RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 GABRG1Q8N1C3 465 aa7.54□□□□□ -1.2
THBS3-210ENST00000541576 ZNF610Q8N9Z0 462 aa7.54□□□□□ -1.2
THBS3-210ENST00000541576 LYZL4Q96KX0 146 aa7.54□□□□□ -1.2
THBS3-210ENST00000541576 ZNF436Q9C0F3 470 aaPredicted RBP7.54□□□□□ -1.2
THBS3-210ENST00000541576 PLEKHA1Q9HB21 404 aa7.54□□□□□ -1.2
THBS3-210ENST00000541576 ABRACLQ9P1F3 81 aa7.54□□□□□ -1.2
THBS3-210ENST00000541576 LOC100509620A0A075B734 347 aa7.54□□□□□ -1.2
THBS3-210ENST00000541576 F12P00748 615 aaPredicted RBP7.54□□□□□ -1.2
THBS3-210ENST00000541576 GLI4P10075 376 aa7.54□□□□□ -1.2
THBS3-210ENST00000541576 CCNOP22674 350 aa7.54□□□□□ -1.2
THBS3-210ENST00000541576 CEACAM8P31997 349 aaPredicted RBP7.54□□□□□ -1.2
THBS3-210ENST00000541576 CBX5P45973 191 aa7.54□□□□□ -1.2
THBS3-210ENST00000541576 RBPJQ06330 500 aa7.54□□□□□ -1.2
THBS3-210ENST00000541576 GABRA6Q16445 453 aa7.54□□□□□ -1.2
THBS3-210ENST00000541576 KDF1Q8NAX2 398 aaPredicted RBP7.54□□□□□ -1.2
THBS3-210ENST00000541576 PLPP7Q8NBV4 271 aa7.54□□□□□ -1.2
THBS3-210ENST00000541576 SFXN3Q9BWM7 321 aa7.54□□□□□ -1.2
THBS3-210ENST00000541576 TAS2R3Q9NYW6 316 aa7.54□□□□□ -1.2
THBS3-210ENST00000541576 TINAGQ9UJW2 476 aa7.54□□□□□ -1.2
THBS3-210ENST00000541576 ZNF835Q9Y2P0 537 aa7.54□□□□□ -1.2
THBS3-210ENST00000541576 TRBV23-1A0A0A0MS06 115 aa7.53□□□□□ -1.2
THBS3-210ENST00000541576 C5orf49A4QMS7 147 aa7.53□□□□□ -1.2
THBS3-210ENST00000541576 TMEM127O75204 238 aa7.53□□□□□ -1.2
THBS3-210ENST00000541576 DHRS3O75911 302 aa7.53□□□□□ -1.2
THBS3-210ENST00000541576 ZP1P60852 638 aa7.53□□□□□ -1.2
THBS3-210ENST00000541576 B2MP61769 119 aa7.53□□□□□ -1.2
THBS3-210ENST00000541576 RIN1Q13671 783 aa7.53□□□□□ -1.2
THBS3-210ENST00000541576 BEND4Q6ZU67 534 aa7.53□□□□□ -1.2
THBS3-210ENST00000541576 MDP1Q86V88 176 aa7.53□□□□□ -1.2
THBS3-210ENST00000541576 C1orf162Q8NEQ5 155 aaPredicted RBP7.53□□□□□ -1.2
THBS3-210ENST00000541576 OR5D14Q8NGL3 314 aa7.53□□□□□ -1.2
THBS3-210ENST00000541576 OR14K1Q8NGZ2 314 aa7.53□□□□□ -1.2
THBS3-210ENST00000541576 NANPQ8TBE9 248 aa7.53□□□□□ -1.2
THBS3-210ENST00000541576 SGK3Q96BR1 496 aa7.53□□□□□ -1.2
THBS3-210ENST00000541576 CYSLTR2Q9NS75 346 aa7.53□□□□□ -1.2
THBS3-210ENST00000541576 MEGF11A6BM72 1044 aa7.53□□□□□ -1.2
THBS3-210ENST00000541576 H7C2Y5 167 aa7.53□□□□□ -1.2
THBS3-210ENST00000541576 CCL2P13500 99 aa7.53□□□□□ -1.2
THBS3-210ENST00000541576 EDN3P14138 238 aa7.53□□□□□ -1.2
THBS3-210ENST00000541576 HOXC12P31275 282 aa7.53□□□□□ -1.2
THBS3-210ENST00000541576 BTCP35070 178 aa7.53□□□□□ -1.2
THBS3-210ENST00000541576 SPOCK1Q08629 439 aa7.53□□□□□ -1.2
THBS3-210ENST00000541576 P2RY6Q15077 328 aa7.53□□□□□ -1.2
THBS3-210ENST00000541576 TSC22D1Q15714 1073 aa7.53□□□□□ -1.2
THBS3-210ENST00000541576 SLC16A13Q7RTY0 426 aa7.53□□□□□ -1.2
THBS3-210ENST00000541576 ZNF584Q8IVC4 421 aa7.53□□□□□ -1.2
THBS3-210ENST00000541576 CCDC54Q8NEL0 328 aa7.53□□□□□ -1.2
THBS3-210ENST00000541576 OR10Z1Q8NGY1 313 aa7.53□□□□□ -1.2
THBS3-210ENST00000541576 OR2AE1Q8NHA4 323 aa7.53□□□□□ -1.2
THBS3-210ENST00000541576 LGALS14Q8TCE9 139 aa7.53□□□□□ -1.2
THBS3-210ENST00000541576 REEP6Q96HR9 211 aa7.53□□□□□ -1.2
THBS3-210ENST00000541576 DMRTA2Q96SC8 542 aa7.53□□□□□ -1.2
THBS3-210ENST00000541576 C1QTNF5Q9BXJ0 243 aa7.53□□□□□ -1.2
THBS3-210ENST00000541576 SH3BGRL2Q9UJC5 107 aa7.53□□□□□ -1.2
THBS3-210ENST00000541576 SFTPCP11686 197 aa7.52□□□□□ -1.21
THBS3-210ENST00000541576 HOXB1P14653 301 aaPredicted RBP7.52□□□□□ -1.21
THBS3-210ENST00000541576 RAB3AP20336 220 aa7.52□□□□□ -1.21
THBS3-210ENST00000541576 ZP3P21754 424 aa7.52□□□□□ -1.21
THBS3-210ENST00000541576 APLNRP35414 380 aa7.52□□□□□ -1.21
THBS3-210ENST00000541576 PMPCAQ10713 525 aa7.52□□□□□ -1.21
THBS3-210ENST00000541576 GLT8D1Q68CQ7 371 aa7.52□□□□□ -1.21
THBS3-210ENST00000541576 CXorf67Q86X51 503 aaPredicted RBP7.52□□□□□ -1.21
THBS3-210ENST00000541576 CBLN2Q8IUK8 224 aa7.52□□□□□ -1.21
THBS3-210ENST00000541576 OR1M1Q8NGA1 313 aa7.52□□□□□ -1.21
THBS3-210ENST00000541576 OR13C9Q8NGT0 318 aa7.52□□□□□ -1.21
THBS3-210ENST00000541576 CPNE2Q96FN4 548 aaPredicted RBP7.52□□□□□ -1.21
THBS3-210ENST00000541576 POM121L2Q96KW2 1035 aa7.52□□□□□ -1.21
THBS3-210ENST00000541576 MRI1Q9BV20 369 aa7.52□□□□□ -1.21
THBS3-210ENST00000541576 RGCCQ9H4X1 137 aa7.52□□□□□ -1.21
THBS3-210ENST00000541576 KLK11Q9UBX7 282 aa7.52□□□□□ -1.21
THBS3-210ENST00000541576 OR5V1Q9UGF6 321 aa7.52□□□□□ -1.21
THBS3-210ENST00000541576 ZNF391Q9UJN7 358 aa7.52□□□□□ -1.21
THBS3-210ENST00000541576 SCP2D1Q9UJQ7 156 aa7.52□□□□□ -1.21
THBS3-210ENST00000541576 A0A1W2PR80 420 aa7.52□□□□□ -1.21
THBS3-210ENST00000541576 SERPINA5P05154 406 aa7.52□□□□□ -1.21
THBS3-210ENST00000541576 NMBP08949 121 aa7.52□□□□□ -1.21
THBS3-210ENST00000541576 CD37P11049 281 aa7.52□□□□□ -1.21
THBS3-210ENST00000541576 PLA2G7Q13093 441 aa7.52□□□□□ -1.21
THBS3-210ENST00000541576 TMEM255AQ5JRV8 349 aa7.52□□□□□ -1.21
THBS3-210ENST00000541576 GLYATL3Q5SZD4 288 aa7.52□□□□□ -1.21
THBS3-210ENST00000541576 COLCA1Q6ZS62 124 aa7.52□□□□□ -1.21
THBS3-210ENST00000541576 PGAP1Q75T13 922 aa7.52□□□□□ -1.21
THBS3-210ENST00000541576 LRRC28Q86X40 367 aaPredicted RBP7.52□□□□□ -1.21
THBS3-210ENST00000541576 NKAIN3Q8N8D7 197 aa7.52□□□□□ -1.21
THBS3-210ENST00000541576 BOD1Q96IK1 185 aa7.52□□□□□ -1.21
THBS3-210ENST00000541576 C20orf85Q9H1P6 137 aa7.52□□□□□ -1.21
THBS3-210ENST00000541576 CGGBP1Q9UFW8 167 aaPredicted RBP7.52□□□□□ -1.21
THBS3-210ENST00000541576 V9GYS6 101 aa7.52□□□□□ -1.21
THBS3-210ENST00000541576 COL6A6A6NMZ7 2263 aa7.52□□□□□ -1.21
THBS3-210ENST00000541576 PRR14LQ5THK1 2151 aa7.52□□□□□ -1.21
THBS3-210ENST00000541576 LOC390937A0A1W2PQ73 354 aa7.52□□□□□ -1.21
THBS3-210ENST00000541576 XRCC2O43543 280 aa7.52□□□□□ -1.21
THBS3-210ENST00000541576 BDKRB2P30411 391 aa7.52□□□□□ -1.21
THBS3-210ENST00000541576 OPRM1P35372 400 aa7.52□□□□□ -1.21
THBS3-210ENST00000541576 GDNFP39905 211 aa7.52□□□□□ -1.21
THBS3-210ENST00000541576 FAM209BQ5JX69 171 aa7.52□□□□□ -1.21
THBS3-210ENST00000541576 CD276Q5ZPR3 534 aa7.52□□□□□ -1.21
THBS3-210ENST00000541576 FAM166AQ6J272 317 aa7.52□□□□□ -1.21
THBS3-210ENST00000541576 Q6ZSR3 168 aa7.52□□□□□ -1.21
THBS3-210ENST00000541576 RNF144BQ7Z419 303 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms