RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 DVL1P1P54792 670 aaPredicted RBP10.78□□□□□ -0.68
NPC1-202ENST00000540608 NKAIN1Q4KMZ8 207 aa10.78□□□□□ -0.68
NPC1-202ENST00000540608 SEMA6DQ8NFY4 1073 aa10.78□□□□□ -0.68
NPC1-202ENST00000540608 NPRL2Q8WTW4 380 aa10.78□□□□□ -0.68
NPC1-202ENST00000540608 S100A13Q99584 98 aa10.78□□□□□ -0.68
NPC1-202ENST00000540608 SULT4A1Q9BR01 284 aa10.78□□□□□ -0.68
NPC1-202ENST00000540608 ZNF160Q9HCG1 818 aa10.78□□□□□ -0.68
NPC1-202ENST00000540608 MYOTQ9UBF9 498 aa10.78□□□□□ -0.68
NPC1-202ENST00000540608 IGKV1D-8A0A087WSZ0 117 aa10.77□□□□□ -0.68
NPC1-202ENST00000540608 A0A0U1RQV5 110 aa10.77□□□□□ -0.68
NPC1-202ENST00000540608 AQP7P3A6NL99 342 aa10.77□□□□□ -0.68
NPC1-202ENST00000540608 FAM157AC9JC47 383 aa10.77□□□□□ -0.68
NPC1-202ENST00000540608 C9JQL5 133 aa10.77□□□□□ -0.68
NPC1-202ENST00000540608 DHRS3O75911 302 aa10.77□□□□□ -0.68
NPC1-202ENST00000540608 ZFAND5O76080 213 aa10.77□□□□□ -0.68
NPC1-202ENST00000540608 TIAF1O95411 115 aa10.77□□□□□ -0.68
NPC1-202ENST00000540608 IFNA4P05014 189 aa10.77□□□□□ -0.68
NPC1-202ENST00000540608 CTSDP07339 412 aaPredicted RBP10.77□□□□□ -0.68
NPC1-202ENST00000540608 FCGR2AP12318 317 aa10.77□□□□□ -0.68
NPC1-202ENST00000540608 FOLR2P14207 255 aa10.77□□□□□ -0.68
NPC1-202ENST00000540608 FCGR2CP31995 323 aa10.77□□□□□ -0.68
NPC1-202ENST00000540608 CD80P33681 288 aa10.77□□□□□ -0.68
NPC1-202ENST00000540608 KCNJ3P48549 501 aa10.77□□□□□ -0.68
NPC1-202ENST00000540608 SGPP2Q8IWX5 399 aa10.77□□□□□ -0.68
NPC1-202ENST00000540608 LYPD6BQ8NI32 183 aa10.77□□□□□ -0.68
NPC1-202ENST00000540608 FNDC9Q8TBE3 224 aa10.77□□□□□ -0.68
NPC1-202ENST00000540608 PP6455Q8WZ26 134 aa10.77□□□□□ -0.68
NPC1-202ENST00000540608 PCED1AQ9H1Q7 454 aa10.77□□□□□ -0.68
NPC1-202ENST00000540608 SMCO4Q9NRQ5 59 aa10.77□□□□□ -0.68
NPC1-202ENST00000540608 HDGFL3Q9Y3E1 203 aa10.77□□□□□ -0.68
NPC1-202ENST00000540608 HOXB1P14653 301 aaPredicted RBP10.77□□□□□ -0.69
NPC1-202ENST00000540608 B2MP61769 119 aa10.77□□□□□ -0.69
NPC1-202ENST00000540608 FAM3AP98173 230 aa10.77□□□□□ -0.69
NPC1-202ENST00000540608 SMCO1Q147U7 214 aa10.77□□□□□ -0.69
NPC1-202ENST00000540608 TMEM176BQ3YBM2 270 aaPredicted RBP10.77□□□□□ -0.69
NPC1-202ENST00000540608 OPN5Q6U736 354 aa10.77□□□□□ -0.69
NPC1-202ENST00000540608 GALNTL5Q7Z4T8 443 aa10.77□□□□□ -0.69
NPC1-202ENST00000540608 SULF2Q8IWU5 870 aa10.77□□□□□ -0.69
NPC1-202ENST00000540608 SLC25A43Q8WUT9 341 aaPredicted RBP10.77□□□□□ -0.69
NPC1-202ENST00000540608 HAS2Q92819 552 aa10.77□□□□□ -0.69
NPC1-202ENST00000540608 KIRREL1Q96J84 757 aa10.77□□□□□ -0.69
NPC1-202ENST00000540608 PRRX2Q99811 253 aa10.77□□□□□ -0.69
NPC1-202ENST00000540608 ZNF2Q9BSG1 426 aaPredicted RBP10.77□□□□□ -0.69
NPC1-202ENST00000540608 IFT22Q9H7X7 185 aa10.77□□□□□ -0.69
NPC1-202ENST00000540608 RNF122Q9H9V4 155 aa10.77□□□□□ -0.69
NPC1-202ENST00000540608 DECR2Q9NUI1 292 aa10.77□□□□□ -0.69
NPC1-202ENST00000540608 ZNF701Q9NV72 531 aaPredicted RBP10.77□□□□□ -0.69
NPC1-202ENST00000540608 MCTS1Q9ULC4 181 aaKnown RBP10.77□□□□□ -0.69
NPC1-202ENST00000540608 CRYM-AS1A6NIL9 109 aa10.77□□□□□ -0.69
NPC1-202ENST00000540608 DHRS7CA6NNS2 312 aa10.77□□□□□ -0.69
NPC1-202ENST00000540608 AGPAT2O15120 278 aa10.77□□□□□ -0.69
NPC1-202ENST00000540608 OR2J2O76002 312 aa10.77□□□□□ -0.69
NPC1-202ENST00000540608 IFNA21P01568 189 aa10.77□□□□□ -0.69
NPC1-202ENST00000540608 KLK2P20151 261 aa10.77□□□□□ -0.69
NPC1-202ENST00000540608 PAX6P26367 422 aa10.77□□□□□ -0.69
NPC1-202ENST00000540608 FKBP2P26885 142 aaKnown RBP10.77□□□□□ -0.69
NPC1-202ENST00000540608 SFTPDP35247 375 aa10.77□□□□□ -0.69
NPC1-202ENST00000540608 GUCA1AP43080 201 aaPredicted RBP10.77□□□□□ -0.69
NPC1-202ENST00000540608 MEOX2P50222 304 aa10.77□□□□□ -0.69
NPC1-202ENST00000540608 TMEM33P57088 247 aa10.77□□□□□ -0.69
NPC1-202ENST00000540608 SLC35A1P78382 337 aa10.77□□□□□ -0.69
NPC1-202ENST00000540608 DHRS11Q6UWP2 260 aa10.77□□□□□ -0.69
NPC1-202ENST00000540608 Q6ZSR3 168 aa10.77□□□□□ -0.69
NPC1-202ENST00000540608 GJC3Q8NFK1 279 aa10.77□□□□□ -0.69
NPC1-202ENST00000540608 CHST5Q9GZS9 411 aa10.77□□□□□ -0.69
NPC1-202ENST00000540608 FBXL17Q9UF56 701 aa10.77□□□□□ -0.69
NPC1-202ENST00000540608 AMDHD2Q9Y303 409 aa10.77□□□□□ -0.69
NPC1-202ENST00000540608 RALGAPA1Q6GYQ0 2036 aa10.76□□□□□ -0.69
NPC1-202ENST00000540608 F5H5K5 113 aa10.76□□□□□ -0.69
NPC1-202ENST00000540608 FAHP16930 419 aa10.76□□□□□ -0.69
NPC1-202ENST00000540608 MSR1P21757 451 aa10.76□□□□□ -0.69
NPC1-202ENST00000540608 EIF1P41567 113 aaKnown RBP10.76□□□□□ -0.69
NPC1-202ENST00000540608 CLDN17P56750 224 aa10.76□□□□□ -0.69
NPC1-202ENST00000540608 S100A12P80511 92 aa10.76□□□□□ -0.69
NPC1-202ENST00000540608 ZNF574Q6ZN55 896 aaPredicted RBP10.76□□□□□ -0.69
NPC1-202ENST00000540608 Q6ZRG5 221 aa10.76□□□□□ -0.69
NPC1-202ENST00000540608 C6orf201Q7Z4U5 140 aa10.76□□□□□ -0.69
NPC1-202ENST00000540608 CPEB2Q7Z5Q1 589 aaKnown RBP10.76□□□□□ -0.69
NPC1-202ENST00000540608 C2CD4CQ8TF44 421 aa10.76□□□□□ -0.69
NPC1-202ENST00000540608 SFT2D1Q8WV19 159 aa10.76□□□□□ -0.69
NPC1-202ENST00000540608 EGLN1Q9GZT9 426 aa10.76□□□□□ -0.69
NPC1-202ENST00000540608 ELL3Q9HB65 397 aaPredicted RBP10.76□□□□□ -0.69
NPC1-202ENST00000540608 PLEKHJ1Q9NW61 149 aa10.76□□□□□ -0.69
NPC1-202ENST00000540608 CACFD1Q9UGQ2 172 aa10.76□□□□□ -0.69
NPC1-202ENST00000540608 ATPIF1Q9UII2 106 aa10.76□□□□□ -0.69
NPC1-202ENST00000540608 TIMM10BQ9Y5J6 103 aa10.76□□□□□ -0.69
NPC1-202ENST00000540608 BCAT2O15382 392 aaPredicted RBP10.76□□□□□ -0.69
NPC1-202ENST00000540608 NR2C1P13056 603 aa10.76□□□□□ -0.69
NPC1-202ENST00000540608 HMGN3Q15651 99 aa10.76□□□□□ -0.69
NPC1-202ENST00000540608 GGNBP1Q5YKI7 109 aa10.76□□□□□ -0.69
NPC1-202ENST00000540608 ZFP82Q8N141 532 aa10.76□□□□□ -0.69
NPC1-202ENST00000540608 C15orf54Q8N8G6 183 aa10.76□□□□□ -0.69
NPC1-202ENST00000540608 WDSUB1Q8N9V3 476 aa10.76□□□□□ -0.69
NPC1-202ENST00000540608 UBAC2Q8NBM4 344 aa10.76□□□□□ -0.69
NPC1-202ENST00000540608 C10orf35Q96D05 121 aa10.76□□□□□ -0.69
NPC1-202ENST00000540608 PLEKHA2Q9HB19 425 aa10.76□□□□□ -0.69
NPC1-202ENST00000540608 EDARQ9UNE0 448 aa10.76□□□□□ -0.69
NPC1-202ENST00000540608 PIGLQ9Y2B2 252 aa10.76□□□□□ -0.69
NPC1-202ENST00000540608 TNRC18O15417 2968 aaPredicted RBP10.76□□□□□ -0.69
NPC1-202ENST00000540608 APOC1P02654 83 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms