RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 OR10H5Q8NGA6 315 aa9.18□□□□□ -0.94
CHFR-219ENST00000541341 CASTOR1Q8WTX7 329 aa9.18□□□□□ -0.94
CHFR-219ENST00000541341 C8orf44Q96CB5 159 aa9.18□□□□□ -0.94
CHFR-219ENST00000541341 NTNG2Q96CW9 530 aa9.18□□□□□ -0.94
CHFR-219ENST00000541341 C10orf35Q96D05 121 aa9.18□□□□□ -0.94
CHFR-219ENST00000541341 RAB3CQ96E17 227 aa9.18□□□□□ -0.94
CHFR-219ENST00000541341 KTI12Q96EK9 354 aaPredicted RBP9.18□□□□□ -0.94
CHFR-219ENST00000541341 LMF1Q96S06 567 aa9.18□□□□□ -0.94
CHFR-219ENST00000541341 ABHD6Q9BV23 337 aa9.18□□□□□ -0.94
CHFR-219ENST00000541341 SLC5A7Q9GZV3 580 aa9.18□□□□□ -0.94
CHFR-219ENST00000541341 WDR13Q9H1Z4 485 aa9.18□□□□□ -0.94
CHFR-219ENST00000541341 NIT2Q9NQR4 276 aa9.18□□□□□ -0.94
CHFR-219ENST00000541341 SIRT7Q9NRC8 400 aa9.18□□□□□ -0.94
CHFR-219ENST00000541341 CYTL1Q9NRR1 136 aa9.18□□□□□ -0.94
CHFR-219ENST00000541341 TAS2R4Q9NYW5 299 aa9.18□□□□□ -0.94
CHFR-219ENST00000541341 KLHDC2Q9Y2U9 406 aa9.18□□□□□ -0.94
CHFR-219ENST00000541341 NSG2Q9Y328 171 aa9.18□□□□□ -0.94
CHFR-219ENST00000541341 SPTAN1Q13813 2472 aaKnown RBP9.17□□□□□ -0.94
CHFR-219ENST00000541341 HIVEP3Q5T1R4 2406 aa9.17□□□□□ -0.94
CHFR-219ENST00000541341 ELOA3CA0A087WX78 387 aaPredicted RBP9.17□□□□□ -0.94
CHFR-219ENST00000541341 TMEM269A0A1B0GVZ9 245 aa9.17□□□□□ -0.94
CHFR-219ENST00000541341 LOC107986453A0A1B0GWG9 222 aa9.17□□□□□ -0.94
CHFR-219ENST00000541341 TMEM235A6NFC5 223 aa9.17□□□□□ -0.94
CHFR-219ENST00000541341 ZNF729A6NN14 1252 aaPredicted RBP9.17□□□□□ -0.94
CHFR-219ENST00000541341 B4DEV8 164 aa9.17□□□□□ -0.94
CHFR-219ENST00000541341 PSMD9O00233 223 aa9.17□□□□□ -0.94
CHFR-219ENST00000541341 FOXS1O43638 330 aa9.17□□□□□ -0.94
CHFR-219ENST00000541341 FARS2O95363 451 aaKnown RBP9.17□□□□□ -0.94
CHFR-219ENST00000541341 CLDN1O95832 211 aa9.17□□□□□ -0.94
CHFR-219ENST00000541341 IFNA2P01563 188 aa9.17□□□□□ -0.94
CHFR-219ENST00000541341 BGLAPP02818 100 aa9.17□□□□□ -0.94
CHFR-219ENST00000541341 PRF1P14222 555 aa9.17□□□□□ -0.94
CHFR-219ENST00000541341 ADCYAP1P18509 176 aa9.17□□□□□ -0.94
CHFR-219ENST00000541341 RAB5AP20339 215 aa9.17□□□□□ -0.94
CHFR-219ENST00000541341 HRH1P35367 487 aa9.17□□□□□ -0.94
CHFR-219ENST00000541341 KCNJ3P48549 501 aa9.17□□□□□ -0.94
CHFR-219ENST00000541341 EMP2P54851 167 aa9.17□□□□□ -0.94
CHFR-219ENST00000541341 SUMO3P55854 103 aaPredicted RBP9.17□□□□□ -0.94
CHFR-219ENST00000541341 SNRPEP62304 92 aaKnown RBP9.17□□□□□ -0.94
CHFR-219ENST00000541341 SNRPNP63162 240 aaKnown RBP9.17□□□□□ -0.94
CHFR-219ENST00000541341 SRPXP78539 464 aa9.17□□□□□ -0.94
CHFR-219ENST00000541341 PLAURQ03405 335 aa9.17□□□□□ -0.94
CHFR-219ENST00000541341 ATXN7L3Q14CW9 347 aaPredicted RBP9.17□□□□□ -0.94
CHFR-219ENST00000541341 HLA-DQA1Q5Y7H0 255 aa9.17□□□□□ -0.94
CHFR-219ENST00000541341 SGPP2Q8IWX5 399 aa9.17□□□□□ -0.94
CHFR-219ENST00000541341 RBMXL3Q8N7X1 1067 aaKnown RBP9.17□□□□□ -0.94
CHFR-219ENST00000541341 PLPP7Q8NBV4 271 aa9.17□□□□□ -0.94
CHFR-219ENST00000541341 RNASE11Q8TAA1 199 aaKnown RBP9.17□□□□□ -0.94
CHFR-219ENST00000541341 ZNF519Q8TB69 540 aa9.17□□□□□ -0.94
CHFR-219ENST00000541341 FNDC9Q8TBE3 224 aa9.17□□□□□ -0.94
CHFR-219ENST00000541341 ZNRF4Q8WWF5 429 aa9.17□□□□□ -0.94
CHFR-219ENST00000541341 C14orf79Q96F83 325 aa9.17□□□□□ -0.94
CHFR-219ENST00000541341 CMSS1Q9BQ75 279 aaKnown RBP9.17□□□□□ -0.94
CHFR-219ENST00000541341 CRB3Q9BUF7 120 aa9.17□□□□□ -0.94
CHFR-219ENST00000541341 RNF126Q9BV68 326 aa9.17□□□□□ -0.94
CHFR-219ENST00000541341 GPR87Q9BY21 358 aa9.17□□□□□ -0.94
CHFR-219ENST00000541341 SLC26A1Q9H2B4 701 aa9.17□□□□□ -0.94
CHFR-219ENST00000541341 HRH4Q9H3N8 390 aa9.17□□□□□ -0.94
CHFR-219ENST00000541341 KCNJ16Q9NPI9 418 aa9.17□□□□□ -0.94
CHFR-219ENST00000541341 RPS10P5Q9NQ39 176 aa9.17□□□□□ -0.94
CHFR-219ENST00000541341 GSN-AS1Q9NRJ2 163 aa9.17□□□□□ -0.94
CHFR-219ENST00000541341 ZNF230Q9UIE0 474 aaPredicted RBP9.17□□□□□ -0.94
CHFR-219ENST00000541341 B3GALT5Q9Y2C3 310 aa9.17□□□□□ -0.94
CHFR-219ENST00000541341 STARD10Q9Y365 291 aa9.17□□□□□ -0.94
CHFR-219ENST00000541341 MRPS2Q9Y399 296 aaKnown RBP9.17□□□□□ -0.94
CHFR-219ENST00000541341 LRP12Q9Y561 859 aa9.17□□□□□ -0.94
CHFR-219ENST00000541341 ZGRF1Q86YA3 2104 aa9.17□□□□□ -0.94
CHFR-219ENST00000541341 A0A087WWC5 75 aa9.16□□□□□ -0.94
CHFR-219ENST00000541341 IGLV1-36A0A0B4J1U3 117 aa9.16□□□□□ -0.94
CHFR-219ENST00000541341 A0A1B0GX78 115 aa9.16□□□□□ -0.94
CHFR-219ENST00000541341 MEIS3P1A6NDR6 274 aa9.16□□□□□ -0.94
CHFR-219ENST00000541341 TMEM14DPA8MWL7 114 aa9.16□□□□□ -0.94
CHFR-219ENST00000541341 ADAM10O14672 748 aa9.16□□□□□ -0.94
CHFR-219ENST00000541341 SYT7O43581 403 aa9.16□□□□□ -0.94
CHFR-219ENST00000541341 SLC16A7O60669 478 aa9.16□□□□□ -0.94
CHFR-219ENST00000541341 ALOX12BO75342 701 aa9.16□□□□□ -0.94
CHFR-219ENST00000541341 IGKV1D-16P01601 117 aa9.16□□□□□ -0.94
CHFR-219ENST00000541341 KLK3P07288 261 aaPredicted RBP9.16□□□□□ -0.94
CHFR-219ENST00000541341 MUC1P15941 1255 aaPredicted RBP9.16□□□□□ -0.94
CHFR-219ENST00000541341 CPT2P23786 658 aa9.16□□□□□ -0.94
CHFR-219ENST00000541341 CHATP28329 748 aa9.16□□□□□ -0.94
CHFR-219ENST00000541341 IL12BP29460 328 aa9.16□□□□□ -0.94
CHFR-219ENST00000541341 RPL12P30050 165 aaKnown RBP9.16□□□□□ -0.94
CHFR-219ENST00000541341 ALDH3B1P43353 468 aa9.16□□□□□ -0.94
CHFR-219ENST00000541341 NPBWR1P48145 328 aa9.16□□□□□ -0.94
CHFR-219ENST00000541341 CCR4P51679 360 aa9.16□□□□□ -0.94
CHFR-219ENST00000541341 ZNF133P52736 654 aaPredicted RBP9.16□□□□□ -0.94
CHFR-219ENST00000541341 ID2Q02363 134 aa9.16□□□□□ -0.94
CHFR-219ENST00000541341 HABP2Q14520 560 aaPredicted RBP9.16□□□□□ -0.94
CHFR-219ENST00000541341 HIST2H3PS2Q5TEC6 136 aa9.16□□□□□ -0.94
CHFR-219ENST00000541341 C1orf189Q5VU69 101 aa9.16□□□□□ -0.94
CHFR-219ENST00000541341 DPPA3Q6W0C5 159 aa9.16□□□□□ -0.94
CHFR-219ENST00000541341 GRINAQ7Z429 371 aa9.16□□□□□ -0.94
CHFR-219ENST00000541341 ZAR1Q86SH2 424 aa9.16□□□□□ -0.94
CHFR-219ENST00000541341 LYPD6Q86Y78 171 aa9.16□□□□□ -0.94
CHFR-219ENST00000541341 LRRC18Q8N456 261 aa9.16□□□□□ -0.94
CHFR-219ENST00000541341 CISD2Q8N5K1 135 aaKnown RBP9.16□□□□□ -0.94
CHFR-219ENST00000541341 OR4A4PQ8NGN8 299 aa9.16□□□□□ -0.94
CHFR-219ENST00000541341 C16orf52Q8NHV5 167 aa9.16□□□□□ -0.94
CHFR-219ENST00000541341 NANPQ8TBE9 248 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms