RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 TBPP20226 339 aa7.22□□□□□ -1.25
CHD4-208ENST00000540960 CRYGSP22914 178 aa7.22□□□□□ -1.25
CHD4-208ENST00000540960 PRSS3P35030 304 aa7.22□□□□□ -1.25
CHD4-208ENST00000540960 RCVRNP35243 200 aa7.22□□□□□ -1.25
CHD4-208ENST00000540960 APLNRP35414 380 aa7.22□□□□□ -1.25
CHD4-208ENST00000540960 ZNF93P35789 620 aaPredicted RBP7.22□□□□□ -1.25
CHD4-208ENST00000540960 ALDH3B1P43353 468 aa7.22□□□□□ -1.25
CHD4-208ENST00000540960 POU3F4P49335 361 aa7.22□□□□□ -1.25
CHD4-208ENST00000540960 UBE2NP61088 152 aaKnown RBP7.22□□□□□ -1.25
CHD4-208ENST00000540960 ARF1P84077 181 aaKnown RBP7.22□□□□□ -1.25
CHD4-208ENST00000540960 SNTB2Q13425 540 aaKnown RBP7.22□□□□□ -1.25
CHD4-208ENST00000540960 PPA1Q15181 289 aa7.22□□□□□ -1.25
CHD4-208ENST00000540960 BAK1Q16611 211 aa7.22□□□□□ -1.25
CHD4-208ENST00000540960 ODF4Q2M2E3 257 aa7.22□□□□□ -1.25
CHD4-208ENST00000540960 C2orf76Q3KRA6 126 aa7.22□□□□□ -1.25
CHD4-208ENST00000540960 KRTAP27-1Q3LI81 207 aa7.22□□□□□ -1.25
CHD4-208ENST00000540960 C1orf185Q5T7R7 199 aa7.22□□□□□ -1.25
CHD4-208ENST00000540960 TSPO2Q5TGU0 170 aa7.22□□□□□ -1.25
CHD4-208ENST00000540960 FAM166AQ6J272 317 aa7.22□□□□□ -1.25
CHD4-208ENST00000540960 FAM214BQ7L5A3 538 aa7.22□□□□□ -1.25
CHD4-208ENST00000540960 NUFIP2Q7Z417 695 aaKnown RBP7.22□□□□□ -1.25
CHD4-208ENST00000540960 TUSC5Q8IXB3 177 aa7.22□□□□□ -1.25
CHD4-208ENST00000540960 C17orf78Q8N4C9 275 aa7.22□□□□□ -1.25
CHD4-208ENST00000540960 DNAAF1Q8NEP3 725 aa7.22□□□□□ -1.25
CHD4-208ENST00000540960 CSNK2A3Q8NEV1 391 aa7.22□□□□□ -1.25
CHD4-208ENST00000540960 STEAP2Q8NFT2 490 aa7.22□□□□□ -1.25
CHD4-208ENST00000540960 OR6K3Q8NGY3 331 aa7.22□□□□□ -1.25
CHD4-208ENST00000540960 HTRA1Q92743 480 aa7.22□□□□□ -1.25
CHD4-208ENST00000540960 APOBEC3DQ96AK3 386 aaPredicted RBP7.22□□□□□ -1.25
CHD4-208ENST00000540960 FBXO17Q96EF6 278 aa7.22□□□□□ -1.25
CHD4-208ENST00000540960 MRPS24Q96EL2 167 aaKnown RBP7.22□□□□□ -1.25
CHD4-208ENST00000540960 BOD1Q96IK1 185 aa7.22□□□□□ -1.25
CHD4-208ENST00000540960 ALKBH3Q96Q83 286 aaPredicted RBP7.22□□□□□ -1.25
CHD4-208ENST00000540960 GPER1Q99527 375 aa7.22□□□□□ -1.25
CHD4-208ENST00000540960 CHST5Q9GZS9 411 aa7.22□□□□□ -1.25
CHD4-208ENST00000540960 SLC7A10Q9NS82 523 aa7.22□□□□□ -1.25
CHD4-208ENST00000540960 TMEM160Q9NX00 188 aa7.22□□□□□ -1.25
CHD4-208ENST00000540960 EIF3KQ9UBQ5 218 aaKnown RBP7.22□□□□□ -1.25
CHD4-208ENST00000540960 NUBP2Q9Y5Y2 271 aa7.22□□□□□ -1.25
CHD4-208ENST00000540960 CACNG2Q9Y698 323 aa7.22□□□□□ -1.25
CHD4-208ENST00000540960 V9GYS6 101 aa7.22□□□□□ -1.25
CHD4-208ENST00000540960 TMPRSS2O15393 492 aa7.21□□□□□ -1.26
CHD4-208ENST00000540960 PRAF2O60831 178 aa7.21□□□□□ -1.26
CHD4-208ENST00000540960 KDM4BO94953 1096 aa7.21□□□□□ -1.26
CHD4-208ENST00000540960 PSKH1P11801 424 aa7.21□□□□□ -1.26
CHD4-208ENST00000540960 B4GALT1P15291 398 aa7.21□□□□□ -1.26
CHD4-208ENST00000540960 ZNF32P17041 273 aa7.21□□□□□ -1.26
CHD4-208ENST00000540960 AGTR1P30556 359 aa7.21□□□□□ -1.26
CHD4-208ENST00000540960 CBX5P45973 191 aa7.21□□□□□ -1.26
CHD4-208ENST00000540960 TAS2R20P59543 309 aa7.21□□□□□ -1.26
CHD4-208ENST00000540960 PSG4Q00888 419 aa7.21□□□□□ -1.26
CHD4-208ENST00000540960 DBPQ10586 325 aaPredicted RBP7.21□□□□□ -1.26
CHD4-208ENST00000540960 P2RY6Q15077 328 aa7.21□□□□□ -1.26
CHD4-208ENST00000540960 PHYHD1Q5SRE7 291 aa7.21□□□□□ -1.26
CHD4-208ENST00000540960 CLVS2Q5SYC1 327 aa7.21□□□□□ -1.26
CHD4-208ENST00000540960 RSBN1Q5VWQ0 802 aaPredicted RBP7.21□□□□□ -1.26
CHD4-208ENST00000540960 NSUN5P2Q63ZY6 315 aa7.21□□□□□ -1.26
CHD4-208ENST00000540960 LHFPL2Q6ZUX7 228 aa7.21□□□□□ -1.26
CHD4-208ENST00000540960 KRT74Q7RTS7 529 aa7.21□□□□□ -1.26
CHD4-208ENST00000540960 PRSS45Q7RTY3 260 aa7.21□□□□□ -1.26
CHD4-208ENST00000540960 NRARPQ7Z6K4 114 aa7.21□□□□□ -1.26
CHD4-208ENST00000540960 SKA3Q8IX90 412 aa7.21□□□□□ -1.26
CHD4-208ENST00000540960 OR51D1Q8NGF3 324 aa7.21□□□□□ -1.26
CHD4-208ENST00000540960 OR56B1Q8NGI3 324 aa7.21□□□□□ -1.26
CHD4-208ENST00000540960 OR51A4Q8NGJ6 313 aa7.21□□□□□ -1.26
CHD4-208ENST00000540960 OR5H6Q8NGV6 325 aa7.21□□□□□ -1.26
CHD4-208ENST00000540960 OR14K1Q8NGZ2 314 aa7.21□□□□□ -1.26
CHD4-208ENST00000540960 OR10AC1Q8NH08 325 aa7.21□□□□□ -1.26
CHD4-208ENST00000540960 FAM71F1Q96KD3 344 aaPredicted RBP7.21□□□□□ -1.26
CHD4-208ENST00000540960 HS3ST6Q96QI5 342 aa7.21□□□□□ -1.26
CHD4-208ENST00000540960 HIST1H2AAQ96QV6 131 aa7.21□□□□□ -1.26
CHD4-208ENST00000540960 C1QTNF5Q9BXJ0 243 aa7.21□□□□□ -1.26
CHD4-208ENST00000540960 ATG5Q9H1Y0 275 aa7.21□□□□□ -1.26
CHD4-208ENST00000540960 CLCF1Q9UBD9 225 aa7.21□□□□□ -1.26
CHD4-208ENST00000540960 LPAR3Q9UBY5 353 aa7.21□□□□□ -1.26
CHD4-208ENST00000540960 TBC1D24Q9ULP9 559 aa7.21□□□□□ -1.26
CHD4-208ENST00000540960 hCG_2014768A0A024R1R8 64 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 A0A1B0GVG6 124 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 DVL2O14641 736 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 WNT11O96014 354 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 CYB5AP00167 134 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 LPLP06858 475 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 ITGA5P08648 1049 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 GSTP1P09211 210 aaKnown RBP7.2□□□□□ -1.26
CHD4-208ENST00000540960 MMP7P09237 267 aaPredicted RBP7.2□□□□□ -1.26
CHD4-208ENST00000540960 SELEP16581 610 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 CDK2P24941 298 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 HLA-DMAP28067 261 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 COMPP49747 757 aaPredicted RBP7.2□□□□□ -1.26
CHD4-208ENST00000540960 FUT6P51993 359 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 ATP1B3P54709 279 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 SORDQ00796 357 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 SPOCK1Q08629 439 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 FAPQ12884 760 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 MEF2DQ14814 521 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 ZMYND11Q15326 602 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 P2RY14Q15391 338 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 PNLIPRP3Q17RR3 467 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 GSG1Q2KHT4 349 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 TBC1D28Q2M2D7 210 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms