RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 LIME1Q9H400 295 aa12.36□□□□□ -0.43
INO80E-203ENST00000540562 DUX4Q9UBX2 424 aa12.36□□□□□ -0.43
INO80E-203ENST00000540562 MTRF1O75570 445 aaKnown RBP12.36□□□□□ -0.43
INO80E-203ENST00000540562 SFT2D2O95562 160 aa12.36□□□□□ -0.43
INO80E-203ENST00000540562 IL2RAP01589 272 aa12.36□□□□□ -0.43
INO80E-203ENST00000540562 PVALBP20472 110 aaPredicted RBP12.36□□□□□ -0.43
INO80E-203ENST00000540562 NTF4P34130 210 aa12.36□□□□□ -0.43
INO80E-203ENST00000540562 RBMXP38159 391 aaKnown RBP12.36□□□□□ -0.43
INO80E-203ENST00000540562 CXCL12P48061 93 aa12.36□□□□□ -0.43
INO80E-203ENST00000540562 HGFACQ04756 655 aa12.36□□□□□ -0.43
INO80E-203ENST00000540562 SLC25A47Q6Q0C1 308 aa12.36□□□□□ -0.43
INO80E-203ENST00000540562 CADM4Q8NFZ8 388 aa12.36□□□□□ -0.43
INO80E-203ENST00000540562 RAB33BQ9H082 229 aa12.36□□□□□ -0.43
INO80E-203ENST00000540562 CHCHD2Q9Y6H1 151 aaPredicted RBP12.36□□□□□ -0.43
INO80E-203ENST00000540562 MFNGO00587 321 aa12.36□□□□□ -0.43
INO80E-203ENST00000540562 OMGP23515 440 aa12.36□□□□□ -0.43
INO80E-203ENST00000540562 LPAR6P43657 344 aa12.36□□□□□ -0.43
INO80E-203ENST00000540562 HLA-BQ31612 363 aa12.36□□□□□ -0.43
INO80E-203ENST00000540562 CLRN3Q8NCR9 226 aa12.36□□□□□ -0.43
INO80E-203ENST00000540562 NECAB3Q96P71 396 aaPredicted RBP12.36□□□□□ -0.43
INO80E-203ENST00000540562 CMSS1Q9BQ75 279 aaKnown RBP12.36□□□□□ -0.43
INO80E-203ENST00000540562 PIGQQ9BRB3 760 aa12.36□□□□□ -0.43
INO80E-203ENST00000540562 CEP192Q8TEP8 1941 aa12.35□□□□□ -0.43
INO80E-203ENST00000540562 MSR1P21757 451 aa12.35□□□□□ -0.43
INO80E-203ENST00000540562 PPT1P50897 306 aa12.35□□□□□ -0.43
INO80E-203ENST00000540562 RSU1Q15404 277 aa12.35□□□□□ -0.43
INO80E-203ENST00000540562 LPCAT3Q6P1A2 487 aa12.35□□□□□ -0.43
INO80E-203ENST00000540562 DOK3Q7L591 496 aa12.35□□□□□ -0.43
INO80E-203ENST00000540562 SRXN1Q9BYN0 137 aa12.35□□□□□ -0.43
INO80E-203ENST00000540562 PRDM6Q9NQX0 595 aa12.35□□□□□ -0.43
INO80E-203ENST00000540562 A0A096LPE4 126 aa12.35□□□□□ -0.43
INO80E-203ENST00000540562 A0A0J9YW62 118 aa12.35□□□□□ -0.43
INO80E-203ENST00000540562 A0A1W2PPZ6 126 aa12.35□□□□□ -0.43
INO80E-203ENST00000540562 GEMIN2O14893 280 aaKnown RBP12.35□□□□□ -0.43
INO80E-203ENST00000540562 SLC25A4P12235 298 aa12.35□□□□□ -0.43
INO80E-203ENST00000540562 MUC1P15941 1255 aaPredicted RBP12.35□□□□□ -0.43
INO80E-203ENST00000540562 RSPO1Q2MKA7 263 aaPredicted RBP12.35□□□□□ -0.43
INO80E-203ENST00000540562 WDR74Q6RFH5 385 aaPredicted RBP12.35□□□□□ -0.43
INO80E-203ENST00000540562 FAM180AQ6UWF9 173 aa12.35□□□□□ -0.43
INO80E-203ENST00000540562 SULF2Q8IWU5 870 aa12.35□□□□□ -0.43
INO80E-203ENST00000540562 HSD17B11Q8NBQ5 300 aa12.35□□□□□ -0.43
INO80E-203ENST00000540562 MAFAQ8NHW3 353 aaPredicted RBP12.35□□□□□ -0.43
INO80E-203ENST00000540562 CYTL1Q9NRR1 136 aa12.35□□□□□ -0.43
INO80E-203ENST00000540562 SLC2A8Q9NY64 477 aa12.35□□□□□ -0.43
INO80E-203ENST00000540562 ZNF629Q9UEG4 869 aaPredicted RBP12.35□□□□□ -0.43
INO80E-203ENST00000540562 C14orf166Q9Y224 244 aaKnown RBP12.35□□□□□ -0.43
INO80E-203ENST00000540562 C9JQL5 133 aa12.34□□□□□ -0.43
INO80E-203ENST00000540562 TLX3O43711 291 aaPredicted RBP12.34□□□□□ -0.43
INO80E-203ENST00000540562 CHRM2P08172 466 aa12.34□□□□□ -0.43
INO80E-203ENST00000540562 C5orf46Q6UWT4 87 aa12.34□□□□□ -0.43
INO80E-203ENST00000540562 OR6X1Q8NH79 312 aa12.34□□□□□ -0.43
INO80E-203ENST00000540562 OR14L1PQ8NHC6 308 aa12.34□□□□□ -0.43
INO80E-203ENST00000540562 PIGCQ92535 297 aa12.34□□□□□ -0.43
INO80E-203ENST00000540562 MARS2Q96GW9 593 aaKnown RBP12.34□□□□□ -0.43
INO80E-203ENST00000540562 TAF9BQ9HBM6 251 aa12.34□□□□□ -0.43
INO80E-203ENST00000540562 P4HTMQ9NXG6 502 aa12.34□□□□□ -0.43
INO80E-203ENST00000540562 TTLL8A6PVC2 850 aa12.34□□□□□ -0.43
INO80E-203ENST00000540562 MELTFP08582 738 aa12.34□□□□□ -0.43
INO80E-203ENST00000540562 ENDOGQ14249 297 aaKnown RBP12.34□□□□□ -0.43
INO80E-203ENST00000540562 HNF4GQ14541 408 aa12.34□□□□□ -0.43
INO80E-203ENST00000540562 ZNF345Q14585 488 aa12.34□□□□□ -0.43
INO80E-203ENST00000540562 RABEPKQ7Z6M1 372 aa12.34□□□□□ -0.43
INO80E-203ENST00000540562 DTWD2Q8NBA8 298 aa12.34□□□□□ -0.43
INO80E-203ENST00000540562 FGFBP3Q8TAT2 258 aa12.34□□□□□ -0.43
INO80E-203ENST00000540562 ARL11Q969Q4 196 aa12.34□□□□□ -0.43
INO80E-203ENST00000540562 ISOC2Q96AB3 205 aa12.34□□□□□ -0.43
INO80E-203ENST00000540562 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.34□□□□□ -0.43
INO80E-203ENST00000540562 CCDC187A0A096LP49 1063 aa12.34□□□□□ -0.43
INO80E-203ENST00000540562 AQP7P3A6NL99 342 aa12.34□□□□□ -0.43
INO80E-203ENST00000540562 H7C2Y5 167 aa12.34□□□□□ -0.43
INO80E-203ENST00000540562 RFPL3SP0C7P2 107 aa12.34□□□□□ -0.43
INO80E-203ENST00000540562 CFPP27918 469 aa12.34□□□□□ -0.43
INO80E-203ENST00000540562 KCNJ3P48549 501 aa12.34□□□□□ -0.43
INO80E-203ENST00000540562 PIGPP57054 158 aa12.34□□□□□ -0.43
INO80E-203ENST00000540562 UBALD1Q8TB05 177 aa12.34□□□□□ -0.43
INO80E-203ENST00000540562 EDAQ92838 391 aa12.34□□□□□ -0.43
INO80E-203ENST00000540562 ERGIC1Q969X5 290 aa12.34□□□□□ -0.43
INO80E-203ENST00000540562 AKR1E2Q96JD6 320 aa12.34□□□□□ -0.43
INO80E-203ENST00000540562 PIGMQ9H3S5 423 aa12.34□□□□□ -0.43
INO80E-203ENST00000540562 MRPS17Q9Y2R5 130 aaKnown RBP12.34□□□□□ -0.43
INO80E-203ENST00000540562 AMDHD2Q9Y303 409 aa12.34□□□□□ -0.43
INO80E-203ENST00000540562 TTC28Q96AY4 2481 aa12.33□□□□□ -0.44
INO80E-203ENST00000540562 CXCL13O43927 109 aa12.33□□□□□ -0.44
INO80E-203ENST00000540562 OR8U9P0C7N5 309 aa12.33□□□□□ -0.44
INO80E-203ENST00000540562 OR5H8P0DN80 308 aa12.33□□□□□ -0.44
INO80E-203ENST00000540562 WIPI1Q5MNZ9 446 aaPredicted RBP12.33□□□□□ -0.44
INO80E-203ENST00000540562 OR8U1Q8NH10 309 aa12.33□□□□□ -0.44
INO80E-203ENST00000540562 RNF141Q8WVD5 230 aa12.33□□□□□ -0.44
INO80E-203ENST00000540562 ZNF845Q96IR2 970 aaPredicted RBP12.33□□□□□ -0.44
INO80E-203ENST00000540562 CNTNAP3BQ96NU0 1288 aa12.33□□□□□ -0.44
INO80E-203ENST00000540562 RHOFQ9HBH0 211 aa12.33□□□□□ -0.44
INO80E-203ENST00000540562 IGKV1-27A0A075B6S5 117 aa12.33□□□□□ -0.44
INO80E-203ENST00000540562 MSTNO14793 375 aa12.33□□□□□ -0.44
INO80E-203ENST00000540562 DHHO43323 396 aa12.33□□□□□ -0.44
INO80E-203ENST00000540562 OR5AC1P0C628 307 aa12.33□□□□□ -0.44
INO80E-203ENST00000540562 HTR5AP47898 357 aa12.33□□□□□ -0.44
INO80E-203ENST00000540562 LYSMD4Q5XG99 296 aa12.33□□□□□ -0.44
INO80E-203ENST00000540562 CRIP3Q6Q6R5 217 aa12.33□□□□□ -0.44
INO80E-203ENST00000540562 LYZL2Q7Z4W2 148 aa12.33□□□□□ -0.44
INO80E-203ENST00000540562 SGK3Q96BR1 496 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms