NFP0 134 aa12.24□□□□□ -0.45
LDB3-207ENST00000542786 CPNE2Q96FN4 548 aaPredicted RBP12.24□□□□□ -0.45
LDB3-207ENST00000542786 TECTBQ96PL2 329 aa12.24□□□□□ -0.45
LDB3-207ENST00000542786 METTL9Q9H1A3 318 aa12.24□□□□□ -0.45
LDB3-207ENST00000542786 TOXO94900 526 aa12.23□□□□□ -0.45
LDB3-207ENST00000542786 CCL2P13500 99 aa12.23□□□□□ -0.45
LDB3-207ENST00000542786 ZNF35P13682 527 aa12.23□□□□□ -0.45
LDB3-207ENST00000542786 ZNF24P17028 368 aa12.23□□□□□ -0.45
LDB3-207ENST00000542786 FUT6P51993 359 aa12.23□□□□□ -0.45
LDB3-207ENST00000542786 PER3P56645 1201 aa12.23□□□□□ -0.45
LDB3-207ENST00000542786 PDZK1IP1Q13113 114 aa12.23□□□□□ -0.45
LDB3-207ENST00000542786 ARRDC1Q8N5I2 433 aa12.23□□□□□ -0.45
LDB3-207ENST00000542786 C12orf45Q8N5I9 185 aaPredicted RBP12.23□□□□□ -0.45
LDB3-207ENST00000542786 BORCS8Q96FH0 119 aa12.23□□□□□ -0.45
LDB3-207ENST00000542786 GMPPAQ96IJ6 420 aaPredicted RBP12.23□□□□□ -0.45
LDB3-207ENST00000542786 KCNN3Q9UGI6 736 aa12.23□□□□□ -0.45
LDB3-207ENST00000542786 HSF4Q9ULV5 492 aa12.23□□□□□ -0.45
LDB3-207ENST00000542786 CNOT1A5YKK6 2376 aaKnown RBP12.23□□□□□ -0.45
LDB3-207ENST00000542786 TNRC6AQ8NDV7 1962 aaKnown RBP12.23□□□□□ -0.45
LDB3-207ENST00000542786 TRAV17A0A0B4J275 112 aa12.23□□□□□ -0.45
LDB3-207ENST00000542786 PQLC2LA1A4F0 135 aa12.23□□□□□ -0.45
LDB3-207ENST00000542786 C5orf49A4QMS7 147 aa12.23□□□□□ -0.45
LDB3-207ENST00000542786 GOSR2O14653 212 aa12.23□□□□□ -0.45
LDB3-207ENST00000542786 CD79AP11912 226 aa12.23□□□□□ -0.45
LDB3-207ENST00000542786 WNT5AP41221 380 aa12.23□□□□□ -0.45
LDB3-207ENST00000542786 RAB1AP62820 205 aa12.23□□□□□ -0.45
LDB3-207ENST00000542786 ARL6IP1Q15041 203 aa12.23□□□□□ -0.45
LDB3-207ENST00000542786 HIKESHIQ53FT3 197 aa12.23□□□□□ -0.45
LDB3-207ENST00000542786 FAHD2BQ6P2I3 314 aaPredicted RBP12.23□□□□□ -0.45
LDB3-207ENST00000542786 MOB3CQ70IA8 216 aa12.23□□□□□ -0.45
LDB3-207ENST00000542786 ZNF767PQ75MW2 155 aa12.23□□□□□ -0.45
LDB3-207ENST00000542786 C6orf201Q7Z4U5 140 aa12.23□□□□□ -0.45
LDB3-207ENST00000542786 DPPA2Q7Z7J5 298 aa12.23□□□□□ -0.45
LDB3-207ENST00000542786 LYG2Q86SG7 212 aa12.23□□□□□ -0.45
LDB3-207ENST00000542786 UXS1Q8NBZ7 420 aa12.23□□□□□ -0.45
LDB3-207ENST00000542786 Q8NFD4 153 aa12.23□□□□□ -0.45
LDB3-207ENST00000542786 OR56B2PQ8NGI1 322 aa12.23□□□□□ -0.45
LDB3-207ENST00000542786 ASB13Q8WXK3 278 aa12.23□□□□□ -0.45
LDB3-207ENST00000542786 EMG1Q92979 244 aaKnown RBP12.23□□□□□ -0.45
LDB3-207ENST00000542786 APOBEC3DQ96AK3 386 aaPredicted RBP12.23□□□□□ -0.45
LDB3-207ENST00000542786 FAHD2AQ96GK7 314 aa12.23□□□□□ -0.45
LDB3-207ENST00000542786 S100A13Q99584 98 aa12.23□□□□□ -0.45
LDB3-207ENST00000542786 C12orf49Q9H741 205 aa12.23□□□□□ -0.45
LDB3-207ENST00000542786 OSGIN2Q9Y236 505 aa12.23□□□□□ -0.45
LDB3-207ENST00000542786 IGKV1D-8A0A087WSZ0 117 aa12.22□□□□□ -0.45
LDB3-207ENST00000542786 ZNF891A8MT65 544 aaPredicted RBP12.22□□□□□ -0.45
LDB3-207ENST00000542786 F5H5P2 479 aa12.22□□□□□ -0.45
LDB3-207ENST00000542786 EFSO43281 561 aa12.22□□□□□ -0.45
LDB3-207ENST00000542786 HTR3BO95264 441 aa12.22□□□□□ -0.45
LDB3-207ENST00000542786 MPC2O95563 127 aa12.22□□□□□ -0.45
LDB3-207ENST00000542786 CST4P01036 141 aa12.22□□□□□ -0.45
LDB3-207ENST00000542786 NGFP01138 241 aa12.22□□□□□ -0.45
LDB3-207ENST00000542786 HLA-GP17693 338 aa12.22□□□□□ -0.45
LDB3-207ENST00000542786 CXCL2P19875 107 aa12.22□□□□□ -0.45
LDB3-207ENST00000542786 CHATP28329 748 aa12.22□□□□□ -0.45
LDB3-207ENST00000542786 ATP1B3P54709 279 aa12.22□□□□□ -0.45
LDB3-207ENST00000542786 IKZF1Q13422 519 aa12.22□□□□□ -0.45
LDB3-207ENST00000542786 PPP1R1AQ13522 171 aa12.22□□□□□ -0.45
LDB3-207ENST00000542786 ARFRP1Q13795 201 aa12.22□□□□□ -0.45
LDB3-207ENST00000542786 RSU1Q15404 277 aa12.22□□□□□ -0.45
LDB3-207ENST00000542786 PLCXD3Q63HM9 321 aa12.22□□□□□ -0.45
LDB3-207ENST00000542786 PEG10Q86TG7 708 aaKnown RBP12.22□□□□□ -0.45
LDB3-207ENST00000542786 FTMTQ8N4E7 242 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms