RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 PI3P19957 117 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 CD22P20273 847 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 ATP6V0CP27449 155 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 CD34P28906 385 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 PPICP45877 212 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 GPR6P46095 362 aaPredicted RBP3.83□□□□□ -1.8
SNHG1-219ENST00000542112 MTNR1AP48039 350 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 ARRB1P49407 418 aaPredicted RBP3.83□□□□□ -1.8
SNHG1-219ENST00000542112 GNG4P50150 75 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 HNRNPA3P51991 378 aaKnown RBP3.83□□□□□ -1.8
SNHG1-219ENST00000542112 TPPP2P59282 170 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 TAS2R31P59538 309 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 TAS2R20P59543 309 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 TAS2R50P59544 299 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 OSTNP61366 133 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 FKBP1AP62942 108 aaKnown RBP3.83□□□□□ -1.8
SNHG1-219ENST00000542112 SRPXP78539 464 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 LCN2P80188 198 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 DUSP2Q05923 314 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 GAGE5Q13069 117 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 GAGE6Q13070 117 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 MELKQ14680 651 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 RGNQ15493 299 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 TAF13Q15543 124 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 HIST3H3Q16695 136 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 UPP1Q16831 310 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 ARHGAP11BQ3KRB8 267 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 CTXN3Q4LDR2 81 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 GAGE13Q4V321 117 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 TRMT12Q53H54 448 aaKnown RBP3.83□□□□□ -1.8
SNHG1-219ENST00000542112 LY6G6FQ5SQ64 297 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 PHYHD1Q5SRE7 291 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 TPTE2P1Q5T6R2 138 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 HECTD2Q5U5R9 776 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 GFI1BQ5VTD9 330 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 C1QL3Q5VWW1 255 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 ZNF776Q68DI1 518 aaPredicted RBP3.83□□□□□ -1.8
SNHG1-219ENST00000542112 ZNF585AQ6P3V2 769 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 Q6ZVL8 140 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 CHST9Q7L1S5 443 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 S100A7AQ86SG5 101 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 MRGPREQ86SM8 312 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 RTN4RL2Q86UN3 420 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 TMPRSS12Q86WS5 348 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 ZNF280BQ86YH2 543 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 GPD1LQ8N335 351 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 PAQR4Q8N4S7 273 aaPredicted RBP3.83□□□□□ -1.8
SNHG1-219ENST00000542112 OR4K1Q8NGD4 311 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 OR52E1Q8NGJ3 308 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 GPR119Q8TDV5 335 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 TMED6Q8WW62 240 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 CRYGNQ8WXF5 182 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 ASB10Q8WXI3 467 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 IMP4Q96G21 291 aaKnown RBP3.83□□□□□ -1.8
SNHG1-219ENST00000542112 TBX15Q96SF7 602 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 NPY6RQ99463 290 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 ARHGDIGQ99819 225 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 GABRG3Q99928 467 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 CITED1Q99966 193 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 MACROD1Q9BQ69 325 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 SPATA25Q9BR10 227 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 GINS3Q9BRX5 216 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 MRIQ9BWK5 157 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 HINT2Q9BX68 163 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 LINC00470Q9BZP3 86 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 SLC39A8Q9C0K1 460 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 COA1Q9GZY4 146 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 TXNIPQ9H3M7 391 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 TMEM231Q9H6L2 316 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 AKIRIN1Q9H9L7 192 aaPredicted RBP3.83□□□□□ -1.8
SNHG1-219ENST00000542112 RAB18Q9NP72 206 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 A4GALTQ9NPC4 353 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 TMEM9BQ9NQ34 198 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 G6PC2Q9NQR9 355 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 CYTL1Q9NRR1 136 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 LANCL2Q9NS86 450 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 TMEM106BQ9NUM4 274 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 MRPL16Q9NX20 251 aaKnown RBP3.83□□□□□ -1.8
SNHG1-219ENST00000542112 TAS2R16Q9NYV7 291 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 OR6C3Q9NZP0 311 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 MTFP1Q9UDX5 166 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 SERTAD3Q9UJW9 196 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 HHLA2Q9UM44 414 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 FUT9Q9Y231 359 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 HES2Q9Y543 173 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 A0A0G2JMZ2 1700 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 LRRC37A2A6NM11 1700 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 PATJQ8NI35 1801 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 DOCK3Q8IZD9 2030 aa3.83□□□□□ -1.8
SNHG1-219ENST00000542112 LOC285556D6RIA3 1793 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 COL2A1P02458 1487 aaPredicted RBP3.82□□□□□ -1.8
SNHG1-219ENST00000542112 A0A087WV62 115 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 BORCS7-ASMTA0A0B4J1R7 106 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 TRAV34A0A0B4J273 112 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 A0A0G2JK05 382 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 TMEM189A5PLL7 270 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 MAP1LC3B2A6NCE7 125 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 FBLL1A6NHQ2 334 aaKnown RBP3.82□□□□□ -1.8
SNHG1-219ENST00000542112 C4orf47A7E2U8 309 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 H3BQ15 152 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms