RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 PRRC2AP48634 2157 aaKnown RBP14.8□□□□□ -0.04
CLSTN3-210ENST00000540931 MAP1AP78559 2803 aaPredicted RBP14.79□□□□□ -0.04
CLSTN3-210ENST00000540931 LOC100289279A0A1B0GTE1 492 aa14.79□□□□□ -0.04
CLSTN3-210ENST00000540931 PNMA8CA0A1B0GUJ8 204 aa14.79□□□□□ -0.04
CLSTN3-210ENST00000540931 PQLC2LA1A4F0 135 aa14.79□□□□□ -0.04
CLSTN3-210ENST00000540931 PPIHO43447 177 aaKnown RBP14.79□□□□□ -0.04
CLSTN3-210ENST00000540931 CDC14BO60729 498 aa14.79□□□□□ -0.04
CLSTN3-210ENST00000540931 COL8A2P25067 703 aa14.79□□□□□ -0.04
CLSTN3-210ENST00000540931 AZGP1P25311 298 aaKnown RBP14.79□□□□□ -0.04
CLSTN3-210ENST00000540931 PSMD7P51665 324 aa14.79□□□□□ -0.04
CLSTN3-210ENST00000540931 UBE2V2Q15819 145 aa14.79□□□□□ -0.04
CLSTN3-210ENST00000540931 ACSM3Q53FZ2 586 aa14.79□□□□□ -0.04
CLSTN3-210ENST00000540931 UNQ9370/PRO34162Q6UXP9 181 aa14.79□□□□□ -0.04
CLSTN3-210ENST00000540931 MOGAT3Q86VF5 341 aa14.79□□□□□ -0.04
CLSTN3-210ENST00000540931 NKAIN3Q8N8D7 197 aa14.79□□□□□ -0.04
CLSTN3-210ENST00000540931 PNLDC1Q8NA58 520 aaKnown RBP14.79□□□□□ -0.04
CLSTN3-210ENST00000540931 HPSE2Q8WWQ2 592 aa14.79□□□□□ -0.04
CLSTN3-210ENST00000540931 FOXRED1Q96CU9 486 aaPredicted RBP14.79□□□□□ -0.04
CLSTN3-210ENST00000540931 OR51I2Q9H344 312 aa14.79□□□□□ -0.04
CLSTN3-210ENST00000540931 TCF7L1Q9HCS4 588 aa14.79□□□□□ -0.04
CLSTN3-210ENST00000540931 TRAV38-1A0A0B4J264 116 aa14.78□□□□□ -0.04
CLSTN3-210ENST00000540931 hCG_1807616A0A1W2PRN6 198 aa14.78□□□□□ -0.04
CLSTN3-210ENST00000540931 TRIM64CA6NLI5 447 aa14.78□□□□□ -0.04
CLSTN3-210ENST00000540931 TMEM178BH3BS89 294 aa14.78□□□□□ -0.04
CLSTN3-210ENST00000540931 J3QT63 122 aa14.78□□□□□ -0.04
CLSTN3-210ENST00000540931 RGS9O75916 674 aaPredicted RBP14.78□□□□□ -0.04
CLSTN3-210ENST00000540931 HCKP08631 526 aa14.78□□□□□ -0.04
CLSTN3-210ENST00000540931 MUC1P15941 1255 aaPredicted RBP14.78□□□□□ -0.04
CLSTN3-210ENST00000540931 TGFBR2P37173 567 aa14.78□□□□□ -0.04
CLSTN3-210ENST00000540931 MDH2P40926 338 aaKnown RBP14.78□□□□□ -0.04
CLSTN3-210ENST00000540931 NR4A2P43354 598 aa14.78□□□□□ -0.04
CLSTN3-210ENST00000540931 HAAOP46952 286 aa14.78□□□□□ -0.04
CLSTN3-210ENST00000540931 SOX2P48431 317 aa14.78□□□□□ -0.04
CLSTN3-210ENST00000540931 BMXP51813 675 aa14.78□□□□□ -0.04
CLSTN3-210ENST00000540931 MTCP1P56278 107 aa14.78□□□□□ -0.04
CLSTN3-210ENST00000540931 RPS11P62280 158 aaKnown RBP eCLIP14.78□□□□□ -0.04
CLSTN3-210ENST00000540931 IL24Q13007 206 aa14.78□□□□□ -0.04
CLSTN3-210ENST00000540931 TMEM155Q4W5P6 130 aa14.78□□□□□ -0.04
CLSTN3-210ENST00000540931 ZNF529Q6P280 563 aa14.78□□□□□ -0.04
CLSTN3-210ENST00000540931 FAM90A1Q86YD7 464 aa14.78□□□□□ -0.04
CLSTN3-210ENST00000540931 SPICQ8N5J4 248 aa14.78□□□□□ -0.04
CLSTN3-210ENST00000540931 SCCPDHQ8NBX0 429 aa14.78□□□□□ -0.04
CLSTN3-210ENST00000540931 OR10AC1Q8NH08 325 aa14.78□□□□□ -0.04
CLSTN3-210ENST00000540931 RGP1Q92546 391 aaPredicted RBP14.78□□□□□ -0.04
CLSTN3-210ENST00000540931 C12orf43Q96C57 262 aaKnown RBP14.78□□□□□ -0.04
CLSTN3-210ENST00000540931 Q96MF0 132 aa14.78□□□□□ -0.04
CLSTN3-210ENST00000540931 DERL3Q96Q80 235 aa14.78□□□□□ -0.04
CLSTN3-210ENST00000540931 OR14A2Q96R54 314 aa14.78□□□□□ -0.04
CLSTN3-210ENST00000540931 TMED9Q9BVK6 235 aa14.78□□□□□ -0.04
CLSTN3-210ENST00000540931 C1orf123Q9NWV4 160 aa14.78□□□□□ -0.04
CLSTN3-210ENST00000540931 GSTK1Q9Y2Q3 226 aa14.78□□□□□ -0.04
CLSTN3-210ENST00000540931 PPIAL4EA0A075B759 164 aa14.77□□□□□ -0.05
CLSTN3-210ENST00000540931 TRBV5-7A0A0A0MS05 114 aa14.77□□□□□ -0.05
CLSTN3-210ENST00000540931 FAM230AA0A1W2PPH8 454 aa14.77□□□□□ -0.05
CLSTN3-210ENST00000540931 VWC2LB2RUY7 222 aa14.77□□□□□ -0.05
CLSTN3-210ENST00000540931 PPIAL4DF5H284 164 aa14.77□□□□□ -0.05
CLSTN3-210ENST00000540931 CDIPTO14735 213 aa14.77□□□□□ -0.05
CLSTN3-210ENST00000540931 NOS1APO75052 506 aaPredicted RBP14.77□□□□□ -0.05
CLSTN3-210ENST00000540931 SC5DO75845 299 aa14.77□□□□□ -0.05
CLSTN3-210ENST00000540931 PPIAL4FP0DN26 164 aa14.77□□□□□ -0.05
CLSTN3-210ENST00000540931 CD99P14209 185 aa14.77□□□□□ -0.05
CLSTN3-210ENST00000540931 JUNBP17275 347 aaPredicted RBP14.77□□□□□ -0.05
CLSTN3-210ENST00000540931 MPZP25189 248 aa14.77□□□□□ -0.05
CLSTN3-210ENST00000540931 BDKRB2P30411 391 aa14.77□□□□□ -0.05
CLSTN3-210ENST00000540931 THBS2P35442 1172 aa14.77□□□□□ -0.05
CLSTN3-210ENST00000540931 BTG1P62324 171 aa14.77□□□□□ -0.05
CLSTN3-210ENST00000540931 FIP1L1Q6UN15 594 aaKnown RBP14.77□□□□□ -0.05
CLSTN3-210ENST00000540931 GDPGP1Q6ZNW5 385 aa14.77□□□□□ -0.05
CLSTN3-210ENST00000540931 TGIF2LYQ8IUE0 185 aa14.77□□□□□ -0.05
CLSTN3-210ENST00000540931 SAXO1Q8IYX7 474 aa14.77□□□□□ -0.05
CLSTN3-210ENST00000540931 ZSCAN4Q8NAM6 433 aaPredicted RBP14.77□□□□□ -0.05
CLSTN3-210ENST00000540931 OR13C9Q8NGT0 318 aa14.77□□□□□ -0.05
CLSTN3-210ENST00000540931 YIPF5Q969M3 257 aa14.77□□□□□ -0.05
CLSTN3-210ENST00000540931 MRPS26Q9BYN8 205 aaKnown RBP14.77□□□□□ -0.05
CLSTN3-210ENST00000540931 UFSP2Q9NUQ7 469 aa14.77□□□□□ -0.05
CLSTN3-210ENST00000540931 PPIAL4AQ9Y536 164 aa14.77□□□□□ -0.05
CLSTN3-210ENST00000540931 ZNF469Q96JG9 3925 aaPredicted RBP14.76□□□□□ -0.05
CLSTN3-210ENST00000540931 TRDV1A0A1B0GX56 115 aa14.76□□□□□ -0.05
CLSTN3-210ENST00000540931 H3BSH0 61 aa14.76□□□□□ -0.05
CLSTN3-210ENST00000540931 FOSL1P15407 271 aa14.76□□□□□ -0.05
CLSTN3-210ENST00000540931 USF1P22415 310 aaPredicted RBP14.76□□□□□ -0.05
CLSTN3-210ENST00000540931 LOXL1Q08397 574 aaPredicted RBP14.76□□□□□ -0.05
CLSTN3-210ENST00000540931 NEDD8Q15843 81 aa14.76□□□□□ -0.05
CLSTN3-210ENST00000540931 MICBQ29980 383 aa14.76□□□□□ -0.05
CLSTN3-210ENST00000540931 HSD17B12Q53GQ0 312 aa14.76□□□□□ -0.05
CLSTN3-210ENST00000540931 PRAMEF6Q5VXH4 476 aa14.76□□□□□ -0.05
CLSTN3-210ENST00000540931 HAGHLQ6PII5 290 aaPredicted RBP14.76□□□□□ -0.05
CLSTN3-210ENST00000540931 CD200R1LQ6Q8B3 271 aa14.76□□□□□ -0.05
CLSTN3-210ENST00000540931 WDR82Q6UXN9 313 aa14.76□□□□□ -0.05
CLSTN3-210ENST00000540931 CEACAM19Q7Z692 300 aa14.76□□□□□ -0.05
CLSTN3-210ENST00000540931 AQP3Q92482 292 aa14.76□□□□□ -0.05
CLSTN3-210ENST00000540931 MUL1Q969V5 352 aa14.76□□□□□ -0.05
CLSTN3-210ENST00000540931 RAB39BQ96DA2 213 aa14.76□□□□□ -0.05
CLSTN3-210ENST00000540931 S100A13Q99584 98 aa14.76□□□□□ -0.05
CLSTN3-210ENST00000540931 DNTTIP1Q9H147 329 aa14.76□□□□□ -0.05
CLSTN3-210ENST00000540931 SSR3Q9UNL2 185 aa14.76□□□□□ -0.05
CLSTN3-210ENST00000540931 CHD3Q12873 2000 aaKnown RBP14.75□□□□□ -0.05
CLSTN3-210ENST00000540931 TANC2Q9HCD6 1990 aa14.75□□□□□ -0.05
CLSTN3-210ENST00000540931 A6NIN4 97 aa14.75□□□□□ -0.05
CLSTN3-210ENST00000540931 SRRM5B3KS81 715 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms