RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 ELFN2Q5R3F8 820 aa8.88□□□□□ -0.99
TRAF1-202ENST00000540010 CBLN2Q8IUK8 224 aa8.88□□□□□ -0.99
TRAF1-202ENST00000540010 ARHGAP5-AS1Q96IT6 56 aa8.88□□□□□ -0.99
TRAF1-202ENST00000540010 MESP1Q9BRJ9 268 aa8.88□□□□□ -0.99
TRAF1-202ENST00000540010 ZNF426Q9BUY5 554 aa8.88□□□□□ -0.99
TRAF1-202ENST00000540010 TMPRSS13Q9BYE2 586 aa8.88□□□□□ -0.99
TRAF1-202ENST00000540010 SAMD10Q9BYL1 202 aa8.88□□□□□ -0.99
TRAF1-202ENST00000540010 DNAJB11Q9UBS4 358 aa8.88□□□□□ -0.99
TRAF1-202ENST00000540010 AK3Q9UIJ7 227 aa8.88□□□□□ -0.99
TRAF1-202ENST00000540010 PIGBOS1A0A0B4J2F0 54 aa8.87□□□□□ -0.99
TRAF1-202ENST00000540010 RNASEK-C17orf49H0YIS7 233 aa8.87□□□□□ -0.99
TRAF1-202ENST00000540010 KCNAB3O43448 404 aa8.87□□□□□ -0.99
TRAF1-202ENST00000540010 MSR1P21757 451 aa8.87□□□□□ -0.99
TRAF1-202ENST00000540010 F2RL1P55085 397 aa8.87□□□□□ -0.99
TRAF1-202ENST00000540010 ZNF239Q16600 458 aaKnown RBP8.87□□□□□ -0.99
TRAF1-202ENST00000540010 TRILQ7L0X0 811 aa8.87□□□□□ -0.99
TRAF1-202ENST00000540010 MAML2Q8IZL2 1156 aaPredicted RBP8.87□□□□□ -0.99
TRAF1-202ENST00000540010 ZPLD1Q8TCW7 415 aa8.87□□□□□ -0.99
TRAF1-202ENST00000540010 RXFP4Q8TDU9 374 aa8.87□□□□□ -0.99
TRAF1-202ENST00000540010 BCO1Q9HAY6 547 aa8.87□□□□□ -0.99
TRAF1-202ENST00000540010 PATZ1Q9HBE1 687 aaKnown RBP8.87□□□□□ -0.99
TRAF1-202ENST00000540010 MMP24Q9Y5R2 645 aa8.87□□□□□ -0.99
TRAF1-202ENST00000540010 C7orf66A4D0T2 115 aa8.87□□□□□ -0.99
TRAF1-202ENST00000540010 M0R296 226 aa8.87□□□□□ -0.99
TRAF1-202ENST00000540010 SPRY1O43609 319 aaPredicted RBP8.87□□□□□ -0.99
TRAF1-202ENST00000540010 HBE1P02100 147 aa8.87□□□□□ -0.99
TRAF1-202ENST00000540010 DUSP1P28562 367 aa8.87□□□□□ -0.99
TRAF1-202ENST00000540010 EIF1P41567 113 aaKnown RBP8.87□□□□□ -0.99
TRAF1-202ENST00000540010 EFNB2P52799 333 aa8.87□□□□□ -0.99
TRAF1-202ENST00000540010 NANOS3P60323 173 aaKnown RBP8.87□□□□□ -0.99
TRAF1-202ENST00000540010 Q5BKY6 102 aa8.87□□□□□ -0.99
TRAF1-202ENST00000540010 THEM4Q5T1C6 240 aa8.87□□□□□ -0.99
TRAF1-202ENST00000540010 CLEC9AQ6UXN8 241 aa8.87□□□□□ -0.99
TRAF1-202ENST00000540010 RPS19BP1Q86WX3 136 aaKnown RBP8.87□□□□□ -0.99
TRAF1-202ENST00000540010 CNEP1R1Q8N9A8 125 aa8.87□□□□□ -0.99
TRAF1-202ENST00000540010 NUBPLQ8TB37 319 aa8.87□□□□□ -0.99
TRAF1-202ENST00000540010 PISDQ9UG56 409 aa8.87□□□□□ -0.99
TRAF1-202ENST00000540010 NOSIPQ9Y314 301 aaKnown RBP8.87□□□□□ -0.99
TRAF1-202ENST00000540010 NBASA2RRP1 2371 aa8.87□□□□□ -0.99
TRAF1-202ENST00000540010 TRAV20A0A0B4J274 112 aa8.87□□□□□ -0.99
TRAF1-202ENST00000540010 RAB27BO00194 218 aa8.87□□□□□ -0.99
TRAF1-202ENST00000540010 SSSCA1O60232 199 aa8.87□□□□□ -0.99
TRAF1-202ENST00000540010 TSPAN2O60636 221 aa8.87□□□□□ -0.99
TRAF1-202ENST00000540010 EIF1BO60739 113 aaKnown RBP8.87□□□□□ -0.99
TRAF1-202ENST00000540010 AQP8O94778 261 aa8.87□□□□□ -0.99
TRAF1-202ENST00000540010 SCAF4O95104 1147 aaKnown RBP8.87□□□□□ -0.99
TRAF1-202ENST00000540010 CCL4P13236 92 aa8.87□□□□□ -0.99
TRAF1-202ENST00000540010 SSR4P51571 173 aa8.87□□□□□ -0.99
TRAF1-202ENST00000540010 KLF9Q13886 244 aaPredicted RBP8.87□□□□□ -0.99
TRAF1-202ENST00000540010 LINC00696Q6ZRV3 163 aa8.87□□□□□ -0.99
TRAF1-202ENST00000540010 OR5AP2Q8NGF4 316 aa8.87□□□□□ -0.99
TRAF1-202ENST00000540010 OR4D10Q8NGI6 311 aa8.87□□□□□ -0.99
TRAF1-202ENST00000540010 OIT3Q8WWZ8 545 aa8.87□□□□□ -0.99
TRAF1-202ENST00000540010 TMEM68Q96MH6 324 aa8.87□□□□□ -0.99
TRAF1-202ENST00000540010 PRELID3BQ9Y3B1 194 aa8.87□□□□□ -0.99
TRAF1-202ENST00000540010 SHISA3A0PJX4 238 aa8.86□□□□□ -0.99
TRAF1-202ENST00000540010 GDF9O60383 454 aa8.86□□□□□ -0.99
TRAF1-202ENST00000540010 MPLP40238 635 aa8.86□□□□□ -0.99
TRAF1-202ENST00000540010 SLC25A1P53007 311 aa8.86□□□□□ -0.99
TRAF1-202ENST00000540010 C19orf48Q6RUI8 117 aa8.86□□□□□ -0.99
TRAF1-202ENST00000540010 NECAP1Q8NC96 275 aa8.86□□□□□ -0.99
TRAF1-202ENST00000540010 CMTM3Q96MX0 182 aa8.86□□□□□ -0.99
TRAF1-202ENST00000540010 HAO2Q9NYQ3 351 aa8.86□□□□□ -0.99
TRAF1-202ENST00000540010 ELF5Q9UKW6 265 aaPredicted RBP8.86□□□□□ -0.99
TRAF1-202ENST00000540010 LY6G6EA0A0G2JKS1 128 aa8.86□□□□□ -0.99
TRAF1-202ENST00000540010 TAAR5O14804 337 aa8.86□□□□□ -0.99
TRAF1-202ENST00000540010 ZNF205O95201 554 aa8.86□□□□□ -0.99
TRAF1-202ENST00000540010 ENPP1P22413 925 aa8.86□□□□□ -0.99
TRAF1-202ENST00000540010 TAS2R30P59541 319 aa8.86□□□□□ -0.99
TRAF1-202ENST00000540010 IL11RAQ14626 422 aa8.86□□□□□ -0.99
TRAF1-202ENST00000540010 ESPL1Q14674 2120 aa8.86□□□□□ -0.99
TRAF1-202ENST00000540010 OR2B11Q5JQS5 317 aa8.86□□□□□ -0.99
TRAF1-202ENST00000540010 LINC00114Q6XXX2 140 aa8.86□□□□□ -0.99
TRAF1-202ENST00000540010 DPPA2Q7Z7J5 298 aa8.86□□□□□ -0.99
TRAF1-202ENST00000540010 CNTD2Q9H8S5 307 aa8.86□□□□□ -0.99
TRAF1-202ENST00000540010 NDRG3Q9UGV2 375 aa8.86□□□□□ -0.99
TRAF1-202ENST00000540010 U3KQA8 63 aa8.86□□□□□ -0.99
TRAF1-202ENST00000540010 A0A096LPE4 126 aa8.86□□□□□ -0.99
TRAF1-202ENST00000540010 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.86□□□□□ -0.99
TRAF1-202ENST00000540010 A0A1W2PPZ6 126 aa8.86□□□□□ -0.99
TRAF1-202ENST00000540010 C9orf170A2RU37 121 aa8.86□□□□□ -0.99
TRAF1-202ENST00000540010 LINC00862A6NCI5 91 aa8.86□□□□□ -0.99
TRAF1-202ENST00000540010 HLA-HP01893 362 aa8.86□□□□□ -0.99
TRAF1-202ENST00000540010 SFTA3P0C7M3 94 aa8.86□□□□□ -0.99
TRAF1-202ENST00000540010 ZNF133P52736 654 aaPredicted RBP8.86□□□□□ -0.99
TRAF1-202ENST00000540010 GAS1P54826 345 aa8.86□□□□□ -0.99
TRAF1-202ENST00000540010 HBG1P69891 147 aa8.86□□□□□ -0.99
TRAF1-202ENST00000540010 HBG2P69892 147 aa8.86□□□□□ -0.99
TRAF1-202ENST00000540010 BVESQ8NE79 360 aa8.86□□□□□ -0.99
TRAF1-202ENST00000540010 OR5M9Q8NGP3 310 aa8.86□□□□□ -0.99
TRAF1-202ENST00000540010 FGF11Q92914 225 aa8.86□□□□□ -0.99
TRAF1-202ENST00000540010 ADAT1Q9BUB4 502 aaKnown RBP8.86□□□□□ -0.99
TRAF1-202ENST00000540010 GPR160Q9UJ42 338 aa8.86□□□□□ -0.99
TRAF1-202ENST00000540010 GPR179Q6PRD1 2367 aa8.86□□□□□ -0.99
TRAF1-202ENST00000540010 IGKV1D-42A0A075B6H8 117 aa8.86□□□□□ -0.99
TRAF1-202ENST00000540010 OR4C45A6NMZ5 311 aa8.86□□□□□ -0.99
TRAF1-202ENST00000540010 HMSDA8MTL9 139 aa8.86□□□□□ -0.99
TRAF1-202ENST00000540010 AGFG1P52594 562 aaKnown RBP8.86□□□□□ -0.99
TRAF1-202ENST00000540010 ERVK-16P61578 105 aa8.86□□□□□ -0.99
TRAF1-202ENST00000540010 HTD2P86397 168 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms